RNA–Protein interactions for RNA: ENST00000547967.5

RNF41-203, Transcript of ring finger protein 41, humanhuman

TSL 1 (best)

Gene RNF41, Length 2,552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-203ENST00000547967 FBXO31Q5XUX0 539 aaPredicted RBP16.07■□□□□ 0.16
RNF41-203ENST00000547967 SIGLEC1Q9BZZ2 1709 aa16.06■□□□□ 0.16
RNF41-203ENST00000547967 ADGRB3O60242 1522 aa16.05■□□□□ 0.16
RNF41-203ENST00000547967 MYOM2P54296 1465 aa16.05■□□□□ 0.16
RNF41-203ENST00000547967 ZMYM4Q5VZL5 1548 aa16.05■□□□□ 0.16
RNF41-203ENST00000547967 NEURL4Q96JN8 1562 aa16.05■□□□□ 0.16
RNF41-203ENST00000547967 PER1O15534 1290 aaPredicted RBP16.05■□□□□ 0.16
RNF41-203ENST00000547967 TMEM132EQ6IEE7 984 aa16.05■□□□□ 0.16
RNF41-203ENST00000547967 TMC1Q8TDI8 760 aa16.05■□□□□ 0.16
RNF41-203ENST00000547967 CC2D1BQ5T0F9 858 aaKnown RBP16.04■□□□□ 0.16
RNF41-203ENST00000547967 SENP3-EIF4A1A0A087X0R7 540 aa16.03■□□□□ 0.16
RNF41-203ENST00000547967 IQGAP1P46940 1657 aa16.03■□□□□ 0.16
RNF41-203ENST00000547967 TRAK1Q9UPV9 953 aa16.03■□□□□ 0.16
RNF41-203ENST00000547967 KIF13AQ9H1H9 1805 aa16.03■□□□□ 0.16
RNF41-203ENST00000547967 EIF3AQ14152 1382 aaKnown RBP16.02■□□□□ 0.16
RNF41-203ENST00000547967 SYNMO15061 1565 aa16.02■□□□□ 0.16
RNF41-203ENST00000547967 ARHGAP31Q2M1Z3 1444 aa16.02■□□□□ 0.16
RNF41-203ENST00000547967 SUPT16HQ9Y5B9 1047 aaKnown RBP16.01■□□□□ 0.15
RNF41-203ENST00000547967 RALBP1Q15311 655 aa16.01■□□□□ 0.15
RNF41-203ENST00000547967 SLC52A1Q9NWF4 448 aa16.01■□□□□ 0.15
RNF41-203ENST00000547967 RPGRIP1LQ68CZ1 1315 aa16■□□□□ 0.15
RNF41-203ENST00000547967 IFT172Q9UG01 1749 aa16■□□□□ 0.15
RNF41-203ENST00000547967 C14orf93Q9H972 538 aaKnown RBP16■□□□□ 0.15
RNF41-203ENST00000547967 KTN1Q86UP2 1357 aaKnown RBP16■□□□□ 0.15
RNF41-203ENST00000547967 MYBBP1AQ9BQG0 1328 aaKnown RBP15.99■□□□□ 0.15
RNF41-203ENST00000547967 VGFO15240 615 aaPredicted RBP15.99■□□□□ 0.15
RNF41-203ENST00000547967 CDCA8Q53HL2 280 aa15.99■□□□□ 0.15
RNF41-203ENST00000547967 NRXN1Q9ULB1 1477 aa15.99■□□□□ 0.15
RNF41-203ENST00000547967 KIAA1210Q9ULL0 1709 aa15.98■□□□□ 0.15
RNF41-203ENST00000547967 ZC3H13Q5T200 1668 aaKnown RBP15.98■□□□□ 0.15
RNF41-203ENST00000547967 PIK3C2GO75747 1445 aa15.98■□□□□ 0.15
RNF41-203ENST00000547967 STAG3Q9UJ98 1225 aa15.98■□□□□ 0.15
RNF41-203ENST00000547967 PNISRQ8TF01 805 aaKnown RBP15.97■□□□□ 0.15
RNF41-203ENST00000547967 PPLO60437 1756 aa15.97■□□□□ 0.15
RNF41-203ENST00000547967 FKBP8Q14318 412 aa15.96■□□□□ 0.15
RNF41-203ENST00000547967 PIK3C2BO00750 1634 aa15.96■□□□□ 0.15
RNF41-203ENST00000547967 KNSTRNQ9Y448 316 aa15.96■□□□□ 0.15
RNF41-203ENST00000547967 ESF1Q9H501 851 aaKnown RBP15.95■□□□□ 0.14
RNF41-203ENST00000547967 CENPJQ9HC77 1338 aaPredicted RBP15.95■□□□□ 0.14
RNF41-203ENST00000547967 PARD3Q8TEW0 1356 aa15.95■□□□□ 0.14
RNF41-203ENST00000547967 PREX1Q8TCU6 1659 aa15.94■□□□□ 0.14
RNF41-203ENST00000547967 BCANQ96GW7 911 aa15.94■□□□□ 0.14
RNF41-203ENST00000547967 NLRP13Q86W25 1043 aa15.93■□□□□ 0.14
RNF41-203ENST00000547967 STK26Q9P289 416 aa15.93■□□□□ 0.14
RNF41-203ENST00000547967 PPP6R1Q9UPN7 881 aa15.93■□□□□ 0.14
RNF41-203ENST00000547967 BRD4O60885 1362 aaPredicted RBP15.93■□□□□ 0.14
RNF41-203ENST00000547967 SAFB2Q14151 953 aaKnown RBP eCLIP15.92■□□□□ 0.14
RNF41-203ENST00000547967 ZBED9Q6R2W3 1325 aa15.92■□□□□ 0.14
RNF41-203ENST00000547967 AGLP35573 1532 aa15.92■□□□□ 0.14
RNF41-203ENST00000547967 NEXMIFQ5QGS0 1516 aa15.92■□□□□ 0.14
RNF41-203ENST00000547967 ERVK-7P63135 1459 aa15.91■□□□□ 0.14
RNF41-203ENST00000547967 NEFLP07196 543 aa15.91■□□□□ 0.14
RNF41-203ENST00000547967 CLTCQ00610 1675 aaKnown RBP15.91■□□□□ 0.14
RNF41-203ENST00000547967 MYO5BQ9ULV0 1848 aa15.91■□□□□ 0.14
RNF41-203ENST00000547967 REREQ9P2R6 1566 aa15.91■□□□□ 0.14
RNF41-203ENST00000547967 TRHP20396 242 aaPredicted RBP15.9■□□□□ 0.14
RNF41-203ENST00000547967 SLC24A1O60721 1099 aa15.9■□□□□ 0.14
RNF41-203ENST00000547967 ADGRB1O14514 1584 aa15.9■□□□□ 0.14
RNF41-203ENST00000547967 AMER1Q5JTC6 1135 aaPredicted RBP15.89■□□□□ 0.13
RNF41-203ENST00000547967 SETBP1Q9Y6X0 1596 aa15.89■□□□□ 0.13
RNF41-203ENST00000547967 ARHGEF40Q8TER5 1519 aa15.89■□□□□ 0.13
RNF41-203ENST00000547967 TMEM131LA2VDJ0 1609 aa15.88■□□□□ 0.13
RNF41-203ENST00000547967 SALL2Q9Y467 1007 aaPredicted RBP15.87■□□□□ 0.13
RNF41-203ENST00000547967 ZMYM3Q14202 1370 aa15.87■□□□□ 0.13
RNF41-203ENST00000547967 IRX6P78412 446 aaPredicted RBP15.86■□□□□ 0.13
RNF41-203ENST00000547967 KDM5AP29375 1690 aaKnown RBP15.86■□□□□ 0.13
RNF41-203ENST00000547967 CARD14Q9BXL6 1004 aa15.85■□□□□ 0.13
RNF41-203ENST00000547967 SLC12A5Q9H2X9 1139 aa15.85■□□□□ 0.13
RNF41-203ENST00000547967 SBNO2Q9Y2G9 1366 aa15.84■□□□□ 0.13
RNF41-203ENST00000547967 PLPPR3Q6T4P5 718 aa15.84■□□□□ 0.13
RNF41-203ENST00000547967 LRPPRCP42704 1394 aaKnown RBP15.84■□□□□ 0.13
RNF41-203ENST00000547967 MYOM1P52179 1685 aa15.84■□□□□ 0.13
RNF41-203ENST00000547967 ZFYVE9O95405 1425 aa15.83■□□□□ 0.13
RNF41-203ENST00000547967 PPP2R1AP30153 589 aa15.83■□□□□ 0.12
RNF41-203ENST00000547967 MYO3AQ8NEV4 1616 aa15.82■□□□□ 0.12
RNF41-203ENST00000547967 CABP2Q9NPB3 220 aa15.82■□□□□ 0.12
RNF41-203ENST00000547967 QRICH2Q9H0J4 1663 aa15.81■□□□□ 0.12
RNF41-203ENST00000547967 ASXL1Q8IXJ9 1541 aa15.81■□□□□ 0.12
RNF41-203ENST00000547967 PRAM1Q96QH2 718 aa15.81■□□□□ 0.12
RNF41-203ENST00000547967 POGKQ9P215 609 aa15.81■□□□□ 0.12
RNF41-203ENST00000547967 EVC2Q86UK5 1308 aa15.8■□□□□ 0.12
RNF41-203ENST00000547967 A2ML1A8K2U0 1454 aa15.8■□□□□ 0.12
RNF41-203ENST00000547967 CEBPAP49715 358 aaPredicted RBP15.8■□□□□ 0.12
RNF41-203ENST00000547967 SPATA31D1Q6ZQQ2 1576 aa15.8■□□□□ 0.12
RNF41-203ENST00000547967 MINK1Q8N4C8 1332 aaPredicted RBP15.79■□□□□ 0.12
RNF41-203ENST00000547967 RIMS2Q9UQ26 1411 aa15.78■□□□□ 0.12
RNF41-203ENST00000547967 SRPK2P78362 688 aaKnown RBP15.78■□□□□ 0.12
RNF41-203ENST00000547967 TNNT2P45379 298 aaPredicted RBP15.78■□□□□ 0.12
RNF41-203ENST00000547967 YTHDC2Q9H6S0 1430 aaKnown RBP15.77■□□□□ 0.12
RNF41-203ENST00000547967 ADAMTS8Q9UP79 889 aa15.77■□□□□ 0.12
RNF41-203ENST00000547967 ARHGEF28Q8N1W1 1705 aaKnown RBP15.77■□□□□ 0.11
RNF41-203ENST00000547967 NSD3Q9BZ95 1437 aa15.75■□□□□ 0.11
RNF41-203ENST00000547967 ALKQ9UM73 1620 aa15.75■□□□□ 0.11
RNF41-203ENST00000547967 TNRQ92752 1358 aa15.75■□□□□ 0.11
RNF41-203ENST00000547967 WDR43Q15061 677 aaKnown RBP eCLIP15.75■□□□□ 0.11
RNF41-203ENST00000547967 WAPLQ7Z5K2 1190 aa15.75■□□□□ 0.11
RNF41-203ENST00000547967 NUDCQ9Y266 331 aa15.75■□□□□ 0.11
RNF41-203ENST00000547967 NPC1L1Q9UHC9 1359 aa15.74■□□□□ 0.11
RNF41-203ENST00000547967 TULP4Q9NRJ4 1543 aa15.74■□□□□ 0.11
RNF41-203ENST00000547967 PTPRMP28827 1452 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms