RNA–Protein interactions for RNA: ENST00000547701.5

CTDSP2-203, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 988 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-203ENST00000547701 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.75■■■■□ 3.15
CTDSP2-203ENST00000547701 RIMS2Q9UQ26 1411 aa34.74■■■■□ 3.15
CTDSP2-203ENST00000547701 CLTCL1P53675 1640 aa34.72■■■■□ 3.15
CTDSP2-203ENST00000547701 PLEKHG1Q9ULL1 1385 aa34.72■■■■□ 3.15
CTDSP2-203ENST00000547701 MPHOSPH9Q99550 1183 aa34.71■■■■□ 3.15
CTDSP2-203ENST00000547701 RAB3GAP2Q9H2M9 1393 aa34.69■■■■□ 3.14
CTDSP2-203ENST00000547701 KIF1BO60333 1816 aa34.68■■■■□ 3.14
CTDSP2-203ENST00000547701 STRCP1A6NGW2 1772 aa34.67■■■■□ 3.14
CTDSP2-203ENST00000547701 CHGAP10645 457 aaKnown RBP34.64■■■■□ 3.14
CTDSP2-203ENST00000547701 TBX22Q9Y458 520 aa34.59■■■■□ 3.13
CTDSP2-203ENST00000547701 DIP2AQ14689 1571 aa34.57■■■■□ 3.13
CTDSP2-203ENST00000547701 LRRC7Q96NW7 1537 aa34.56■■■■□ 3.12
CTDSP2-203ENST00000547701 PPP1R15AO75807 674 aaPredicted RBP34.56■■■■□ 3.12
CTDSP2-203ENST00000547701 KCNA6P17658 529 aa34.56■■■■□ 3.12
CTDSP2-203ENST00000547701 ADAMTS13Q76LX8 1427 aa34.55■■■■□ 3.12
CTDSP2-203ENST00000547701 RPGRIP1LQ68CZ1 1315 aa34.55■■■■□ 3.12
CTDSP2-203ENST00000547701 NWD1Q149M9 1564 aa34.54■■■■□ 3.12
CTDSP2-203ENST00000547701 NEXMIFQ5QGS0 1516 aa34.54■■■■□ 3.12
CTDSP2-203ENST00000547701 PIK3R4Q99570 1358 aa34.53■■■■□ 3.12
CTDSP2-203ENST00000547701 SLC26A8Q96RN1 970 aa34.53■■■■□ 3.12
CTDSP2-203ENST00000547701 CHD2O14647 1828 aaKnown RBP34.52■■■■□ 3.12
CTDSP2-203ENST00000547701 SETBP1Q9Y6X0 1596 aa34.52■■■■□ 3.12
CTDSP2-203ENST00000547701 CCDC144AA2RUR9 1427 aa34.51■■■■□ 3.12
CTDSP2-203ENST00000547701 FOXD1Q16676 465 aa34.5■■■■□ 3.11
CTDSP2-203ENST00000547701 NKTRP30414 1462 aaKnown RBP34.48■■■■□ 3.11
CTDSP2-203ENST00000547701 ZNF326Q5BKZ1 582 aaKnown RBP34.47■■■■□ 3.11
CTDSP2-203ENST00000547701 NRXN3Q9Y4C0 1643 aa34.46■■■■□ 3.11
CTDSP2-203ENST00000547701 SPATA31E1Q6ZUB1 1445 aa34.46■■■■□ 3.11
CTDSP2-203ENST00000547701 XIRP1Q702N8 1843 aaKnown RBP34.44■■■■□ 3.1
CTDSP2-203ENST00000547701 VGFO15240 615 aaPredicted RBP34.43■■■■□ 3.1
CTDSP2-203ENST00000547701 NUTM2DQ5VT03 806 aaPredicted RBP34.42■■■■□ 3.1
CTDSP2-203ENST00000547701 BCANQ96GW7 911 aa34.42■■■■□ 3.1
CTDSP2-203ENST00000547701 PPLO60437 1756 aa34.41■■■■□ 3.1
CTDSP2-203ENST00000547701 TOM1O60784 492 aa34.39■■■■□ 3.1
CTDSP2-203ENST00000547701 ANKRD30BQ9BXX2 1392 aa34.38■■■■□ 3.09
CTDSP2-203ENST00000547701 UBAP1LF5GYI3 381 aa34.38■■■■□ 3.09
CTDSP2-203ENST00000547701 NCOA3Q9Y6Q9 1424 aa34.37■■■■□ 3.09
CTDSP2-203ENST00000547701 ALKQ9UM73 1620 aa34.36■■■■□ 3.09
CTDSP2-203ENST00000547701 TMEM94Q12767 1356 aa34.33■■■■□ 3.09
CTDSP2-203ENST00000547701 IFT172Q9UG01 1749 aa34.33■■■■□ 3.09
CTDSP2-203ENST00000547701 PROSER2Q86WR7 435 aaPredicted RBP34.3■■■■□ 3.08
CTDSP2-203ENST00000547701 SETD1AO15047 1707 aaKnown RBP34.28■■■■□ 3.08
CTDSP2-203ENST00000547701 PTPRUQ92729 1446 aa34.28■■■■□ 3.08
CTDSP2-203ENST00000547701 XRN1Q8IZH2 1706 aaKnown RBP34.27■■■■□ 3.08
CTDSP2-203ENST00000547701 METP08581 1390 aa34.24■■■■□ 3.07
CTDSP2-203ENST00000547701 PRAG1Q86YV5 1406 aa34.24■■■■□ 3.07
CTDSP2-203ENST00000547701 AMOTL2Q9Y2J4 779 aa34.24■■■■□ 3.07
CTDSP2-203ENST00000547701 SENP3Q9H4L4 574 aaPredicted RBP34.21■■■■□ 3.07
CTDSP2-203ENST00000547701 RGL3Q3MIN7 710 aa34.2■■■■□ 3.07
CTDSP2-203ENST00000547701 NRXN1Q9ULB1 1477 aa34.18■■■■□ 3.06
CTDSP2-203ENST00000547701 MYOM2P54296 1465 aa34.17■■■■□ 3.06
CTDSP2-203ENST00000547701 STAC3Q96MF2 364 aa34.17■■■■□ 3.06
CTDSP2-203ENST00000547701 ADGRF5Q8IZF2 1346 aa34.16■■■■□ 3.06
CTDSP2-203ENST00000547701 PIK3C2GO75747 1445 aa34.15■■■■□ 3.06
CTDSP2-203ENST00000547701 MSH6P52701 1360 aa34.15■■■■□ 3.06
CTDSP2-203ENST00000547701 TRIM26Q12899 539 aaPredicted RBP34.14■■■■□ 3.06
CTDSP2-203ENST00000547701 FAM135BQ49AJ0 1406 aa34.13■■■■□ 3.05
CTDSP2-203ENST00000547701 PTCH1Q13635 1447 aa34.11■■■■□ 3.05
CTDSP2-203ENST00000547701 C19orf44Q9H6X5 657 aa34.1■■■■□ 3.05
CTDSP2-203ENST00000547701 DCCP43146 1447 aa34.08■■■■□ 3.05
CTDSP2-203ENST00000547701 PIP4K2BP78356 416 aa34.07■■■■□ 3.04
CTDSP2-203ENST00000547701 RBM33Q96EV2 1170 aaKnown RBP34.07■■■■□ 3.04
CTDSP2-203ENST00000547701 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.06■■■■□ 3.04
CTDSP2-203ENST00000547701 C14orf93Q9H972 538 aaKnown RBP34.04■■■■□ 3.04
CTDSP2-203ENST00000547701 LAMC1P11047 1609 aa34.04■■■■□ 3.04
CTDSP2-203ENST00000547701 TECPR2O15040 1411 aa34.04■■■■□ 3.04
CTDSP2-203ENST00000547701 CADPS2Q86UW7 1296 aa34.02■■■■□ 3.04
CTDSP2-203ENST00000547701 SLAIN2Q9P270 581 aa34■■■■□ 3.03
CTDSP2-203ENST00000547701 ABCC11Q96J66 1382 aa33.99■■■■□ 3.03
CTDSP2-203ENST00000547701 HSPA1LP34931 641 aa33.99■■■■□ 3.03
CTDSP2-203ENST00000547701 SCAF1Q9H7N4 1312 aaKnown RBP33.99■■■■□ 3.03
CTDSP2-203ENST00000547701 LRPPRCP42704 1394 aaKnown RBP33.98■■■■□ 3.03
CTDSP2-203ENST00000547701 ADGRL3Q9HAR2 1447 aa33.98■■■■□ 3.03
CTDSP2-203ENST00000547701 ASXL1Q8IXJ9 1541 aa33.98■■■■□ 3.03
CTDSP2-203ENST00000547701 DHX57Q6P158 1386 aaKnown RBP33.98■■■■□ 3.03
CTDSP2-203ENST00000547701 ROBO2Q9HCK4 1378 aa33.98■■■■□ 3.03
CTDSP2-203ENST00000547701 KNDC1Q76NI1 1749 aa33.97■■■■□ 3.03
CTDSP2-203ENST00000547701 SIRT1Q96EB6 747 aa33.96■■■■□ 3.03
CTDSP2-203ENST00000547701 ROBO1Q9Y6N7 1651 aa33.93■■■■□ 3.02
CTDSP2-203ENST00000547701 ATF3P18847 181 aa33.93■■■■□ 3.02
CTDSP2-203ENST00000547701 C14orf37Q86TY3 774 aa33.93■■■■□ 3.02
CTDSP2-203ENST00000547701 NALCNQ8IZF0 1738 aa33.91■■■■□ 3.02
CTDSP2-203ENST00000547701 YTHDC2Q9H6S0 1430 aaKnown RBP33.9■■■■□ 3.02
CTDSP2-203ENST00000547701 DCAF11Q8TEB1 546 aa33.9■■■■□ 3.02
CTDSP2-203ENST00000547701 CFAP70Q5T0N1 1121 aa33.88■■■■□ 3.01
CTDSP2-203ENST00000547701 TMEM132EQ6IEE7 984 aa33.85■■■■□ 3.01
CTDSP2-203ENST00000547701 MST1RQ04912 1400 aa33.85■■■■□ 3.01
CTDSP2-203ENST00000547701 ADGRB1O14514 1584 aa33.85■■■■□ 3.01
CTDSP2-203ENST00000547701 DLC1Q96QB1 1528 aa33.82■■■■□ 3
CTDSP2-203ENST00000547701 KIAA1210Q9ULL0 1709 aa33.79■■■■□ 3
CTDSP2-203ENST00000547701 KDM2AQ9Y2K7 1162 aa33.79■■■■□ 3
CTDSP2-203ENST00000547701 AHDC1Q5TGY3 1603 aaPredicted RBP33.78■■■■□ 3
CTDSP2-203ENST00000547701 CDC42BPGQ6DT37 1551 aa33.77■■■■□ 3
CTDSP2-203ENST00000547701 STK26Q9P289 416 aa33.75■■■□□ 2.99
CTDSP2-203ENST00000547701 BRINP3Q76B58 766 aa33.74■■■□□ 2.99
CTDSP2-203ENST00000547701 C1orf167Q5SNV9 1468 aa33.71■■■□□ 2.99
CTDSP2-203ENST00000547701 PHLPP1O60346 1717 aa33.71■■■□□ 2.99
CTDSP2-203ENST00000547701 WAPLQ7Z5K2 1190 aa33.71■■■□□ 2.99
CTDSP2-203ENST00000547701 COL16A1Q07092 1604 aaPredicted RBP33.69■■■□□ 2.98
CTDSP2-203ENST00000547701 PLEKHH1Q9ULM0 1364 aa33.69■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms