RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 SLIT1O75093 1534 aa8.49□□□□□ -1.05
ABCF1-207ENST00000542772 LTKP29376 864 aa8.49□□□□□ -1.05
ABCF1-207ENST00000542772 LMTK3Q96Q04 1460 aa8.49□□□□□ -1.05
ABCF1-207ENST00000542772 MYO5BQ9ULV0 1848 aa8.49□□□□□ -1.05
ABCF1-207ENST00000542772 ZNF326Q5BKZ1 582 aaKnown RBP8.48□□□□□ -1.05
ABCF1-207ENST00000542772 TXNDC2Q86VQ3 553 aa8.48□□□□□ -1.05
ABCF1-207ENST00000542772 ANKLE2Q86XL3 938 aa8.48□□□□□ -1.05
ABCF1-207ENST00000542772 DCAF11Q8TEB1 546 aa8.48□□□□□ -1.05
ABCF1-207ENST00000542772 EID1Q9Y6B2 187 aa8.47□□□□□ -1.05
ABCF1-207ENST00000542772 NEXMIFQ5QGS0 1516 aa8.47□□□□□ -1.05
ABCF1-207ENST00000542772 RIMS2Q9UQ26 1411 aa8.46□□□□□ -1.05
ABCF1-207ENST00000542772 IFT172Q9UG01 1749 aa8.46□□□□□ -1.05
ABCF1-207ENST00000542772 NRXN1Q9ULB1 1477 aa8.46□□□□□ -1.05
ABCF1-207ENST00000542772 PPLO60437 1756 aa8.46□□□□□ -1.05
ABCF1-207ENST00000542772 ADGRF5Q8IZF2 1346 aa8.46□□□□□ -1.06
ABCF1-207ENST00000542772 TONSLQ96HA7 1378 aa8.46□□□□□ -1.06
ABCF1-207ENST00000542772 MED14O60244 1454 aa8.45□□□□□ -1.06
ABCF1-207ENST00000542772 AEBP2Q6ZN18 517 aaPredicted RBP8.45□□□□□ -1.06
ABCF1-207ENST00000542772 C14orf93Q9H972 538 aaKnown RBP8.45□□□□□ -1.06
ABCF1-207ENST00000542772 KDM2AQ9Y2K7 1162 aa8.45□□□□□ -1.06
ABCF1-207ENST00000542772 TBX22Q9Y458 520 aa8.45□□□□□ -1.06
ABCF1-207ENST00000542772 MYOM2P54296 1465 aa8.45□□□□□ -1.06
ABCF1-207ENST00000542772 ZEB1P37275 1124 aaPredicted RBP8.44□□□□□ -1.06
ABCF1-207ENST00000542772 HSPA2P54652 639 aa8.44□□□□□ -1.06
ABCF1-207ENST00000542772 NBPF8Q3BBV2 869 aa8.44□□□□□ -1.06
ABCF1-207ENST00000542772 PLEKHG1Q9ULL1 1385 aa8.44□□□□□ -1.06
ABCF1-207ENST00000542772 NUTM2DQ5VT03 806 aaPredicted RBP8.43□□□□□ -1.06
ABCF1-207ENST00000542772 NCKAP5LQ9HCH0 1330 aa8.43□□□□□ -1.06
ABCF1-207ENST00000542772 SCAF11Q99590 1463 aaKnown RBP8.43□□□□□ -1.06
ABCF1-207ENST00000542772 STRCQ7RTU9 1775 aa8.43□□□□□ -1.06
ABCF1-207ENST00000542772 DMRT2Q9Y5R5 561 aa8.42□□□□□ -1.06
ABCF1-207ENST00000542772 PIK3C2GO75747 1445 aa8.42□□□□□ -1.06
ABCF1-207ENST00000542772 PRAG1Q86YV5 1406 aa8.42□□□□□ -1.06
ABCF1-207ENST00000542772 ADAMTS13Q76LX8 1427 aa8.41□□□□□ -1.06
ABCF1-207ENST00000542772 CFAP70Q5T0N1 1121 aa8.41□□□□□ -1.06
ABCF1-207ENST00000542772 SETBP1Q9Y6X0 1596 aa8.4□□□□□ -1.06
ABCF1-207ENST00000542772 NPHP4O75161 1426 aaPredicted RBP8.4□□□□□ -1.06
ABCF1-207ENST00000542772 SIRT1Q96EB6 747 aa8.4□□□□□ -1.06
ABCF1-207ENST00000542772 POLR1AO95602 1720 aaPredicted RBP8.4□□□□□ -1.07
ABCF1-207ENST00000542772 KIAA1210Q9ULL0 1709 aa8.4□□□□□ -1.07
ABCF1-207ENST00000542772 ALKQ9UM73 1620 aa8.4□□□□□ -1.07
ABCF1-207ENST00000542772 NRXN3Q9Y4C0 1643 aa8.4□□□□□ -1.07
ABCF1-207ENST00000542772 PIK3R4Q99570 1358 aa8.39□□□□□ -1.07
ABCF1-207ENST00000542772 NBPF1Q3BBV0 1214 aa8.39□□□□□ -1.07
ABCF1-207ENST00000542772 GPRASP1Q5JY77 1395 aa8.38□□□□□ -1.07
ABCF1-207ENST00000542772 SLC26A8Q96RN1 970 aa8.38□□□□□ -1.07
ABCF1-207ENST00000542772 SETD1AO15047 1707 aaKnown RBP8.37□□□□□ -1.07
ABCF1-207ENST00000542772 METP08581 1390 aa8.37□□□□□ -1.07
ABCF1-207ENST00000542772 TRPM1Q7Z4N2 1603 aa8.37□□□□□ -1.07
ABCF1-207ENST00000542772 KCNA6P17658 529 aa8.37□□□□□ -1.07
ABCF1-207ENST00000542772 TMEM132EQ6IEE7 984 aa8.37□□□□□ -1.07
ABCF1-207ENST00000542772 IQGAP1P46940 1657 aa8.37□□□□□ -1.07
ABCF1-207ENST00000542772 LAMC1P11047 1609 aa8.36□□□□□ -1.07
ABCF1-207ENST00000542772 ABCC11Q96J66 1382 aa8.36□□□□□ -1.07
ABCF1-207ENST00000542772 CHD2O14647 1828 aaKnown RBP8.36□□□□□ -1.07
ABCF1-207ENST00000542772 ADGRB1O14514 1584 aa8.36□□□□□ -1.07
ABCF1-207ENST00000542772 DIP2AQ14689 1571 aa8.36□□□□□ -1.07
ABCF1-207ENST00000542772 BCANQ96GW7 911 aa8.36□□□□□ -1.07
ABCF1-207ENST00000542772 RALGAPBQ86X10 1494 aa8.35□□□□□ -1.07
ABCF1-207ENST00000542772 AMOTL2Q9Y2J4 779 aa8.35□□□□□ -1.07
ABCF1-207ENST00000542772 PTPRUQ92729 1446 aa8.35□□□□□ -1.07
ABCF1-207ENST00000542772 LRPPRCP42704 1394 aaKnown RBP8.35□□□□□ -1.07
ABCF1-207ENST00000542772 CARD11Q9BXL7 1154 aa8.34□□□□□ -1.07
ABCF1-207ENST00000542772 YTHDC2Q9H6S0 1430 aaKnown RBP8.34□□□□□ -1.07
ABCF1-207ENST00000542772 ASXL1Q8IXJ9 1541 aa8.34□□□□□ -1.08
ABCF1-207ENST00000542772 TECPR2O15040 1411 aa8.33□□□□□ -1.08
ABCF1-207ENST00000542772 SENP3Q9H4L4 574 aaPredicted RBP8.33□□□□□ -1.08
ABCF1-207ENST00000542772 ROCK2O75116 1388 aaKnown RBP8.33□□□□□ -1.08
ABCF1-207ENST00000542772 FAM135BQ49AJ0 1406 aa8.32□□□□□ -1.08
ABCF1-207ENST00000542772 DLC1Q96QB1 1528 aa8.32□□□□□ -1.08
ABCF1-207ENST00000542772 NCOA3Q9Y6Q9 1424 aa8.31□□□□□ -1.08
ABCF1-207ENST00000542772 SLC24A1O60721 1099 aa8.31□□□□□ -1.08
ABCF1-207ENST00000542772 STK26Q9P289 416 aa8.31□□□□□ -1.08
ABCF1-207ENST00000542772 TRAK1Q9UPV9 953 aa8.31□□□□□ -1.08
ABCF1-207ENST00000542772 STRCP1A6NGW2 1772 aa8.3□□□□□ -1.08
ABCF1-207ENST00000542772 KNDC1Q76NI1 1749 aa8.3□□□□□ -1.08
ABCF1-207ENST00000542772 XRN1Q8IZH2 1706 aaKnown RBP8.3□□□□□ -1.08
ABCF1-207ENST00000542772 EIF4G2P78344 907 aaKnown RBP eCLIP8.3□□□□□ -1.08
ABCF1-207ENST00000542772 WAPLQ7Z5K2 1190 aa8.3□□□□□ -1.08
ABCF1-207ENST00000542772 NWD1Q149M9 1564 aa8.3□□□□□ -1.08
ABCF1-207ENST00000542772 ZNF335Q9H4Z2 1342 aaPredicted RBP8.29□□□□□ -1.08
ABCF1-207ENST00000542772 ST20-MTHFSA0A0A6YYL1 179 aa8.29□□□□□ -1.08
ABCF1-207ENST00000542772 PROSER2Q86WR7 435 aaPredicted RBP8.29□□□□□ -1.08
ABCF1-207ENST00000542772 TESK2Q96S53 571 aa8.29□□□□□ -1.08
ABCF1-207ENST00000542772 ROBO2Q9HCK4 1378 aa8.29□□□□□ -1.08
ABCF1-207ENST00000542772 LTBP4Q8N2S1 1624 aa8.29□□□□□ -1.08
ABCF1-207ENST00000542772 CPS1P31327 1500 aa8.29□□□□□ -1.08
ABCF1-207ENST00000542772 PTCH1Q13635 1447 aa8.29□□□□□ -1.08
ABCF1-207ENST00000542772 NKTRP30414 1462 aaKnown RBP8.28□□□□□ -1.08
ABCF1-207ENST00000542772 SBNO2Q9Y2G9 1366 aa8.28□□□□□ -1.08
ABCF1-207ENST00000542772 HSPA5P11021 654 aaKnown RBP8.28□□□□□ -1.08
ABCF1-207ENST00000542772 PUS7Q96PZ0 661 aaKnown RBP8.28□□□□□ -1.08
ABCF1-207ENST00000542772 PRAM1Q96QH2 718 aa8.28□□□□□ -1.08
ABCF1-207ENST00000542772 CENPJQ9HC77 1338 aaPredicted RBP8.28□□□□□ -1.08
ABCF1-207ENST00000542772 USP47Q96K76 1375 aa8.27□□□□□ -1.09
ABCF1-207ENST00000542772 ARHGEF28Q8N1W1 1705 aaKnown RBP8.27□□□□□ -1.09
ABCF1-207ENST00000542772 POGKQ9P215 609 aa8.27□□□□□ -1.09
ABCF1-207ENST00000542772 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.26□□□□□ -1.09
ABCF1-207ENST00000542772 EIF3AQ14152 1382 aaKnown RBP8.26□□□□□ -1.09
ABCF1-207ENST00000542772 PLEKHH1Q9ULM0 1364 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms