RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 MAP3K4Q9Y6R4 1608 aa25.03■■□□□ 1.6
PRPF40B-208ENST00000548436 FRMPD1Q5SYB0 1578 aa25.03■■□□□ 1.6
PRPF40B-208ENST00000548436 CC2D1BQ5T0F9 858 aaKnown RBP25.02■■□□□ 1.6
PRPF40B-208ENST00000548436 MLH3Q9UHC1 1453 aa25.02■■□□□ 1.6
PRPF40B-208ENST00000548436 HECW2Q9P2P5 1572 aa25.02■■□□□ 1.6
PRPF40B-208ENST00000548436 PPP4R2Q9NY27 417 aa25■■□□□ 1.59
PRPF40B-208ENST00000548436 CFAP65Q6ZU64 1925 aaKnown RBP25■■□□□ 1.59
PRPF40B-208ENST00000548436 ABCA6Q8N139 1617 aa24.99■■□□□ 1.59
PRPF40B-208ENST00000548436 MYOM2P54296 1465 aa24.99■■□□□ 1.59
PRPF40B-208ENST00000548436 ADGRF5Q8IZF2 1346 aa24.96■■□□□ 1.59
PRPF40B-208ENST00000548436 CFAP70Q5T0N1 1121 aa24.94■■□□□ 1.58
PRPF40B-208ENST00000548436 SYNMO15061 1565 aa24.94■■□□□ 1.58
PRPF40B-208ENST00000548436 MYOM1P52179 1685 aa24.94■■□□□ 1.58
PRPF40B-208ENST00000548436 RNF123Q5XPI4 1314 aa24.93■■□□□ 1.58
PRPF40B-208ENST00000548436 EIF3AQ14152 1382 aaKnown RBP24.92■■□□□ 1.58
PRPF40B-208ENST00000548436 NPATQ14207 1427 aa24.92■■□□□ 1.58
PRPF40B-208ENST00000548436 ADGRB3O60242 1522 aa24.92■■□□□ 1.58
PRPF40B-208ENST00000548436 NEO1Q92859 1461 aa24.91■■□□□ 1.58
PRPF40B-208ENST00000548436 GGT6Q6P531 493 aa24.91■■□□□ 1.58
PRPF40B-208ENST00000548436 NRXN1Q9ULB1 1477 aa24.91■■□□□ 1.58
PRPF40B-208ENST00000548436 CDCA8Q53HL2 280 aa24.9■■□□□ 1.58
PRPF40B-208ENST00000548436 KDM5AP29375 1690 aaKnown RBP24.89■■□□□ 1.57
PRPF40B-208ENST00000548436 RAPGEF3O95398 923 aa24.89■■□□□ 1.57
PRPF40B-208ENST00000548436 RBM19Q9Y4C8 960 aaKnown RBP24.88■■□□□ 1.57
PRPF40B-208ENST00000548436 ABCC3O15438 1527 aa24.87■■□□□ 1.57
PRPF40B-208ENST00000548436 B4GALNT3Q6L9W6 998 aa24.87■■□□□ 1.57
PRPF40B-208ENST00000548436 KNSTRNQ9Y448 316 aa24.87■■□□□ 1.57
PRPF40B-208ENST00000548436 PPLO60437 1756 aa24.87■■□□□ 1.57
PRPF40B-208ENST00000548436 NOS1P29475 1434 aa24.86■■□□□ 1.57
PRPF40B-208ENST00000548436 AMER1Q5JTC6 1135 aaPredicted RBP24.85■■□□□ 1.57
PRPF40B-208ENST00000548436 SALL2Q9Y467 1007 aaPredicted RBP24.84■■□□□ 1.57
PRPF40B-208ENST00000548436 BLMP54132 1417 aaPredicted RBP24.84■■□□□ 1.57
PRPF40B-208ENST00000548436 CAMSAP1Q5T5Y3 1602 aa24.84■■□□□ 1.57
PRPF40B-208ENST00000548436 RICTORQ6R327 1708 aa24.84■■□□□ 1.57
PRPF40B-208ENST00000548436 DIP2CQ9Y2E4 1556 aa24.84■■□□□ 1.57
PRPF40B-208ENST00000548436 SIGLEC1Q9BZZ2 1709 aa24.83■■□□□ 1.57
PRPF40B-208ENST00000548436 ZMYM4Q5VZL5 1548 aa24.83■■□□□ 1.57
PRPF40B-208ENST00000548436 INSRP06213 1382 aa24.83■■□□□ 1.57
PRPF40B-208ENST00000548436 CHGAP10645 457 aaKnown RBP24.83■■□□□ 1.57
PRPF40B-208ENST00000548436 ERVK-7P63135 1459 aa24.83■■□□□ 1.56
PRPF40B-208ENST00000548436 MYO3AQ8NEV4 1616 aa24.82■■□□□ 1.56
PRPF40B-208ENST00000548436 ASXL1Q8IXJ9 1541 aa24.82■■□□□ 1.56
PRPF40B-208ENST00000548436 SETBP1Q9Y6X0 1596 aa24.8■■□□□ 1.56
PRPF40B-208ENST00000548436 PPP2R1AP30153 589 aa24.79■■□□□ 1.56
PRPF40B-208ENST00000548436 PIK3C2GO75747 1445 aa24.77■■□□□ 1.56
PRPF40B-208ENST00000548436 PDE3BQ13370 1112 aa24.77■■□□□ 1.56
PRPF40B-208ENST00000548436 SLC24A1O60721 1099 aa24.76■■□□□ 1.55
PRPF40B-208ENST00000548436 PIK3C2BO00750 1634 aa24.75■■□□□ 1.55
PRPF40B-208ENST00000548436 NPC1L1Q9UHC9 1359 aa24.75■■□□□ 1.55
PRPF40B-208ENST00000548436 C14orf93Q9H972 538 aaKnown RBP24.73■■□□□ 1.55
PRPF40B-208ENST00000548436 ADAMTS8Q9UP79 889 aa24.73■■□□□ 1.55
PRPF40B-208ENST00000548436 ZC3H13Q5T200 1668 aaKnown RBP24.73■■□□□ 1.55
PRPF40B-208ENST00000548436 SBNO2Q9Y2G9 1366 aa24.73■■□□□ 1.55
PRPF40B-208ENST00000548436 CDCA7LQ96GN5 454 aa24.73■■□□□ 1.55
PRPF40B-208ENST00000548436 ADGRB1O14514 1584 aa24.72■■□□□ 1.55
PRPF40B-208ENST00000548436 YEATS2Q9ULM3 1422 aa24.72■■□□□ 1.55
PRPF40B-208ENST00000548436 RPGRIP1LQ68CZ1 1315 aa24.71■■□□□ 1.55
PRPF40B-208ENST00000548436 RCAN3Q9UKA8 241 aa24.7■■□□□ 1.54
PRPF40B-208ENST00000548436 QRICH2Q9H0J4 1663 aa24.7■■□□□ 1.54
PRPF40B-208ENST00000548436 CENPJQ9HC77 1338 aaPredicted RBP24.7■■□□□ 1.54
PRPF40B-208ENST00000548436 GLI2P10070 1586 aa24.7■■□□□ 1.54
PRPF40B-208ENST00000548436 RRP1P56182 461 aaKnown RBP24.69■■□□□ 1.54
PRPF40B-208ENST00000548436 TRAK1Q9UPV9 953 aa24.69■■□□□ 1.54
PRPF40B-208ENST00000548436 DIP2BQ9P265 1576 aa24.69■■□□□ 1.54
PRPF40B-208ENST00000548436 CARD14Q9BXL6 1004 aa24.68■■□□□ 1.54
PRPF40B-208ENST00000548436 ARHGAP31Q2M1Z3 1444 aa24.67■■□□□ 1.54
PRPF40B-208ENST00000548436 TMEM132EQ6IEE7 984 aa24.66■■□□□ 1.54
PRPF40B-208ENST00000548436 NEXMIFQ5QGS0 1516 aa24.66■■□□□ 1.54
PRPF40B-208ENST00000548436 WDR43Q15061 677 aaKnown RBP eCLIP24.65■■□□□ 1.54
PRPF40B-208ENST00000548436 CCDC136Q96JN2 1154 aa24.65■■□□□ 1.54
PRPF40B-208ENST00000548436 MYO5BQ9ULV0 1848 aa24.63■■□□□ 1.53
PRPF40B-208ENST00000548436 NUTM2DQ5VT03 806 aaPredicted RBP24.63■■□□□ 1.53
PRPF40B-208ENST00000548436 FAM69CQ0P6D2 419 aa24.62■■□□□ 1.53
PRPF40B-208ENST00000548436 KIF13AQ9H1H9 1805 aa24.61■■□□□ 1.53
PRPF40B-208ENST00000548436 IDI1Q13907 227 aa24.6■■□□□ 1.53
PRPF40B-208ENST00000548436 PREX1Q8TCU6 1659 aa24.6■■□□□ 1.53
PRPF40B-208ENST00000548436 ARHGEF28Q8N1W1 1705 aaKnown RBP24.59■■□□□ 1.53
PRPF40B-208ENST00000548436 PLEKHH1Q9ULM0 1364 aa24.59■■□□□ 1.53
PRPF40B-208ENST00000548436 VGFO15240 615 aaPredicted RBP24.58■■□□□ 1.53
PRPF40B-208ENST00000548436 TSPOAP1O95153 1857 aa24.57■■□□□ 1.52
PRPF40B-208ENST00000548436 EXOC6Q8TAG9 804 aa24.57■■□□□ 1.52
PRPF40B-208ENST00000548436 SLC12A5Q9H2X9 1139 aa24.54■■□□□ 1.52
PRPF40B-208ENST00000548436 SLC52A1Q9NWF4 448 aa24.54■■□□□ 1.52
PRPF40B-208ENST00000548436 ZNF521Q96K83 1311 aa24.54■■□□□ 1.52
PRPF40B-208ENST00000548436 TRHP20396 242 aaPredicted RBP24.54■■□□□ 1.52
PRPF40B-208ENST00000548436 TMEM131LA2VDJ0 1609 aa24.53■■□□□ 1.52
PRPF40B-208ENST00000548436 NSD3Q9BZ95 1437 aa24.53■■□□□ 1.52
PRPF40B-208ENST00000548436 ZFYVE9O95405 1425 aa24.51■■□□□ 1.51
PRPF40B-208ENST00000548436 FANCIQ9NVI1 1328 aa24.51■■□□□ 1.51
PRPF40B-208ENST00000548436 TULP4Q9NRJ4 1543 aa24.5■■□□□ 1.51
PRPF40B-208ENST00000548436 CCDC146Q8IYE0 955 aa24.5■■□□□ 1.51
PRPF40B-208ENST00000548436 PLIN1O60240 522 aa24.49■■□□□ 1.51
PRPF40B-208ENST00000548436 DUSP27Q5VZP5 1158 aa24.49■■□□□ 1.51
PRPF40B-208ENST00000548436 USP32Q8NFA0 1604 aa24.48■■□□□ 1.51
PRPF40B-208ENST00000548436 GOLGA2Q08379 1002 aa24.46■■□□□ 1.51
PRPF40B-208ENST00000548436 FBXO31Q5XUX0 539 aaPredicted RBP24.46■■□□□ 1.51
PRPF40B-208ENST00000548436 MSH5O43196 834 aa24.46■■□□□ 1.51
PRPF40B-208ENST00000548436 EVC2Q86UK5 1308 aa24.46■■□□□ 1.51
PRPF40B-208ENST00000548436 POLR3AO14802 1390 aaPredicted RBP24.45■■□□□ 1.51
PRPF40B-208ENST00000548436 ANP32EQ9BTT0 268 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms