RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 ZNF326Q5BKZ1 582 aaKnown RBP30.42■■■□□ 2.46
SCARB1-211ENST00000546215 SPATA31E1Q6ZUB1 1445 aa30.42■■■□□ 2.46
SCARB1-211ENST00000546215 DMRT2Q9Y5R5 561 aa30.41■■■□□ 2.46
SCARB1-211ENST00000546215 MED14O60244 1454 aa30.41■■■□□ 2.46
SCARB1-211ENST00000546215 HDGFP51858 240 aaKnown RBP30.39■■■□□ 2.46
SCARB1-211ENST00000546215 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.37■■■□□ 2.45
SCARB1-211ENST00000546215 NPHP4O75161 1426 aaPredicted RBP30.36■■■□□ 2.45
SCARB1-211ENST00000546215 RGL3Q3MIN7 710 aa30.35■■■□□ 2.45
SCARB1-211ENST00000546215 NUTM2DQ5VT03 806 aaPredicted RBP30.35■■■□□ 2.45
SCARB1-211ENST00000546215 NEXMIFQ5QGS0 1516 aa30.35■■■□□ 2.45
SCARB1-211ENST00000546215 RPGRIP1LQ68CZ1 1315 aa30.34■■■□□ 2.45
SCARB1-211ENST00000546215 PPP1R15AO75807 674 aaPredicted RBP30.32■■■□□ 2.44
SCARB1-211ENST00000546215 IQGAP1P46940 1657 aa30.31■■■□□ 2.44
SCARB1-211ENST00000546215 PLEKHG1Q9ULL1 1385 aa30.29■■■□□ 2.44
SCARB1-211ENST00000546215 SIN3AQ96ST3 1273 aa30.28■■■□□ 2.44
SCARB1-211ENST00000546215 PPLO60437 1756 aa30.27■■■□□ 2.44
SCARB1-211ENST00000546215 VGFO15240 615 aaPredicted RBP30.25■■■□□ 2.43
SCARB1-211ENST00000546215 SENP3Q9H4L4 574 aaPredicted RBP30.24■■■□□ 2.43
SCARB1-211ENST00000546215 IFT172Q9UG01 1749 aa30.23■■■□□ 2.43
SCARB1-211ENST00000546215 BCANQ96GW7 911 aa30.21■■■□□ 2.43
SCARB1-211ENST00000546215 SLC26A8Q96RN1 970 aa30.2■■■□□ 2.43
SCARB1-211ENST00000546215 NEUROD1Q13562 356 aa30.19■■■□□ 2.42
SCARB1-211ENST00000546215 ADAMTS13Q76LX8 1427 aa30.18■■■□□ 2.42
SCARB1-211ENST00000546215 ADGRF5Q8IZF2 1346 aa30.18■■■□□ 2.42
SCARB1-211ENST00000546215 SETBP1Q9Y6X0 1596 aa30.17■■■□□ 2.42
SCARB1-211ENST00000546215 NRXN3Q9Y4C0 1643 aa30.16■■■□□ 2.42
SCARB1-211ENST00000546215 TBX22Q9Y458 520 aa30.15■■■□□ 2.42
SCARB1-211ENST00000546215 DCAF11Q8TEB1 546 aa30.14■■■□□ 2.42
SCARB1-211ENST00000546215 ZNF335Q9H4Z2 1342 aaPredicted RBP30.14■■■□□ 2.42
SCARB1-211ENST00000546215 MYOM2P54296 1465 aa30.13■■■□□ 2.41
SCARB1-211ENST00000546215 CLSPNQ9HAW4 1339 aa30.12■■■□□ 2.41
SCARB1-211ENST00000546215 STAC3Q96MF2 364 aa30.11■■■□□ 2.41
SCARB1-211ENST00000546215 DIP2AQ14689 1571 aa30.11■■■□□ 2.41
SCARB1-211ENST00000546215 NRXN1Q9ULB1 1477 aa30.1■■■□□ 2.41
SCARB1-211ENST00000546215 KDM2AQ9Y2K7 1162 aa30.1■■■□□ 2.41
SCARB1-211ENST00000546215 CCER1Q8TC90 406 aaPredicted RBP30.09■■■□□ 2.41
SCARB1-211ENST00000546215 PIK3C2GO75747 1445 aa30.09■■■□□ 2.41
SCARB1-211ENST00000546215 L3MBTL2Q969R5 705 aa30.08■■■□□ 2.41
SCARB1-211ENST00000546215 LTBP4Q8N2S1 1624 aa30.06■■■□□ 2.4
SCARB1-211ENST00000546215 ALKQ9UM73 1620 aa30.06■■■□□ 2.4
SCARB1-211ENST00000546215 STRCP1A6NGW2 1772 aa30.03■■■□□ 2.4
SCARB1-211ENST00000546215 METP08581 1390 aa30.03■■■□□ 2.4
SCARB1-211ENST00000546215 PIK3R4Q99570 1358 aa30.03■■■□□ 2.4
SCARB1-211ENST00000546215 SETD1AO15047 1707 aaKnown RBP30.03■■■□□ 2.4
SCARB1-211ENST00000546215 KCNA6P17658 529 aa30.03■■■□□ 2.4
SCARB1-211ENST00000546215 CHD2O14647 1828 aaKnown RBP30.01■■■□□ 2.39
SCARB1-211ENST00000546215 C14orf93Q9H972 538 aaKnown RBP29.99■■■□□ 2.39
SCARB1-211ENST00000546215 PTPRUQ92729 1446 aa29.99■■■□□ 2.39
SCARB1-211ENST00000546215 TONSLQ96HA7 1378 aa29.98■■■□□ 2.39
SCARB1-211ENST00000546215 NWD1Q149M9 1564 aa29.97■■■□□ 2.39
SCARB1-211ENST00000546215 CPS1P31327 1500 aa29.97■■■□□ 2.39
SCARB1-211ENST00000546215 CFAP70Q5T0N1 1121 aa29.97■■■□□ 2.39
SCARB1-211ENST00000546215 AMOTL2Q9Y2J4 779 aa29.94■■■□□ 2.38
SCARB1-211ENST00000546215 PRAG1Q86YV5 1406 aa29.94■■■□□ 2.38
SCARB1-211ENST00000546215 LAMC1P11047 1609 aa29.92■■■□□ 2.38
SCARB1-211ENST00000546215 ASXL1Q8IXJ9 1541 aa29.91■■■□□ 2.38
SCARB1-211ENST00000546215 TMEM132EQ6IEE7 984 aa29.9■■■□□ 2.38
SCARB1-211ENST00000546215 CERKQ8TCT0 537 aa29.9■■■□□ 2.38
SCARB1-211ENST00000546215 NKTRP30414 1462 aaKnown RBP29.9■■■□□ 2.38
SCARB1-211ENST00000546215 LRRC7Q96NW7 1537 aa29.89■■■□□ 2.38
SCARB1-211ENST00000546215 XRN1Q8IZH2 1706 aaKnown RBP29.89■■■□□ 2.38
SCARB1-211ENST00000546215 TIMELESSQ9UNS1 1208 aa29.86■■■□□ 2.37
SCARB1-211ENST00000546215 PROSER2Q86WR7 435 aaPredicted RBP29.86■■■□□ 2.37
SCARB1-211ENST00000546215 ADGRB1O14514 1584 aa29.84■■■□□ 2.37
SCARB1-211ENST00000546215 LRPPRCP42704 1394 aaKnown RBP29.84■■■□□ 2.37
SCARB1-211ENST00000546215 KIAA1210Q9ULL0 1709 aa29.83■■■□□ 2.37
SCARB1-211ENST00000546215 NBPF8Q3BBV2 869 aa29.83■■■□□ 2.37
SCARB1-211ENST00000546215 YTHDC2Q9H6S0 1430 aaKnown RBP29.83■■■□□ 2.37
SCARB1-211ENST00000546215 TMEM94Q12767 1356 aa29.82■■■□□ 2.36
SCARB1-211ENST00000546215 RBM33Q96EV2 1170 aaKnown RBP29.81■■■□□ 2.36
SCARB1-211ENST00000546215 ABCC11Q96J66 1382 aa29.81■■■□□ 2.36
SCARB1-211ENST00000546215 STK26Q9P289 416 aa29.81■■■□□ 2.36
SCARB1-211ENST00000546215 XIRP1Q702N8 1843 aaKnown RBP29.8■■■□□ 2.36
SCARB1-211ENST00000546215 IQSEC2Q5JU85 1478 aa29.8■■■□□ 2.36
SCARB1-211ENST00000546215 NBPF1Q3BBV0 1214 aa29.8■■■□□ 2.36
SCARB1-211ENST00000546215 TECPR2O15040 1411 aa29.79■■■□□ 2.36
SCARB1-211ENST00000546215 PTCH1Q13635 1447 aa29.79■■■□□ 2.36
SCARB1-211ENST00000546215 ROBO2Q9HCK4 1378 aa29.79■■■□□ 2.36
SCARB1-211ENST00000546215 TRPM1Q7Z4N2 1603 aa29.76■■■□□ 2.36
SCARB1-211ENST00000546215 KNDC1Q76NI1 1749 aa29.76■■■□□ 2.35
SCARB1-211ENST00000546215 NCOA3Q9Y6Q9 1424 aa29.75■■■□□ 2.35
SCARB1-211ENST00000546215 SIRT1Q96EB6 747 aa29.72■■■□□ 2.35
SCARB1-211ENST00000546215 TRAK1Q9UPV9 953 aa29.71■■■□□ 2.35
SCARB1-211ENST00000546215 WAPLQ7Z5K2 1190 aa29.69■■■□□ 2.34
SCARB1-211ENST00000546215 FAM135BQ49AJ0 1406 aa29.69■■■□□ 2.34
SCARB1-211ENST00000546215 DLC1Q96QB1 1528 aa29.69■■■□□ 2.34
SCARB1-211ENST00000546215 ROCK2O75116 1388 aaKnown RBP29.68■■■□□ 2.34
SCARB1-211ENST00000546215 RALGAPBQ86X10 1494 aa29.67■■■□□ 2.34
SCARB1-211ENST00000546215 PLEKHH1Q9ULM0 1364 aa29.67■■■□□ 2.34
SCARB1-211ENST00000546215 C14orf37Q86TY3 774 aa29.66■■■□□ 2.34
SCARB1-211ENST00000546215 C19orf44Q9H6X5 657 aa29.65■■■□□ 2.34
SCARB1-211ENST00000546215 MSH6P52701 1360 aa29.65■■■□□ 2.34
SCARB1-211ENST00000546215 GPRASP1Q5JY77 1395 aa29.65■■■□□ 2.34
SCARB1-211ENST00000546215 PRAM1Q96QH2 718 aa29.64■■■□□ 2.34
SCARB1-211ENST00000546215 ADGRL3Q9HAR2 1447 aa29.63■■■□□ 2.33
SCARB1-211ENST00000546215 ARHGEF28Q8N1W1 1705 aaKnown RBP29.61■■■□□ 2.33
SCARB1-211ENST00000546215 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.61■■■□□ 2.33
SCARB1-211ENST00000546215 NALCNQ8IZF0 1738 aa29.61■■■□□ 2.33
SCARB1-211ENST00000546215 UBAP1LF5GYI3 381 aa29.6■■■□□ 2.33
SCARB1-211ENST00000546215 POGKQ9P215 609 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms