RNA–Protein interactions for RNA: ENST00000546918.1

TUBA1A-203, Transcript of tubulin alpha 1a, humanhuman

TSL 3 BASIC

Gene TUBA1A, Length 984 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-203ENST00000546918 MYOM2P54296 1465 aa25.05■■□□□ 1.6
TUBA1A-203ENST00000546918 TMEM2Q9UHN6 1383 aa25.05■■□□□ 1.6
TUBA1A-203ENST00000546918 RIMS2Q9UQ26 1411 aa25.04■■□□□ 1.6
TUBA1A-203ENST00000546918 THEMISQ8N1K5 641 aaPredicted RBP25.04■■□□□ 1.6
TUBA1A-203ENST00000546918 L3MBTL2Q969R5 705 aa25.04■■□□□ 1.6
TUBA1A-203ENST00000546918 POLR1AO95602 1720 aaPredicted RBP25■■□□□ 1.59
TUBA1A-203ENST00000546918 DCAF11Q8TEB1 546 aa24.99■■□□□ 1.59
TUBA1A-203ENST00000546918 NRXN1Q9ULB1 1477 aa24.98■■□□□ 1.59
TUBA1A-203ENST00000546918 SCAF11Q99590 1463 aaKnown RBP24.97■■□□□ 1.59
TUBA1A-203ENST00000546918 STAC3Q96MF2 364 aa24.97■■□□□ 1.59
TUBA1A-203ENST00000546918 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.96■■□□□ 1.59
TUBA1A-203ENST00000546918 ZEB1P37275 1124 aaPredicted RBP24.95■■□□□ 1.58
TUBA1A-203ENST00000546918 PRAG1Q86YV5 1406 aa24.95■■□□□ 1.58
TUBA1A-203ENST00000546918 HDGFP51858 240 aaKnown RBP24.94■■□□□ 1.58
TUBA1A-203ENST00000546918 KDM2AQ9Y2K7 1162 aa24.94■■□□□ 1.58
TUBA1A-203ENST00000546918 VGFO15240 615 aaPredicted RBP24.93■■□□□ 1.58
TUBA1A-203ENST00000546918 PIK3C2GO75747 1445 aa24.93■■□□□ 1.58
TUBA1A-203ENST00000546918 IQGAP1P46940 1657 aa24.92■■□□□ 1.58
TUBA1A-203ENST00000546918 NUTM2DQ5VT03 806 aaPredicted RBP24.92■■□□□ 1.58
TUBA1A-203ENST00000546918 EID1Q9Y6B2 187 aa24.92■■□□□ 1.58
TUBA1A-203ENST00000546918 LAMC1P11047 1609 aa24.92■■□□□ 1.58
TUBA1A-203ENST00000546918 ADGRF5Q8IZF2 1346 aa24.91■■□□□ 1.58
TUBA1A-203ENST00000546918 PPP1R15AO75807 674 aaPredicted RBP24.91■■□□□ 1.58
TUBA1A-203ENST00000546918 SETBP1Q9Y6X0 1596 aa24.91■■□□□ 1.58
TUBA1A-203ENST00000546918 NRXN3Q9Y4C0 1643 aa24.9■■□□□ 1.58
TUBA1A-203ENST00000546918 KIAA1210Q9ULL0 1709 aa24.9■■□□□ 1.58
TUBA1A-203ENST00000546918 PLEKHG1Q9ULL1 1385 aa24.9■■□□□ 1.58
TUBA1A-203ENST00000546918 TRPM1Q7Z4N2 1603 aa24.9■■□□□ 1.58
TUBA1A-203ENST00000546918 LTKP29376 864 aa24.89■■□□□ 1.58
TUBA1A-203ENST00000546918 TXNDC2Q86VQ3 553 aa24.89■■□□□ 1.58
TUBA1A-203ENST00000546918 HSPA2P54652 639 aa24.88■■□□□ 1.57
TUBA1A-203ENST00000546918 ANKLE2Q86XL3 938 aa24.88■■□□□ 1.57
TUBA1A-203ENST00000546918 MED14O60244 1454 aa24.86■■□□□ 1.57
TUBA1A-203ENST00000546918 SETD1AO15047 1707 aaKnown RBP24.86■■□□□ 1.57
TUBA1A-203ENST00000546918 STRCQ7RTU9 1775 aa24.85■■□□□ 1.57
TUBA1A-203ENST00000546918 DIP2AQ14689 1571 aa24.84■■□□□ 1.57
TUBA1A-203ENST00000546918 RALGAPBQ86X10 1494 aa24.84■■□□□ 1.57
TUBA1A-203ENST00000546918 NBPF8Q3BBV2 869 aa24.84■■□□□ 1.57
TUBA1A-203ENST00000546918 AEBP2Q6ZN18 517 aaPredicted RBP24.84■■□□□ 1.57
TUBA1A-203ENST00000546918 ALKQ9UM73 1620 aa24.83■■□□□ 1.57
TUBA1A-203ENST00000546918 NPHP4O75161 1426 aaPredicted RBP24.83■■□□□ 1.57
TUBA1A-203ENST00000546918 ADAMTS13Q76LX8 1427 aa24.8■■□□□ 1.56
TUBA1A-203ENST00000546918 NCKAP5LQ9HCH0 1330 aa24.8■■□□□ 1.56
TUBA1A-203ENST00000546918 ASXL1Q8IXJ9 1541 aa24.78■■□□□ 1.56
TUBA1A-203ENST00000546918 SENP3Q9H4L4 574 aaPredicted RBP24.77■■□□□ 1.56
TUBA1A-203ENST00000546918 ADGRB1O14514 1584 aa24.76■■□□□ 1.55
TUBA1A-203ENST00000546918 BCANQ96GW7 911 aa24.76■■□□□ 1.55
TUBA1A-203ENST00000546918 C14orf93Q9H972 538 aaKnown RBP24.76■■□□□ 1.55
TUBA1A-203ENST00000546918 CFAP70Q5T0N1 1121 aa24.75■■□□□ 1.55
TUBA1A-203ENST00000546918 ROCK2O75116 1388 aaKnown RBP24.74■■□□□ 1.55
TUBA1A-203ENST00000546918 GPRASP1Q5JY77 1395 aa24.73■■□□□ 1.55
TUBA1A-203ENST00000546918 NBPF1Q3BBV0 1214 aa24.69■■□□□ 1.54
TUBA1A-203ENST00000546918 SLC26A8Q96RN1 970 aa24.69■■□□□ 1.54
TUBA1A-203ENST00000546918 TBX22Q9Y458 520 aa24.69■■□□□ 1.54
TUBA1A-203ENST00000546918 KNDC1Q76NI1 1749 aa24.69■■□□□ 1.54
TUBA1A-203ENST00000546918 METP08581 1390 aa24.67■■□□□ 1.54
TUBA1A-203ENST00000546918 XRN1Q8IZH2 1706 aaKnown RBP24.66■■□□□ 1.54
TUBA1A-203ENST00000546918 PIK3R4Q99570 1358 aa24.66■■□□□ 1.54
TUBA1A-203ENST00000546918 CHD2O14647 1828 aaKnown RBP24.65■■□□□ 1.54
TUBA1A-203ENST00000546918 YTHDC2Q9H6S0 1430 aaKnown RBP24.65■■□□□ 1.54
TUBA1A-203ENST00000546918 ARHGEF28Q8N1W1 1705 aaKnown RBP24.64■■□□□ 1.54
TUBA1A-203ENST00000546918 NWD1Q149M9 1564 aa24.64■■□□□ 1.54
TUBA1A-203ENST00000546918 TMEM132EQ6IEE7 984 aa24.64■■□□□ 1.54
TUBA1A-203ENST00000546918 CARD11Q9BXL7 1154 aa24.64■■□□□ 1.54
TUBA1A-203ENST00000546918 CPS1P31327 1500 aa24.63■■□□□ 1.53
TUBA1A-203ENST00000546918 LRPPRCP42704 1394 aaKnown RBP24.63■■□□□ 1.53
TUBA1A-203ENST00000546918 PTPRUQ92729 1446 aa24.61■■□□□ 1.53
TUBA1A-203ENST00000546918 DMRT2Q9Y5R5 561 aa24.61■■□□□ 1.53
TUBA1A-203ENST00000546918 DLC1Q96QB1 1528 aa24.61■■□□□ 1.53
TUBA1A-203ENST00000546918 TECPR2O15040 1411 aa24.6■■□□□ 1.53
TUBA1A-203ENST00000546918 ABCC11Q96J66 1382 aa24.57■■□□□ 1.52
TUBA1A-203ENST00000546918 USP47Q96K76 1375 aa24.57■■□□□ 1.52
TUBA1A-203ENST00000546918 EIF3AQ14152 1382 aaKnown RBP24.56■■□□□ 1.52
TUBA1A-203ENST00000546918 PTCH1Q13635 1447 aa24.56■■□□□ 1.52
TUBA1A-203ENST00000546918 STRCP1A6NGW2 1772 aa24.56■■□□□ 1.52
TUBA1A-203ENST00000546918 NKTRP30414 1462 aaKnown RBP24.54■■□□□ 1.52
TUBA1A-203ENST00000546918 STK26Q9P289 416 aa24.54■■□□□ 1.52
TUBA1A-203ENST00000546918 QRICH2Q9H0J4 1663 aa24.53■■□□□ 1.52
TUBA1A-203ENST00000546918 TRAK1Q9UPV9 953 aa24.53■■□□□ 1.52
TUBA1A-203ENST00000546918 AMOTL2Q9Y2J4 779 aa24.53■■□□□ 1.52
TUBA1A-203ENST00000546918 FAM135BQ49AJ0 1406 aa24.52■■□□□ 1.52
TUBA1A-203ENST00000546918 KCNA6P17658 529 aa24.51■■□□□ 1.51
TUBA1A-203ENST00000546918 EIF4G2P78344 907 aaKnown RBP eCLIP24.5■■□□□ 1.51
TUBA1A-203ENST00000546918 ROBO2Q9HCK4 1378 aa24.5■■□□□ 1.51
TUBA1A-203ENST00000546918 CENPJQ9HC77 1338 aaPredicted RBP24.46■■□□□ 1.51
TUBA1A-203ENST00000546918 HSPA5P11021 654 aaKnown RBP24.46■■□□□ 1.51
TUBA1A-203ENST00000546918 SIRT1Q96EB6 747 aa24.46■■□□□ 1.51
TUBA1A-203ENST00000546918 ZNF335Q9H4Z2 1342 aaPredicted RBP24.45■■□□□ 1.5
TUBA1A-203ENST00000546918 PRAM1Q96QH2 718 aa24.45■■□□□ 1.5
TUBA1A-203ENST00000546918 PLEKHH1Q9ULM0 1364 aa24.44■■□□□ 1.5
TUBA1A-203ENST00000546918 ST20-MTHFSA0A0A6YYL1 179 aa24.43■■□□□ 1.5
TUBA1A-203ENST00000546918 SBNO2Q9Y2G9 1366 aa24.42■■□□□ 1.5
TUBA1A-203ENST00000546918 ADGRB2O60241 1585 aa24.42■■□□□ 1.5
TUBA1A-203ENST00000546918 NALCNQ8IZF0 1738 aa24.42■■□□□ 1.5
TUBA1A-203ENST00000546918 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.42■■□□□ 1.5
TUBA1A-203ENST00000546918 POGKQ9P215 609 aa24.42■■□□□ 1.5
TUBA1A-203ENST00000546918 WAPLQ7Z5K2 1190 aa24.4■■□□□ 1.5
TUBA1A-203ENST00000546918 LTBP4Q8N2S1 1624 aa24.39■■□□□ 1.5
TUBA1A-203ENST00000546918 XIRP1Q702N8 1843 aaKnown RBP24.39■■□□□ 1.49
TUBA1A-203ENST00000546918 SAFB2Q14151 953 aaKnown RBP eCLIP24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms