RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 DISP3Q9P2K9 1392 aa26.31■■□□□ 1.8
BRF1-215ENST00000549655 NRXN1Q9ULB1 1477 aa26.31■■□□□ 1.8
BRF1-215ENST00000549655 PIK3C2BO00750 1634 aa26.3■■□□□ 1.8
BRF1-215ENST00000549655 CCDC184Q52MB2 194 aa26.3■■□□□ 1.8
BRF1-215ENST00000549655 AGLP35573 1532 aa26.3■■□□□ 1.8
BRF1-215ENST00000549655 TMF1P82094 1093 aa26.29■■□□□ 1.8
BRF1-215ENST00000549655 CFAP70Q5T0N1 1121 aa26.29■■□□□ 1.8
BRF1-215ENST00000549655 PPLO60437 1756 aa26.27■■□□□ 1.8
BRF1-215ENST00000549655 RPGRIP1LQ68CZ1 1315 aa26.26■■□□□ 1.8
BRF1-215ENST00000549655 CNGB1Q14028 1251 aaPredicted RBP26.24■■□□□ 1.79
BRF1-215ENST00000549655 MRS2Q9HD23 443 aa26.24■■□□□ 1.79
BRF1-215ENST00000549655 EIF3AQ14152 1382 aaKnown RBP26.23■■□□□ 1.79
BRF1-215ENST00000549655 PPP6R1Q9UPN7 881 aa26.23■■□□□ 1.79
BRF1-215ENST00000549655 PREX1Q8TCU6 1659 aa26.23■■□□□ 1.79
BRF1-215ENST00000549655 ARHGEF40Q8TER5 1519 aa26.23■■□□□ 1.79
BRF1-215ENST00000549655 IDI1Q13907 227 aa26.22■■□□□ 1.79
BRF1-215ENST00000549655 SLC52A1Q9NWF4 448 aa26.22■■□□□ 1.79
BRF1-215ENST00000549655 PIK3C2GO75747 1445 aa26.2■■□□□ 1.78
BRF1-215ENST00000549655 SETBP1Q9Y6X0 1596 aa26.16■■□□□ 1.78
BRF1-215ENST00000549655 FBXO31Q5XUX0 539 aaPredicted RBP26.16■■□□□ 1.78
BRF1-215ENST00000549655 C14orf93Q9H972 538 aaKnown RBP26.16■■□□□ 1.78
BRF1-215ENST00000549655 NEXMIFQ5QGS0 1516 aa26.16■■□□□ 1.78
BRF1-215ENST00000549655 HNRNPUQ00839 825 aaKnown RBP eCLIP26.15■■□□□ 1.78
BRF1-215ENST00000549655 CLTCQ00610 1675 aaKnown RBP26.14■■□□□ 1.78
BRF1-215ENST00000549655 VGFO15240 615 aaPredicted RBP26.14■■□□□ 1.77
BRF1-215ENST00000549655 PER1O15534 1290 aaPredicted RBP26.14■■□□□ 1.77
BRF1-215ENST00000549655 MLECQ14165 292 aa26.14■■□□□ 1.77
BRF1-215ENST00000549655 CDCA8Q53HL2 280 aa26.14■■□□□ 1.77
BRF1-215ENST00000549655 FAM9BQ8IZU0 186 aa26.14■■□□□ 1.77
BRF1-215ENST00000549655 ERVK-7P63135 1459 aa26.14■■□□□ 1.77
BRF1-215ENST00000549655 KTN1Q86UP2 1357 aaKnown RBP26.14■■□□□ 1.77
BRF1-215ENST00000549655 RALBP1Q15311 655 aa26.12■■□□□ 1.77
BRF1-215ENST00000549655 PANK3Q9H999 370 aa26.12■■□□□ 1.77
BRF1-215ENST00000549655 NUTM2DQ5VT03 806 aaPredicted RBP26.11■■□□□ 1.77
BRF1-215ENST00000549655 TMEM131LA2VDJ0 1609 aa26.11■■□□□ 1.77
BRF1-215ENST00000549655 MYO5BQ9ULV0 1848 aa26.1■■□□□ 1.77
BRF1-215ENST00000549655 ADGRB1O14514 1584 aa26.09■■□□□ 1.77
BRF1-215ENST00000549655 SLC24A1O60721 1099 aa26.09■■□□□ 1.77
BRF1-215ENST00000549655 MYBBP1AQ9BQG0 1328 aaKnown RBP26.07■■□□□ 1.76
BRF1-215ENST00000549655 MYO3AQ8NEV4 1616 aa26.07■■□□□ 1.76
BRF1-215ENST00000549655 ZFYVE9O95405 1425 aa26.06■■□□□ 1.76
BRF1-215ENST00000549655 TMEM132EQ6IEE7 984 aa26.06■■□□□ 1.76
BRF1-215ENST00000549655 PARD3Q8TEW0 1356 aa26.05■■□□□ 1.76
BRF1-215ENST00000549655 TRAK1Q9UPV9 953 aa26.04■■□□□ 1.76
BRF1-215ENST00000549655 SPATA31D1Q6ZQQ2 1576 aa26.03■■□□□ 1.76
BRF1-215ENST00000549655 TMC1Q8TDI8 760 aa26.03■■□□□ 1.76
BRF1-215ENST00000549655 CENPJQ9HC77 1338 aaPredicted RBP26.03■■□□□ 1.76
BRF1-215ENST00000549655 KDM5AP29375 1690 aaKnown RBP26.02■■□□□ 1.76
BRF1-215ENST00000549655 SBNO2Q9Y2G9 1366 aa26.02■■□□□ 1.76
BRF1-215ENST00000549655 ESF1Q9H501 851 aaKnown RBP26.02■■□□□ 1.76
BRF1-215ENST00000549655 BRD4O60885 1362 aaPredicted RBP26.01■■□□□ 1.75
BRF1-215ENST00000549655 STAG3Q9UJ98 1225 aa26■■□□□ 1.75
BRF1-215ENST00000549655 CC2D1BQ5T0F9 858 aaKnown RBP25.99■■□□□ 1.75
BRF1-215ENST00000549655 MYOM1P52179 1685 aa25.99■■□□□ 1.75
BRF1-215ENST00000549655 PNISRQ8TF01 805 aaKnown RBP25.98■■□□□ 1.75
BRF1-215ENST00000549655 ZMYM3Q14202 1370 aa25.97■■□□□ 1.75
BRF1-215ENST00000549655 NLRP13Q86W25 1043 aa25.96■■□□□ 1.75
BRF1-215ENST00000549655 KNSTRNQ9Y448 316 aa25.96■■□□□ 1.75
BRF1-215ENST00000549655 QRICH2Q9H0J4 1663 aa25.95■■□□□ 1.74
BRF1-215ENST00000549655 A2ML1A8K2U0 1454 aa25.93■■□□□ 1.74
BRF1-215ENST00000549655 ZBED9Q6R2W3 1325 aa25.92■■□□□ 1.74
BRF1-215ENST00000549655 SENP3Q9H4L4 574 aaPredicted RBP25.92■■□□□ 1.74
BRF1-215ENST00000549655 TRHP20396 242 aaPredicted RBP25.91■■□□□ 1.74
BRF1-215ENST00000549655 ARHGEF28Q8N1W1 1705 aaKnown RBP25.91■■□□□ 1.74
BRF1-215ENST00000549655 AMER1Q5JTC6 1135 aaPredicted RBP25.89■■□□□ 1.74
BRF1-215ENST00000549655 ASXL1Q8IXJ9 1541 aa25.89■■□□□ 1.74
BRF1-215ENST00000549655 SUPT16HQ9Y5B9 1047 aaKnown RBP25.87■■□□□ 1.73
BRF1-215ENST00000549655 LRPPRCP42704 1394 aaKnown RBP25.87■■□□□ 1.73
BRF1-215ENST00000549655 RIMS2Q9UQ26 1411 aa25.85■■□□□ 1.73
BRF1-215ENST00000549655 STK26Q9P289 416 aa25.85■■□□□ 1.73
BRF1-215ENST00000549655 ALKQ9UM73 1620 aa25.84■■□□□ 1.73
BRF1-215ENST00000549655 NPC1L1Q9UHC9 1359 aa25.83■■□□□ 1.73
BRF1-215ENST00000549655 TNRQ92752 1358 aa25.82■■□□□ 1.72
BRF1-215ENST00000549655 YTHDC2Q9H6S0 1430 aaKnown RBP25.81■■□□□ 1.72
BRF1-215ENST00000549655 EVC2Q86UK5 1308 aa25.81■■□□□ 1.72
BRF1-215ENST00000549655 CARD14Q9BXL6 1004 aa25.8■■□□□ 1.72
BRF1-215ENST00000549655 PUS7Q96PZ0 661 aaKnown RBP25.78■■□□□ 1.72
BRF1-215ENST00000549655 TULP4Q9NRJ4 1543 aa25.78■■□□□ 1.72
BRF1-215ENST00000549655 SAFB2Q14151 953 aaKnown RBP eCLIP25.78■■□□□ 1.72
BRF1-215ENST00000549655 PTPRMP28827 1452 aa25.78■■□□□ 1.72
BRF1-215ENST00000549655 PPP2R1AP30153 589 aa25.76■■□□□ 1.72
BRF1-215ENST00000549655 NEFLP07196 543 aa25.76■■□□□ 1.71
BRF1-215ENST00000549655 FKBP8Q14318 412 aa25.76■■□□□ 1.71
BRF1-215ENST00000549655 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.76■■□□□ 1.71
BRF1-215ENST00000549655 SLC12A5Q9H2X9 1139 aa25.76■■□□□ 1.71
BRF1-215ENST00000549655 PRAM1Q96QH2 718 aa25.74■■□□□ 1.71
BRF1-215ENST00000549655 POGKQ9P215 609 aa25.73■■□□□ 1.71
BRF1-215ENST00000549655 SETD1AO15047 1707 aaKnown RBP25.71■■□□□ 1.71
BRF1-215ENST00000549655 HDGFP51858 240 aaKnown RBP25.71■■□□□ 1.71
BRF1-215ENST00000549655 CABP2Q9NPB3 220 aa25.71■■□□□ 1.71
BRF1-215ENST00000549655 SENP3-EIF4A1A0A087X0R7 540 aa25.7■■□□□ 1.7
BRF1-215ENST00000549655 UBR1Q8IWV7 1749 aa25.7■■□□□ 1.7
BRF1-215ENST00000549655 CEBPAP49715 358 aaPredicted RBP25.69■■□□□ 1.7
BRF1-215ENST00000549655 NSD3Q9BZ95 1437 aa25.69■■□□□ 1.7
BRF1-215ENST00000549655 NRXN3Q9Y4C0 1643 aa25.69■■□□□ 1.7
BRF1-215ENST00000549655 MINK1Q8N4C8 1332 aaPredicted RBP25.68■■□□□ 1.7
BRF1-215ENST00000549655 INSRP06213 1382 aa25.67■■□□□ 1.7
BRF1-215ENST00000549655 TMEM2Q9UHN6 1383 aa25.67■■□□□ 1.7
BRF1-215ENST00000549655 SRPK2P78362 688 aaKnown RBP25.65■■□□□ 1.7
BRF1-215ENST00000549655 DLC1Q96QB1 1528 aa25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms