RNA–Protein interactions for RNA: ENST00000545377.5

ARHGEF28-214, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ARHGEF28, Length 6,351 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-214ENST00000545377 SLC4A3P48751 1232 aa21.32■■□□□ 1
ARHGEF28-214ENST00000545377 CCAR2Q8N163 923 aaKnown RBP21.32■■□□□ 1
ARHGEF28-214ENST00000545377 PLIN1O60240 522 aa21.32■■□□□ 1
ARHGEF28-214ENST00000545377 DDX58O95786 925 aaKnown RBP21.32■■□□□ 1
ARHGEF28-214ENST00000545377 CPLX2Q6PUV4 134 aaKnown RBP21.31■■□□□ 1
ARHGEF28-214ENST00000545377 PANK3Q9H999 370 aa21.31■■□□□ 1
ARHGEF28-214ENST00000545377 L3MBTL2Q969R5 705 aa21.31■■□□□ 1
ARHGEF28-214ENST00000545377 CGNL1Q0VF96 1302 aa21.31■■□□□ 1
ARHGEF28-214ENST00000545377 AIMP1Q12904 312 aaKnown RBP21.31■■□□□ 1
ARHGEF28-214ENST00000545377 NUTM2BA6NNL0 878 aaPredicted RBP21.3■■□□□ 1
ARHGEF28-214ENST00000545377 NUTM2EB1AL46 878 aaPredicted RBP21.3■■□□□ 1
ARHGEF28-214ENST00000545377 IKQ13123 557 aaPredicted RBP21.3■■□□□ 1
ARHGEF28-214ENST00000545377 NUTM2AQ8IVF1 878 aaPredicted RBP21.3■■□□□ 1
ARHGEF28-214ENST00000545377 ERICH2A1L162 156 aa21.3■■□□□ 1
ARHGEF28-214ENST00000545377 CPLX1O14810 134 aa21.29■■□□□ 1
ARHGEF28-214ENST00000545377 ANO2Q9NQ90 1003 aa21.29■■□□□ 1
ARHGEF28-214ENST00000545377 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.29■■□□□ 1
ARHGEF28-214ENST00000545377 TRDNQ13061 729 aa21.29■■□□□ 1
ARHGEF28-214ENST00000545377 RAB3GAP2Q9H2M9 1393 aa21.28■■□□□ 1
ARHGEF28-214ENST00000545377 CCDC47Q96A33 483 aaKnown RBP21.28■■□□□ 1
ARHGEF28-214ENST00000545377 TPM1P09493 284 aa21.27■■□□□ 1
ARHGEF28-214ENST00000545377 FOSBP53539 338 aa21.27■■□□□ 1
ARHGEF28-214ENST00000545377 G3BP1Q13283 466 aaKnown RBP eCLIP21.26■□□□□ 0.99
ARHGEF28-214ENST00000545377 R3HCC1Q9Y3T6 440 aaKnown RBP21.26■□□□□ 0.99
ARHGEF28-214ENST00000545377 PHF14O94880 888 aa21.26■□□□□ 0.99
ARHGEF28-214ENST00000545377 CCDC144AA2RUR9 1427 aa21.26■□□□□ 0.99
ARHGEF28-214ENST00000545377 NLRP13Q86W25 1043 aa21.26■□□□□ 0.99
ARHGEF28-214ENST00000545377 FHOD3Q2V2M9 1422 aa21.25■□□□□ 0.99
ARHGEF28-214ENST00000545377 CCDC18Q5T9S5 1454 aa21.25■□□□□ 0.99
ARHGEF28-214ENST00000545377 GOLGA6L19H0YKK7 550 aa21.25■□□□□ 0.99
ARHGEF28-214ENST00000545377 RIC3Q7Z5B4 369 aa21.25■□□□□ 0.99
ARHGEF28-214ENST00000545377 NEUROD6Q96NK8 337 aa21.25■□□□□ 0.99
ARHGEF28-214ENST00000545377 FKBP5Q13451 457 aaPredicted RBP21.25■□□□□ 0.99
ARHGEF28-214ENST00000545377 STRN4Q9NRL3 753 aa21.25■□□□□ 0.99
ARHGEF28-214ENST00000545377 UACAQ9BZF9 1416 aa21.24■□□□□ 0.99
ARHGEF28-214ENST00000545377 GOLGA6L3A6NEY3 463 aa21.24■□□□□ 0.99
ARHGEF28-214ENST00000545377 BECN2A8MW95 431 aa21.24■□□□□ 0.99
ARHGEF28-214ENST00000545377 CHMP4CQ96CF2 233 aa21.24■□□□□ 0.99
ARHGEF28-214ENST00000545377 TMEM132AQ24JP5 1023 aa21.24■□□□□ 0.99
ARHGEF28-214ENST00000545377 PATL2C9JE40 543 aaKnown RBP21.24■□□□□ 0.99
ARHGEF28-214ENST00000545377 RUFY2Q8WXA3 655 aa21.23■□□□□ 0.99
ARHGEF28-214ENST00000545377 ST20-MTHFSA0A0A6YYL1 179 aa21.22■□□□□ 0.99
ARHGEF28-214ENST00000545377 KDM4AO75164 1064 aa21.22■□□□□ 0.99
ARHGEF28-214ENST00000545377 DIAPH1O60610 1272 aaKnown RBP21.22■□□□□ 0.99
ARHGEF28-214ENST00000545377 RBM42Q9BTD8 480 aaKnown RBP21.22■□□□□ 0.99
ARHGEF28-214ENST00000545377 DEKP35659 375 aaKnown RBP21.22■□□□□ 0.99
ARHGEF28-214ENST00000545377 PIP4K2BP78356 416 aa21.21■□□□□ 0.99
ARHGEF28-214ENST00000545377 TNNT3P45378 269 aaPredicted RBP21.21■□□□□ 0.99
ARHGEF28-214ENST00000545377 TSPYL4Q9UJ04 414 aa21.2■□□□□ 0.98
ARHGEF28-214ENST00000545377 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.2■□□□□ 0.98
ARHGEF28-214ENST00000545377 WASHC4Q2M389 1173 aa21.2■□□□□ 0.98
ARHGEF28-214ENST00000545377 ZKSCAN1P17029 563 aaPredicted RBP21.2■□□□□ 0.98
ARHGEF28-214ENST00000545377 ZKSCAN2Q63HK3 967 aa21.19■□□□□ 0.98
ARHGEF28-214ENST00000545377 ABCC8Q09428 1581 aa21.19■□□□□ 0.98
ARHGEF28-214ENST00000545377 PTPRGP23470 1445 aa21.19■□□□□ 0.98
ARHGEF28-214ENST00000545377 PAF1Q8N7H5 531 aa21.19■□□□□ 0.98
ARHGEF28-214ENST00000545377 RIPK4P57078 832 aa21.18■□□□□ 0.98
ARHGEF28-214ENST00000545377 CT47A1Q5JQC4 288 aaPredicted RBP21.18■□□□□ 0.98
ARHGEF28-214ENST00000545377 HMOX1P09601 288 aa21.18■□□□□ 0.98
ARHGEF28-214ENST00000545377 WASHC2AQ641Q2 1341 aa21.18■□□□□ 0.98
ARHGEF28-214ENST00000545377 ODF2Q5BJF6 829 aa21.17■□□□□ 0.98
ARHGEF28-214ENST00000545377 ESCO1Q5FWF5 840 aa21.16■□□□□ 0.98
ARHGEF28-214ENST00000545377 VPS8Q8N3P4 1428 aa21.16■□□□□ 0.98
ARHGEF28-214ENST00000545377 ANKRD20A12PQ8NF67 263 aa21.15■□□□□ 0.98
ARHGEF28-214ENST00000545377 IPO7O95373 1038 aaKnown RBP21.15■□□□□ 0.98
ARHGEF28-214ENST00000545377 ZFYVE27Q5T4F4 411 aa21.15■□□□□ 0.98
ARHGEF28-214ENST00000545377 CCDC70Q6NSX1 233 aa21.15■□□□□ 0.98
ARHGEF28-214ENST00000545377 KIF15Q9NS87 1388 aa21.14■□□□□ 0.98
ARHGEF28-214ENST00000545377 ATP6V1DQ9Y5K8 247 aa21.14■□□□□ 0.97
ARHGEF28-214ENST00000545377 RBM19Q9Y4C8 960 aaKnown RBP21.13■□□□□ 0.97
ARHGEF28-214ENST00000545377 WWC2Q6AWC2 1192 aa21.13■□□□□ 0.97
ARHGEF28-214ENST00000545377 PROSER2Q86WR7 435 aaPredicted RBP21.13■□□□□ 0.97
ARHGEF28-214ENST00000545377 NAP1L1P55209 391 aaKnown RBP21.13■□□□□ 0.97
ARHGEF28-214ENST00000545377 COG6Q9Y2V7 657 aa21.12■□□□□ 0.97
ARHGEF28-214ENST00000545377 NLRP6P59044 892 aa21.12■□□□□ 0.97
ARHGEF28-214ENST00000545377 SMARCA2P51531 1590 aa21.11■□□□□ 0.97
ARHGEF28-214ENST00000545377 CCDC88BA6NC98 1476 aa21.11■□□□□ 0.97
ARHGEF28-214ENST00000545377 MYBBP1AQ9BQG0 1328 aaKnown RBP21.11■□□□□ 0.97
ARHGEF28-214ENST00000545377 KIF6Q6ZMV9 814 aa21.11■□□□□ 0.97
ARHGEF28-214ENST00000545377 PHLDB1Q86UU1 1377 aa21.11■□□□□ 0.97
ARHGEF28-214ENST00000545377 RNF20Q5VTR2 975 aa21.11■□□□□ 0.97
ARHGEF28-214ENST00000545377 BICD2Q8TD16 824 aa21.1■□□□□ 0.97
ARHGEF28-214ENST00000545377 RALYLQ86SE5 291 aaKnown RBP21.1■□□□□ 0.97
ARHGEF28-214ENST00000545377 ZNF592Q92610 1267 aa21.1■□□□□ 0.97
ARHGEF28-214ENST00000545377 ATP2B2Q01814 1243 aa21.09■□□□□ 0.97
ARHGEF28-214ENST00000545377 SAFBQ15424 915 aaKnown RBP eCLIP21.09■□□□□ 0.97
ARHGEF28-214ENST00000545377 HOOK1Q9UJC3 728 aaKnown RBP21.09■□□□□ 0.97
ARHGEF28-214ENST00000545377 E9PSI1 815 aa21.09■□□□□ 0.97
ARHGEF28-214ENST00000545377 ABTB2Q8N961 1025 aa21.09■□□□□ 0.97
ARHGEF28-214ENST00000545377 APAF1O14727 1248 aa21.08■□□□□ 0.97
ARHGEF28-214ENST00000545377 EPS15P42566 896 aa21.08■□□□□ 0.97
ARHGEF28-214ENST00000545377 PDE3BQ13370 1112 aa21.08■□□□□ 0.96
ARHGEF28-214ENST00000545377 DDX49Q9Y6V7 483 aaKnown RBP21.08■□□□□ 0.96
ARHGEF28-214ENST00000545377 VPS37CA5D8V6 355 aaPredicted RBP21.06■□□□□ 0.96
ARHGEF28-214ENST00000545377 ZNF428Q96B54 188 aa21.06■□□□□ 0.96
ARHGEF28-214ENST00000545377 RBM5P52756 815 aaKnown RBP eCLIP21.06■□□□□ 0.96
ARHGEF28-214ENST00000545377 GPRASP1Q5JY77 1395 aa21.06■□□□□ 0.96
ARHGEF28-214ENST00000545377 CABP2Q9NPB3 220 aa21.05■□□□□ 0.96
ARHGEF28-214ENST00000545377 API5Q9BZZ5 524 aaKnown RBP21.05■□□□□ 0.96
ARHGEF28-214ENST00000545377 BRMS1Q9HCU9 246 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms