RNA–Protein interactions for RNA: ENST00000547691.6

CEP290-203, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best) BASIC

Gene CEP290, Length 5,968 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-203ENST00000547691 IQSEC2Q5JU85 1478 aa0.98□□□□□ -2.25
CEP290-203ENST00000547691 ABCC8Q09428 1581 aa0.98□□□□□ -2.25
CEP290-203ENST00000547691 ADAMTSL3P82987 1691 aa0.98□□□□□ -2.25
CEP290-203ENST00000547691 GDF9O60383 454 aa0.98□□□□□ -2.25
CEP290-203ENST00000547691 PROCP04070 461 aa0.98□□□□□ -2.25
CEP290-203ENST00000547691 TOP2BQ02880 1626 aa0.98□□□□□ -2.25
CEP290-203ENST00000547691 CADPSQ9ULU8 1353 aa0.98□□□□□ -2.25
CEP290-203ENST00000547691 GGCXP38435 758 aa0.98□□□□□ -2.25
CEP290-203ENST00000547691 GALNT6Q8NCL4 622 aa0.98□□□□□ -2.25
CEP290-203ENST00000547691 MAGI1Q96QZ7 1491 aaPredicted RBP0.97□□□□□ -2.25
CEP290-203ENST00000547691 KCTD17Q8N5Z5 321 aa0.97□□□□□ -2.25
CEP290-203ENST00000547691 SVEP1Q4LDE5 3571 aa0.97□□□□□ -2.25
CEP290-203ENST00000547691 SPATA31D1Q6ZQQ2 1576 aa0.97□□□□□ -2.25
CEP290-203ENST00000547691 NPAS3Q8IXF0 933 aa0.97□□□□□ -2.25
CEP290-203ENST00000547691 KIAA0586Q9BVV6 1533 aa0.97□□□□□ -2.25
CEP290-203ENST00000547691 FANCD2Q9BXW9 1451 aa0.97□□□□□ -2.25
CEP290-203ENST00000547691 ASPMQ8IZT6 3477 aa0.97□□□□□ -2.25
CEP290-203ENST00000547691 ABCC10Q5T3U5 1492 aa0.97□□□□□ -2.25
CEP290-203ENST00000547691 TRRAPQ9Y4A5 3859 aa0.97□□□□□ -2.25
CEP290-203ENST00000547691 TOP2AP11388 1531 aaKnown RBP0.97□□□□□ -2.25
CEP290-203ENST00000547691 PDZRN3Q9UPQ7 1066 aa0.97□□□□□ -2.25
CEP290-203ENST00000547691 VPS9D1Q9Y2B5 631 aa0.97□□□□□ -2.25
CEP290-203ENST00000547691 SNAPC4Q5SXM2 1469 aa0.96□□□□□ -2.25
CEP290-203ENST00000547691 IGHA1P01876 353 aa0.96□□□□□ -2.26
CEP290-203ENST00000547691 THSD4Q6ZMP0 1018 aa0.96□□□□□ -2.26
CEP290-203ENST00000547691 NBPF11Q86T75 865 aa0.96□□□□□ -2.26
CEP290-203ENST00000547691 ADCY10Q96PN6 1610 aa0.96□□□□□ -2.26
CEP290-203ENST00000547691 XIRP2A4UGR9 3374 aa0.96□□□□□ -2.26
CEP290-203ENST00000547691 ADAMTS12P58397 1594 aa0.96□□□□□ -2.26
CEP290-203ENST00000547691 TOPBP1Q92547 1522 aa0.96□□□□□ -2.26
CEP290-203ENST00000547691 BRIP1Q9BX63 1249 aa0.96□□□□□ -2.26
CEP290-203ENST00000547691 CEP170Q5SW79 1584 aa0.96□□□□□ -2.26
CEP290-203ENST00000547691 KCNC4Q03721 635 aa0.96□□□□□ -2.26
CEP290-203ENST00000547691 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP0.96□□□□□ -2.261e-6■■■■■ 29.7
CEP290-203ENST00000547691 RUSC2Q8N2Y8 1516 aa0.96□□□□□ -2.26
CEP290-203ENST00000547691 NUP160Q12769 1436 aa0.96□□□□□ -2.26
CEP290-203ENST00000547691 TJAP1Q5JTD0 557 aa0.96□□□□□ -2.26
CEP290-203ENST00000547691 ZBTB47Q9UFB7 747 aaPredicted RBP0.96□□□□□ -2.26
CEP290-203ENST00000547691 ZNF608Q9ULD9 1512 aaPredicted RBP0.96□□□□□ -2.26
CEP290-203ENST00000547691 GDF11O95390 407 aa0.96□□□□□ -2.26
CEP290-203ENST00000547691 PTTG1IPP53801 180 aa0.96□□□□□ -2.26
CEP290-203ENST00000547691 BCORL1Q5H9F3 1711 aa0.96□□□□□ -2.26
CEP290-203ENST00000547691 CFAP43Q8NDM7 1665 aa0.96□□□□□ -2.26
CEP290-203ENST00000547691 SCO2A0A1W2PP80 73 aa0.95□□□□□ -2.26
CEP290-203ENST00000547691 C11orf95C9JLR9 678 aaPredicted RBP0.95□□□□□ -2.26
CEP290-203ENST00000547691 TXKP42681 527 aa0.95□□□□□ -2.26
CEP290-203ENST00000547691 MARSP56192 900 aaKnown RBP0.95□□□□□ -2.26
CEP290-203ENST00000547691 ZSCAN1Q8NBB4 408 aa0.95□□□□□ -2.26
CEP290-203ENST00000547691 SYNJ2O15056 1496 aa0.95□□□□□ -2.26
CEP290-203ENST00000547691 DNAH12Q6ZR08 3092 aa0.95□□□□□ -2.26
CEP290-203ENST00000547691 VCANP13611 3396 aa0.95□□□□□ -2.26
CEP290-203ENST00000547691 FER1L4A9Z1Z3 1794 aa0.95□□□□□ -2.26
CEP290-203ENST00000547691 MROH2BQ7Z745 1585 aa0.95□□□□□ -2.26
CEP290-203ENST00000547691 ADGRL1O94910 1474 aa0.95□□□□□ -2.26
CEP290-203ENST00000547691 GPAT2Q6NUI2 795 aa0.95□□□□□ -2.26
CEP290-203ENST00000547691 TRIM41Q8WV44 630 aa0.95□□□□□ -2.26
CEP290-203ENST00000547691 BIVM-ERCC5R4GMW8 1640 aa0.95□□□□□ -2.26
CEP290-203ENST00000547691 LAMA2P24043 3122 aaKnown RBP0.95□□□□□ -2.26
CEP290-203ENST00000547691 UHRF1BP1LA0JNW5 1464 aa0.95□□□□□ -2.26
CEP290-203ENST00000547691 PSDA5PKW4 1024 aaPredicted RBP0.95□□□□□ -2.26
CEP290-203ENST00000547691 YBX3P16989 372 aaKnown RBP eCLIP0.95□□□□□ -2.26
CEP290-203ENST00000547691 WNT2BQ93097 391 aa0.95□□□□□ -2.26
CEP290-203ENST00000547691 PREX1Q8TCU6 1659 aa0.95□□□□□ -2.26
CEP290-203ENST00000547691 TTC37Q6PGP7 1564 aa0.95□□□□□ -2.26
CEP290-203ENST00000547691 WIZO95785 1651 aa0.95□□□□□ -2.26
CEP290-203ENST00000547691 HOXB4P17483 251 aaPredicted RBP0.95□□□□□ -2.26
CEP290-203ENST00000547691 WDR26Q9H7D7 661 aa0.95□□□□□ -2.26
CEP290-203ENST00000547691 TRANK1O15050 2925 aa0.95□□□□□ -2.26
CEP290-203ENST00000547691 GAPVD1Q14C86 1478 aa0.94□□□□□ -2.26
CEP290-203ENST00000547691 STRCQ7RTU9 1775 aa0.94□□□□□ -2.26
CEP290-203ENST00000547691 PCF11O94913 1555 aaKnown RBP0.94□□□□□ -2.26
CEP290-203ENST00000547691 FBXO41Q8TF61 875 aa0.94□□□□□ -2.26
CEP290-203ENST00000547691 ZBED2Q9BTP6 218 aa0.94□□□□□ -2.26
CEP290-203ENST00000547691 MUC2Q02817 5179 aa0.94□□□□□ -2.26
CEP290-203ENST00000547691 ZNF142P52746 1687 aaPredicted RBP0.94□□□□□ -2.26
CEP290-203ENST00000547691 TNXBP22105 4242 aa0.94□□□□□ -2.26
CEP290-203ENST00000547691 FRMPD1Q5SYB0 1578 aa0.94□□□□□ -2.26
CEP290-203ENST00000547691 FMNL2Q96PY5 1086 aa0.94□□□□□ -2.26
CEP290-203ENST00000547691 KDM5BQ9UGL1 1544 aa0.94□□□□□ -2.26
CEP290-203ENST00000547691 FAM187AA6NFU0 413 aa0.94□□□□□ -2.26
CEP290-203ENST00000547691 DGAT1O75907 488 aa0.94□□□□□ -2.26
CEP290-203ENST00000547691 PRKD2Q9BZL6 878 aa0.94□□□□□ -2.26
CEP290-203ENST00000547691 LMTK3Q96Q04 1460 aa0.94□□□□□ -2.26
CEP290-203ENST00000547691 PAX4O43316 350 aa0.94□□□□□ -2.26
CEP290-203ENST00000547691 MIER1Q8N108 512 aa0.94□□□□□ -2.26
CEP290-203ENST00000547691 FAM212AQ96EL1 285 aa0.94□□□□□ -2.26
CEP290-203ENST00000547691 EPRSP07814 1512 aaKnown RBP0.94□□□□□ -2.26
CEP290-203ENST00000547691 ERICH3Q5RHP9 1530 aa0.94□□□□□ -2.26
CEP290-203ENST00000547691 REREQ9P2R6 1566 aa0.94□□□□□ -2.26
CEP290-203ENST00000547691 LTBP4Q8N2S1 1624 aa0.94□□□□□ -2.26
CEP290-203ENST00000547691 POLA1P09884 1462 aaPredicted RBP0.94□□□□□ -2.26
CEP290-203ENST00000547691 ABCA10Q8WWZ4 1543 aa0.93□□□□□ -2.26
CEP290-203ENST00000547691 SOCS7O14512 581 aa0.93□□□□□ -2.26
CEP290-203ENST00000547691 MRPL50Q8N5N7 158 aaKnown RBP0.93□□□□□ -2.26
CEP290-203ENST00000547691 COL6A3P12111 3177 aa0.93□□□□□ -2.26
CEP290-203ENST00000547691 ZMYM4Q5VZL5 1548 aa0.93□□□□□ -2.26
CEP290-203ENST00000547691 FOXK2Q01167 660 aa0.93□□□□□ -2.26
CEP290-203ENST00000547691 PLCD3Q8N3E9 789 aa0.93□□□□□ -2.26
CEP290-203ENST00000547691 SIGLEC1Q9BZZ2 1709 aa0.93□□□□□ -2.26
CEP290-203ENST00000547691 GRIN2BQ13224 1484 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms