RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 TRPM2O94759 1503 aa34.83■■■■□ 3.17
CHFR-222ENST00000544093 PPP1R15AO75807 674 aaPredicted RBP34.83■■■■□ 3.17
CHFR-222ENST00000544093 PLEKHG1Q9ULL1 1385 aa34.82■■■■□ 3.16
CHFR-222ENST00000544093 UBAP1LF5GYI3 381 aa34.81■■■■□ 3.16
CHFR-222ENST00000544093 SLC4A1APQ9BWU0 796 aaKnown RBP34.8■■■■□ 3.16
CHFR-222ENST00000544093 LRRC7Q96NW7 1537 aa34.78■■■■□ 3.16
CHFR-222ENST00000544093 BCANQ96GW7 911 aa34.78■■■■□ 3.16
CHFR-222ENST00000544093 TOM1O60784 492 aa34.75■■■■□ 3.15
CHFR-222ENST00000544093 SLC26A8Q96RN1 970 aa34.74■■■■□ 3.15
CHFR-222ENST00000544093 CLTCL1P53675 1640 aa34.73■■■■□ 3.15
CHFR-222ENST00000544093 KIF1BO60333 1816 aa34.72■■■■□ 3.15
CHFR-222ENST00000544093 KCNA6P17658 529 aa34.71■■■■□ 3.15
CHFR-222ENST00000544093 SETD5Q9C0A6 1442 aa34.7■■■■□ 3.15
CHFR-222ENST00000544093 DIP2AQ14689 1571 aa34.69■■■■□ 3.14
CHFR-222ENST00000544093 NWD1Q149M9 1564 aa34.68■■■■□ 3.14
CHFR-222ENST00000544093 TBX22Q9Y458 520 aa34.67■■■■□ 3.14
CHFR-222ENST00000544093 NKTRP30414 1462 aaKnown RBP34.66■■■■□ 3.14
CHFR-222ENST00000544093 ZNF326Q5BKZ1 582 aaKnown RBP34.66■■■■□ 3.14
CHFR-222ENST00000544093 CHD2O14647 1828 aaKnown RBP34.62■■■■□ 3.13
CHFR-222ENST00000544093 MPHOSPH9Q99550 1183 aa34.61■■■■□ 3.13
CHFR-222ENST00000544093 PIK3R4Q99570 1358 aa34.61■■■■□ 3.13
CHFR-222ENST00000544093 XIRP1Q702N8 1843 aaKnown RBP34.6■■■■□ 3.13
CHFR-222ENST00000544093 NUTM2DQ5VT03 806 aaPredicted RBP34.6■■■■□ 3.13
CHFR-222ENST00000544093 ADAMTS13Q76LX8 1427 aa34.6■■■■□ 3.13
CHFR-222ENST00000544093 NEXMIFQ5QGS0 1516 aa34.57■■■■□ 3.12
CHFR-222ENST00000544093 SETBP1Q9Y6X0 1596 aa34.57■■■■□ 3.12
CHFR-222ENST00000544093 TMEM94Q12767 1356 aa34.55■■■■□ 3.12
CHFR-222ENST00000544093 PROSER2Q86WR7 435 aaPredicted RBP34.55■■■■□ 3.12
CHFR-222ENST00000544093 SCAF1Q9H7N4 1312 aaKnown RBP34.55■■■■□ 3.12
CHFR-222ENST00000544093 RAB3GAP2Q9H2M9 1393 aa34.54■■■■□ 3.12
CHFR-222ENST00000544093 PIP4K2BP78356 416 aa34.54■■■■□ 3.12
CHFR-222ENST00000544093 SENP3Q9H4L4 574 aaPredicted RBP34.54■■■■□ 3.12
CHFR-222ENST00000544093 ALKQ9UM73 1620 aa34.53■■■■□ 3.12
CHFR-222ENST00000544093 CCDC144AA2RUR9 1427 aa34.53■■■■□ 3.12
CHFR-222ENST00000544093 RPGRIP1LQ68CZ1 1315 aa34.53■■■■□ 3.12
CHFR-222ENST00000544093 NRXN3Q9Y4C0 1643 aa34.5■■■■□ 3.11
CHFR-222ENST00000544093 FOXD1Q16676 465 aa34.49■■■■□ 3.11
CHFR-222ENST00000544093 VGFO15240 615 aaPredicted RBP34.47■■■■□ 3.11
CHFR-222ENST00000544093 NCOA3Q9Y6Q9 1424 aa34.47■■■■□ 3.11
CHFR-222ENST00000544093 HRCP23327 699 aa34.45■■■■□ 3.11
CHFR-222ENST00000544093 MSH6P52701 1360 aa34.43■■■■□ 3.1
CHFR-222ENST00000544093 PPLO60437 1756 aa34.42■■■■□ 3.1
CHFR-222ENST00000544093 AMOTL2Q9Y2J4 779 aa34.38■■■■□ 3.09
CHFR-222ENST00000544093 HSPA1LP34931 641 aa34.37■■■■□ 3.09
CHFR-222ENST00000544093 XRN1Q8IZH2 1706 aaKnown RBP34.36■■■■□ 3.09
CHFR-222ENST00000544093 SPATA31E1Q6ZUB1 1445 aa34.36■■■■□ 3.09
CHFR-222ENST00000544093 RBM33Q96EV2 1170 aaKnown RBP34.35■■■■□ 3.09
CHFR-222ENST00000544093 PTPRUQ92729 1446 aa34.35■■■■□ 3.09
CHFR-222ENST00000544093 FAM135BQ49AJ0 1406 aa34.32■■■■□ 3.08
CHFR-222ENST00000544093 METP08581 1390 aa34.32■■■■□ 3.08
CHFR-222ENST00000544093 ANKRD30BQ9BXX2 1392 aa34.32■■■■□ 3.08
CHFR-222ENST00000544093 C14orf37Q86TY3 774 aa34.3■■■■□ 3.08
CHFR-222ENST00000544093 IFT172Q9UG01 1749 aa34.29■■■■□ 3.08
CHFR-222ENST00000544093 SETD1AO15047 1707 aaKnown RBP34.28■■■■□ 3.08
CHFR-222ENST00000544093 C19orf44Q9H6X5 657 aa34.27■■■■□ 3.08
CHFR-222ENST00000544093 RGL3Q3MIN7 710 aa34.26■■■■□ 3.08
CHFR-222ENST00000544093 CADPS2Q86UW7 1296 aa34.24■■■■□ 3.07
CHFR-222ENST00000544093 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.24■■■■□ 3.07
CHFR-222ENST00000544093 SLAIN2Q9P270 581 aa34.23■■■■□ 3.07
CHFR-222ENST00000544093 ROBO1Q9Y6N7 1651 aa34.22■■■■□ 3.07
CHFR-222ENST00000544093 DCCP43146 1447 aa34.21■■■■□ 3.07
CHFR-222ENST00000544093 ATF3P18847 181 aa34.2■■■■□ 3.07
CHFR-222ENST00000544093 DISP3Q9P2K9 1392 aa34.19■■■■□ 3.06
CHFR-222ENST00000544093 PTCH1Q13635 1447 aa34.19■■■■□ 3.06
CHFR-222ENST00000544093 PRAG1Q86YV5 1406 aa34.19■■■■□ 3.06
CHFR-222ENST00000544093 ADGRF5Q8IZF2 1346 aa34.17■■■■□ 3.06
CHFR-222ENST00000544093 PIK3C2GO75747 1445 aa34.13■■■■□ 3.05
CHFR-222ENST00000544093 MYOM2P54296 1465 aa34.13■■■■□ 3.05
CHFR-222ENST00000544093 ADGRL3Q9HAR2 1447 aa34.12■■■■□ 3.05
CHFR-222ENST00000544093 NRXN1Q9ULB1 1477 aa34.07■■■■□ 3.05
CHFR-222ENST00000544093 NALCNQ8IZF0 1738 aa34.07■■■■□ 3.04
CHFR-222ENST00000544093 LAMC1P11047 1609 aa34.06■■■■□ 3.04
CHFR-222ENST00000544093 MED1Q15648 1581 aaPredicted RBP34.06■■■■□ 3.04
CHFR-222ENST00000544093 ROBO2Q9HCK4 1378 aa34.05■■■■□ 3.04
CHFR-222ENST00000544093 STAC3Q96MF2 364 aa34.03■■■■□ 3.04
CHFR-222ENST00000544093 PHLPP1O60346 1717 aa34.03■■■■□ 3.04
CHFR-222ENST00000544093 TECPR2O15040 1411 aa34.02■■■■□ 3.04
CHFR-222ENST00000544093 LRPPRCP42704 1394 aaKnown RBP34■■■■□ 3.03
CHFR-222ENST00000544093 KNDC1Q76NI1 1749 aa34■■■■□ 3.03
CHFR-222ENST00000544093 MST1RQ04912 1400 aa33.99■■■■□ 3.03
CHFR-222ENST00000544093 C14orf93Q9H972 538 aaKnown RBP33.99■■■■□ 3.03
CHFR-222ENST00000544093 ABCC11Q96J66 1382 aa33.98■■■■□ 3.03
CHFR-222ENST00000544093 ASXL1Q8IXJ9 1541 aa33.97■■■■□ 3.03
CHFR-222ENST00000544093 AHDC1Q5TGY3 1603 aaPredicted RBP33.97■■■■□ 3.03
CHFR-222ENST00000544093 YTHDC2Q9H6S0 1430 aaKnown RBP33.94■■■■□ 3.02
CHFR-222ENST00000544093 BRINP3Q76B58 766 aa33.93■■■■□ 3.02
CHFR-222ENST00000544093 COL16A1Q07092 1604 aaPredicted RBP33.93■■■■□ 3.02
CHFR-222ENST00000544093 DHX57Q6P158 1386 aaKnown RBP33.91■■■■□ 3.02
CHFR-222ENST00000544093 TMEM132EQ6IEE7 984 aa33.91■■■■□ 3.02
CHFR-222ENST00000544093 STK26Q9P289 416 aa33.91■■■■□ 3.02
CHFR-222ENST00000544093 DCAF11Q8TEB1 546 aa33.9■■■■□ 3.02
CHFR-222ENST00000544093 JCADQ9P266 1359 aa33.89■■■■□ 3.02
CHFR-222ENST00000544093 SIRT1Q96EB6 747 aa33.89■■■■□ 3.02
CHFR-222ENST00000544093 CDC42BPGQ6DT37 1551 aa33.89■■■■□ 3.02
CHFR-222ENST00000544093 CFAP70Q5T0N1 1121 aa33.88■■■■□ 3.01
CHFR-222ENST00000544093 PHF23Q9BUL5 403 aaPredicted RBP33.86■■■■□ 3.01
CHFR-222ENST00000544093 C1orf167Q5SNV9 1468 aa33.86■■■■□ 3.01
CHFR-222ENST00000544093 NHSL1Q5SYE7 1610 aa33.85■■■■□ 3.01
CHFR-222ENST00000544093 KDM2AQ9Y2K7 1162 aa33.83■■■■□ 3.01
CHFR-222ENST00000544093 WAPLQ7Z5K2 1190 aa33.81■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms