RNA–Protein interactions for RNA: ENST00000546443.5

CALCOCO1-203, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-203ENST00000546443 ARHGEF40Q8TER5 1519 aa21.08■□□□□ 0.97
CALCOCO1-203ENST00000546443 SCAF11Q99590 1463 aaKnown RBP21.07■□□□□ 0.96
CALCOCO1-203ENST00000546443 ADGRF5Q8IZF2 1346 aa21.05■□□□□ 0.96
CALCOCO1-203ENST00000546443 POLR3GLQ9BT43 218 aa21.04■□□□□ 0.96
CALCOCO1-203ENST00000546443 GTF3C3Q9Y5Q9 886 aa21.04■□□□□ 0.96
CALCOCO1-203ENST00000546443 DISP3Q9P2K9 1392 aa21.03■□□□□ 0.96
CALCOCO1-203ENST00000546443 RPGRIP1LQ68CZ1 1315 aa21.02■□□□□ 0.96
CALCOCO1-203ENST00000546443 SETBP1Q9Y6X0 1596 aa21.02■□□□□ 0.96
CALCOCO1-203ENST00000546443 PPP6R1Q9UPN7 881 aa21.01■□□□□ 0.95
CALCOCO1-203ENST00000546443 NEXMIFQ5QGS0 1516 aa21■□□□□ 0.95
CALCOCO1-203ENST00000546443 CLTCQ00610 1675 aaKnown RBP21■□□□□ 0.95
CALCOCO1-203ENST00000546443 CCDC184Q52MB2 194 aa20.99■□□□□ 0.95
CALCOCO1-203ENST00000546443 PIK3C2GO75747 1445 aa20.98■□□□□ 0.95
CALCOCO1-203ENST00000546443 MYO3AQ8NEV4 1616 aa20.98■□□□□ 0.95
CALCOCO1-203ENST00000546443 CHGAP10645 457 aaKnown RBP20.98■□□□□ 0.95
CALCOCO1-203ENST00000546443 TMF1P82094 1093 aa20.98■□□□□ 0.95
CALCOCO1-203ENST00000546443 CFAP70Q5T0N1 1121 aa20.98■□□□□ 0.95
CALCOCO1-203ENST00000546443 MYO5BQ9ULV0 1848 aa20.98■□□□□ 0.95
CALCOCO1-203ENST00000546443 TMEM131LA2VDJ0 1609 aa20.97■□□□□ 0.95
CALCOCO1-203ENST00000546443 ERVK-7P63135 1459 aa20.97■□□□□ 0.95
CALCOCO1-203ENST00000546443 SLC52A1Q9NWF4 448 aa20.95■□□□□ 0.94
CALCOCO1-203ENST00000546443 EIF3AQ14152 1382 aaKnown RBP20.95■□□□□ 0.94
CALCOCO1-203ENST00000546443 IDI1Q13907 227 aa20.94■□□□□ 0.94
CALCOCO1-203ENST00000546443 ADGRB1O14514 1584 aa20.93■□□□□ 0.94
CALCOCO1-203ENST00000546443 SPATA31D1Q6ZQQ2 1576 aa20.92■□□□□ 0.94
CALCOCO1-203ENST00000546443 C14orf93Q9H972 538 aaKnown RBP20.92■□□□□ 0.94
CALCOCO1-203ENST00000546443 KTN1Q86UP2 1357 aaKnown RBP20.92■□□□□ 0.94
CALCOCO1-203ENST00000546443 ZFYVE9O95405 1425 aa20.92■□□□□ 0.94
CALCOCO1-203ENST00000546443 PER1O15534 1290 aaPredicted RBP20.89■□□□□ 0.94
CALCOCO1-203ENST00000546443 MYOM1P52179 1685 aa20.89■□□□□ 0.94
CALCOCO1-203ENST00000546443 MRS2Q9HD23 443 aa20.89■□□□□ 0.94
CALCOCO1-203ENST00000546443 KDM5AP29375 1690 aaKnown RBP20.88■□□□□ 0.93
CALCOCO1-203ENST00000546443 FBXO31Q5XUX0 539 aaPredicted RBP20.88■□□□□ 0.93
CALCOCO1-203ENST00000546443 SBNO2Q9Y2G9 1366 aa20.86■□□□□ 0.93
CALCOCO1-203ENST00000546443 VGFO15240 615 aaPredicted RBP20.86■□□□□ 0.93
CALCOCO1-203ENST00000546443 CDCA8Q53HL2 280 aa20.85■□□□□ 0.93
CALCOCO1-203ENST00000546443 RALBP1Q15311 655 aa20.84■□□□□ 0.93
CALCOCO1-203ENST00000546443 PARD3Q8TEW0 1356 aa20.84■□□□□ 0.93
CALCOCO1-203ENST00000546443 QRICH2Q9H0J4 1663 aa20.84■□□□□ 0.93
CALCOCO1-203ENST00000546443 SLC24A1O60721 1099 aa20.83■□□□□ 0.93
CALCOCO1-203ENST00000546443 PANK3Q9H999 370 aa20.83■□□□□ 0.92
CALCOCO1-203ENST00000546443 ARHGEF28Q8N1W1 1705 aaKnown RBP20.82■□□□□ 0.92
CALCOCO1-203ENST00000546443 MYBBP1AQ9BQG0 1328 aaKnown RBP20.81■□□□□ 0.92
CALCOCO1-203ENST00000546443 MLECQ14165 292 aa20.81■□□□□ 0.92
CALCOCO1-203ENST00000546443 HNRNPUQ00839 825 aaKnown RBP eCLIP20.8■□□□□ 0.92
CALCOCO1-203ENST00000546443 ASXL1Q8IXJ9 1541 aa20.8■□□□□ 0.92
CALCOCO1-203ENST00000546443 A2ML1A8K2U0 1454 aa20.78■□□□□ 0.92
CALCOCO1-203ENST00000546443 BRD4O60885 1362 aaPredicted RBP20.78■□□□□ 0.92
CALCOCO1-203ENST00000546443 CENPJQ9HC77 1338 aaPredicted RBP20.78■□□□□ 0.92
CALCOCO1-203ENST00000546443 CNGB1Q14028 1251 aaPredicted RBP20.78■□□□□ 0.92
CALCOCO1-203ENST00000546443 FAM9BQ8IZU0 186 aa20.78■□□□□ 0.92
CALCOCO1-203ENST00000546443 ZMYM3Q14202 1370 aa20.77■□□□□ 0.92
CALCOCO1-203ENST00000546443 NUTM2DQ5VT03 806 aaPredicted RBP20.77■□□□□ 0.92
CALCOCO1-203ENST00000546443 TMEM132EQ6IEE7 984 aa20.76■□□□□ 0.91
CALCOCO1-203ENST00000546443 TRAK1Q9UPV9 953 aa20.75■□□□□ 0.91
CALCOCO1-203ENST00000546443 PNISRQ8TF01 805 aaKnown RBP20.73■□□□□ 0.91
CALCOCO1-203ENST00000546443 ALKQ9UM73 1620 aa20.73■□□□□ 0.91
CALCOCO1-203ENST00000546443 TMC1Q8TDI8 760 aa20.72■□□□□ 0.91
CALCOCO1-203ENST00000546443 LRPPRCP42704 1394 aaKnown RBP20.72■□□□□ 0.91
CALCOCO1-203ENST00000546443 SETD1AO15047 1707 aaKnown RBP20.71■□□□□ 0.91
CALCOCO1-203ENST00000546443 NLRP13Q86W25 1043 aa20.7■□□□□ 0.9
CALCOCO1-203ENST00000546443 ESF1Q9H501 851 aaKnown RBP20.7■□□□□ 0.9
CALCOCO1-203ENST00000546443 NPC1L1Q9UHC9 1359 aa20.7■□□□□ 0.9
CALCOCO1-203ENST00000546443 RIMS2Q9UQ26 1411 aa20.7■□□□□ 0.9
CALCOCO1-203ENST00000546443 ZBED9Q6R2W3 1325 aa20.69■□□□□ 0.9
CALCOCO1-203ENST00000546443 STAG3Q9UJ98 1225 aa20.68■□□□□ 0.9
CALCOCO1-203ENST00000546443 TULP4Q9NRJ4 1543 aa20.68■□□□□ 0.9
CALCOCO1-203ENST00000546443 AMER1Q5JTC6 1135 aaPredicted RBP20.68■□□□□ 0.9
CALCOCO1-203ENST00000546443 CC2D1BQ5T0F9 858 aaKnown RBP20.68■□□□□ 0.9
CALCOCO1-203ENST00000546443 PTPRMP28827 1452 aa20.67■□□□□ 0.9
CALCOCO1-203ENST00000546443 TNRQ92752 1358 aa20.66■□□□□ 0.9
CALCOCO1-203ENST00000546443 PUS7Q96PZ0 661 aaKnown RBP20.66■□□□□ 0.9
CALCOCO1-203ENST00000546443 KNSTRNQ9Y448 316 aa20.66■□□□□ 0.9
CALCOCO1-203ENST00000546443 UBR1Q8IWV7 1749 aa20.66■□□□□ 0.9
CALCOCO1-203ENST00000546443 YTHDC2Q9H6S0 1430 aaKnown RBP20.65■□□□□ 0.9
CALCOCO1-203ENST00000546443 NRXN3Q9Y4C0 1643 aa20.65■□□□□ 0.9
CALCOCO1-203ENST00000546443 C3P01024 1663 aa20.63■□□□□ 0.89
CALCOCO1-203ENST00000546443 TRHP20396 242 aaPredicted RBP20.62■□□□□ 0.89
CALCOCO1-203ENST00000546443 FER1L4A9Z1Z3 1794 aa20.62■□□□□ 0.89
CALCOCO1-203ENST00000546443 DLC1Q96QB1 1528 aa20.61■□□□□ 0.89
CALCOCO1-203ENST00000546443 SUPT16HQ9Y5B9 1047 aaKnown RBP20.61■□□□□ 0.89
CALCOCO1-203ENST00000546443 USP32Q8NFA0 1604 aa20.6■□□□□ 0.89
CALCOCO1-203ENST00000546443 CARD14Q9BXL6 1004 aa20.6■□□□□ 0.89
CALCOCO1-203ENST00000546443 INSRP06213 1382 aa20.6■□□□□ 0.89
CALCOCO1-203ENST00000546443 EVC2Q86UK5 1308 aa20.6■□□□□ 0.89
CALCOCO1-203ENST00000546443 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.59■□□□□ 0.89
CALCOCO1-203ENST00000546443 STK26Q9P289 416 aa20.58■□□□□ 0.88
CALCOCO1-203ENST00000546443 NLRP1Q9C000 1473 aa20.58■□□□□ 0.88
CALCOCO1-203ENST00000546443 PPP2R1AP30153 589 aa20.57■□□□□ 0.88
CALCOCO1-203ENST00000546443 KNDC1Q76NI1 1749 aa20.56■□□□□ 0.88
CALCOCO1-203ENST00000546443 SENP3Q9H4L4 574 aaPredicted RBP20.55■□□□□ 0.88
CALCOCO1-203ENST00000546443 TMEM2Q9UHN6 1383 aa20.54■□□□□ 0.88
CALCOCO1-203ENST00000546443 SLC12A5Q9H2X9 1139 aa20.53■□□□□ 0.88
CALCOCO1-203ENST00000546443 BLMP54132 1417 aaPredicted RBP20.53■□□□□ 0.88
CALCOCO1-203ENST00000546443 PRAM1Q96QH2 718 aa20.53■□□□□ 0.88
CALCOCO1-203ENST00000546443 NSD3Q9BZ95 1437 aa20.52■□□□□ 0.88
CALCOCO1-203ENST00000546443 HDGFP51858 240 aaKnown RBP20.52■□□□□ 0.87
CALCOCO1-203ENST00000546443 ABCC11Q96J66 1382 aa20.51■□□□□ 0.87
CALCOCO1-203ENST00000546443 ANKRD36BQ8N2N9 1353 aa20.51■□□□□ 0.87
CALCOCO1-203ENST00000546443 NINLQ9Y2I6 1382 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms