RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 NWD1Q149M9 1564 aa13.58□□□□□ -0.23
SMARCD1-207ENST00000549526 YY1P25490 414 aa13.58□□□□□ -0.24
SMARCD1-207ENST00000549526 PIK3C2BO00750 1634 aa13.57□□□□□ -0.24
SMARCD1-207ENST00000549526 CEP152O94986 1710 aa13.57□□□□□ -0.24
SMARCD1-207ENST00000549526 ADAMTS2O95450 1211 aa13.56□□□□□ -0.24
SMARCD1-207ENST00000549526 LRRC59Q96AG4 307 aaKnown RBP13.56□□□□□ -0.24
SMARCD1-207ENST00000549526 C19orf44Q9H6X5 657 aa13.56□□□□□ -0.24
SMARCD1-207ENST00000549526 CHD2O14647 1828 aaKnown RBP13.55□□□□□ -0.24
SMARCD1-207ENST00000549526 TSPY4P0CV99 314 aa13.55□□□□□ -0.24
SMARCD1-207ENST00000549526 TSPY10P0CW01 314 aa13.55□□□□□ -0.24
SMARCD1-207ENST00000549526 RSPH4AQ5TD94 716 aa13.55□□□□□ -0.24
SMARCD1-207ENST00000549526 BRINP3Q76B58 766 aa13.55□□□□□ -0.24
SMARCD1-207ENST00000549526 USP21Q9UK80 565 aa13.55□□□□□ -0.24
SMARCD1-207ENST00000549526 TRPC5Q9UL62 973 aaPredicted RBP13.55□□□□□ -0.24
SMARCD1-207ENST00000549526 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.55□□□□□ -0.24
SMARCD1-207ENST00000549526 CCDC141Q6ZP82 1450 aa13.55□□□□□ -0.24
SMARCD1-207ENST00000549526 EFCAB6Q5THR3 1501 aa13.53□□□□□ -0.24
SMARCD1-207ENST00000549526 DEFB132Q7Z7B7 95 aa13.52□□□□□ -0.25
SMARCD1-207ENST00000549526 MTUS2Q5JR59 1369 aa13.52□□□□□ -0.25
SMARCD1-207ENST00000549526 SETD5Q9C0A6 1442 aa13.52□□□□□ -0.25
SMARCD1-207ENST00000549526 NCOA3Q9Y6Q9 1424 aa13.52□□□□□ -0.25
SMARCD1-207ENST00000549526 FYCO1Q9BQS8 1478 aa13.52□□□□□ -0.25
SMARCD1-207ENST00000549526 CAMSAP2Q08AD1 1489 aa13.51□□□□□ -0.25
SMARCD1-207ENST00000549526 PSDA5PKW4 1024 aaPredicted RBP13.51□□□□□ -0.25
SMARCD1-207ENST00000549526 IDI1Q13907 227 aa13.51□□□□□ -0.25
SMARCD1-207ENST00000549526 SF3B2Q13435 895 aaKnown RBP13.5□□□□□ -0.25
SMARCD1-207ENST00000549526 MAST1Q9Y2H9 1570 aa13.49□□□□□ -0.25
SMARCD1-207ENST00000549526 HRCP23327 699 aa13.49□□□□□ -0.25
SMARCD1-207ENST00000549526 BLMP54132 1417 aaPredicted RBP13.48□□□□□ -0.25
SMARCD1-207ENST00000549526 PNPLA6Q8IY17 1366 aa13.47□□□□□ -0.25
SMARCD1-207ENST00000549526 ARHGAP31Q2M1Z3 1444 aa13.47□□□□□ -0.25
SMARCD1-207ENST00000549526 MROH1Q8NDA8 1641 aa13.46□□□□□ -0.25
SMARCD1-207ENST00000549526 ASXL1Q8IXJ9 1541 aa13.46□□□□□ -0.25
SMARCD1-207ENST00000549526 DDX17Q92841 729 aaKnown RBP13.46□□□□□ -0.25
SMARCD1-207ENST00000549526 EIF2AK4Q9P2K8 1649 aaKnown RBP13.46□□□□□ -0.26
SMARCD1-207ENST00000549526 PPP1R15AO75807 674 aaPredicted RBP13.45□□□□□ -0.26
SMARCD1-207ENST00000549526 FNBP4Q8N3X1 1017 aaPredicted RBP13.45□□□□□ -0.26
SMARCD1-207ENST00000549526 NHSL1Q5SYE7 1610 aa13.45□□□□□ -0.26
SMARCD1-207ENST00000549526 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.44□□□□□ -0.26
SMARCD1-207ENST00000549526 ATRNO75882 1429 aa13.44□□□□□ -0.26
SMARCD1-207ENST00000549526 TBX22Q9Y458 520 aa13.43□□□□□ -0.26
SMARCD1-207ENST00000549526 HDGFP51858 240 aaKnown RBP13.42□□□□□ -0.26
SMARCD1-207ENST00000549526 SENP3-EIF4A1A0A087X0R7 540 aa13.41□□□□□ -0.26
SMARCD1-207ENST00000549526 GJD4Q96KN9 370 aaPredicted RBP13.41□□□□□ -0.26
SMARCD1-207ENST00000549526 PLEKHG1Q9ULL1 1385 aa13.41□□□□□ -0.26
SMARCD1-207ENST00000549526 ARHGEF5Q12774 1597 aa13.4□□□□□ -0.26
SMARCD1-207ENST00000549526 ADGRB3O60242 1522 aa13.38□□□□□ -0.27
SMARCD1-207ENST00000549526 DCAF8L1A6NGE4 600 aa13.37□□□□□ -0.27
SMARCD1-207ENST00000549526 AMOTL2Q9Y2J4 779 aa13.37□□□□□ -0.27
SMARCD1-207ENST00000549526 PTCH1Q13635 1447 aa13.37□□□□□ -0.27
SMARCD1-207ENST00000549526 R3HDM1Q15032 1099 aaKnown RBP13.36□□□□□ -0.27
SMARCD1-207ENST00000549526 SLC52A1Q9NWF4 448 aa13.36□□□□□ -0.27
SMARCD1-207ENST00000549526 DCCP43146 1447 aa13.36□□□□□ -0.27
SMARCD1-207ENST00000549526 MST1RQ04912 1400 aa13.36□□□□□ -0.27
SMARCD1-207ENST00000549526 CEP162Q5TB80 1403 aa13.36□□□□□ -0.27
SMARCD1-207ENST00000549526 BRWD3Q6RI45 1802 aa13.36□□□□□ -0.27
SMARCD1-207ENST00000549526 MYO5BQ9ULV0 1848 aa13.36□□□□□ -0.27
SMARCD1-207ENST00000549526 BCL9LQ86UU0 1499 aa13.36□□□□□ -0.27
SMARCD1-207ENST00000549526 KANK1Q14678 1352 aa13.35□□□□□ -0.27
SMARCD1-207ENST00000549526 EHBP1L1Q8N3D4 1523 aa13.35□□□□□ -0.27
SMARCD1-207ENST00000549526 BAG6P46379 1132 aa13.35□□□□□ -0.27
SMARCD1-207ENST00000549526 RIMS2Q9UQ26 1411 aa13.34□□□□□ -0.27
SMARCD1-207ENST00000549526 DUOX2Q9NRD8 1548 aa13.34□□□□□ -0.27
SMARCD1-207ENST00000549526 UNC13BO14795 1591 aa13.33□□□□□ -0.28
SMARCD1-207ENST00000549526 ZFYVE9O95405 1425 aa13.33□□□□□ -0.28
SMARCD1-207ENST00000549526 PIK3R4Q99570 1358 aa13.32□□□□□ -0.28
SMARCD1-207ENST00000549526 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.32□□□□□ -0.28
SMARCD1-207ENST00000549526 ADAMTS13Q76LX8 1427 aa13.3□□□□□ -0.28
SMARCD1-207ENST00000549526 RRP7BPQ9NSQ0 103 aa13.3□□□□□ -0.28
SMARCD1-207ENST00000549526 CHGAP10645 457 aaKnown RBP13.29□□□□□ -0.28
SMARCD1-207ENST00000549526 SEPT12Q8IYM1 358 aa13.29□□□□□ -0.28
SMARCD1-207ENST00000549526 SPHKAPQ2M3C7 1700 aa13.29□□□□□ -0.28
SMARCD1-207ENST00000549526 MARF1Q9Y4F3 1742 aaKnown RBP13.29□□□□□ -0.28
SMARCD1-207ENST00000549526 SOS2Q07890 1332 aaPredicted RBP13.29□□□□□ -0.28
SMARCD1-207ENST00000549526 NOS1P29475 1434 aa13.29□□□□□ -0.28
SMARCD1-207ENST00000549526 EN1Q05925 392 aaPredicted RBP13.28□□□□□ -0.28
SMARCD1-207ENST00000549526 KRT27Q7Z3Y8 459 aa13.28□□□□□ -0.28
SMARCD1-207ENST00000549526 UNC5CLQ8IV45 518 aa13.28□□□□□ -0.28
SMARCD1-207ENST00000549526 RALGAPBQ86X10 1494 aa13.28□□□□□ -0.28
SMARCD1-207ENST00000549526 GCC2Q8IWJ2 1684 aa13.28□□□□□ -0.28
SMARCD1-207ENST00000549526 ZNF784Q8NCA9 323 aaPredicted RBP13.27□□□□□ -0.29
SMARCD1-207ENST00000549526 PTPRUQ92729 1446 aa13.27□□□□□ -0.29
SMARCD1-207ENST00000549526 TRPM2O94759 1503 aa13.27□□□□□ -0.29
SMARCD1-207ENST00000549526 GLI3P10071 1580 aa13.27□□□□□ -0.29
SMARCD1-207ENST00000549526 C1QTNF8P60827 252 aa13.26□□□□□ -0.29
SMARCD1-207ENST00000549526 KIF15Q9NS87 1388 aa13.26□□□□□ -0.29
SMARCD1-207ENST00000549526 COL22A1Q8NFW1 1626 aaPredicted RBP13.25□□□□□ -0.29
SMARCD1-207ENST00000549526 ERBINQ96RT1 1412 aa13.25□□□□□ -0.29
SMARCD1-207ENST00000549526 ORAI2Q96SN7 254 aa13.25□□□□□ -0.29
SMARCD1-207ENST00000549526 TMEM131LA2VDJ0 1609 aa13.24□□□□□ -0.29
SMARCD1-207ENST00000549526 PPP1R1BQ9UD71 204 aaPredicted RBP13.24□□□□□ -0.29
SMARCD1-207ENST00000549526 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.24□□□□□ -0.29
SMARCD1-207ENST00000549526 LAMC1P11047 1609 aa13.23□□□□□ -0.29
SMARCD1-207ENST00000549526 LMTK2Q8IWU2 1503 aa13.23□□□□□ -0.29
SMARCD1-207ENST00000549526 C1orf167Q5SNV9 1468 aa13.23□□□□□ -0.29
SMARCD1-207ENST00000549526 A0A0G2JS52 829 aa13.22□□□□□ -0.29
SMARCD1-207ENST00000549526 MYT1Q01538 1121 aa13.22□□□□□ -0.29
SMARCD1-207ENST00000549526 CCDC9Q9Y3X0 531 aaKnown RBP13.22□□□□□ -0.29
SMARCD1-207ENST00000549526 MYOM2P54296 1465 aa13.21□□□□□ -0.3
SMARCD1-207ENST00000549526 ADGRL3Q9HAR2 1447 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms