RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 AAMPQ13685 434 aa10.3□□□□□ -0.76
PRKAB1-207ENST00000542698 C14orf37Q86TY3 774 aa10.3□□□□□ -0.76
PRKAB1-207ENST00000542698 TCP11L2Q8N4U5 519 aa10.3□□□□□ -0.76
PRKAB1-207ENST00000542698 SYNJ2O15056 1496 aa10.3□□□□□ -0.76
PRKAB1-207ENST00000542698 ZNF608Q9ULD9 1512 aaPredicted RBP10.3□□□□□ -0.76
PRKAB1-207ENST00000542698 MTHFSP49914 203 aa10.29□□□□□ -0.76
PRKAB1-207ENST00000542698 DDX19BQ9UMR2 479 aa10.29□□□□□ -0.76
PRKAB1-207ENST00000542698 ERBINQ96RT1 1412 aa10.29□□□□□ -0.76
PRKAB1-207ENST00000542698 UGGT2Q9NYU1 1516 aa10.29□□□□□ -0.76
PRKAB1-207ENST00000542698 PTMSP20962 102 aa10.29□□□□□ -0.76
PRKAB1-207ENST00000542698 CAMSAP2Q08AD1 1489 aa10.28□□□□□ -0.76
PRKAB1-207ENST00000542698 SAMD9Q5K651 1589 aa10.28□□□□□ -0.76
PRKAB1-207ENST00000542698 SOX12O15370 315 aa10.28□□□□□ -0.76
PRKAB1-207ENST00000542698 FRAT2O75474 233 aaPredicted RBP10.28□□□□□ -0.76
PRKAB1-207ENST00000542698 TARBP1Q13395 1621 aaKnown RBP10.28□□□□□ -0.76
PRKAB1-207ENST00000542698 ELL2O00472 640 aaPredicted RBP10.28□□□□□ -0.76
PRKAB1-207ENST00000542698 TPRNQ4KMQ1 711 aa10.28□□□□□ -0.76
PRKAB1-207ENST00000542698 DNTTIP2Q5QJE6 756 aaKnown RBP10.28□□□□□ -0.76
PRKAB1-207ENST00000542698 PLB1Q6P1J6 1458 aa10.27□□□□□ -0.76
PRKAB1-207ENST00000542698 C20orf194Q5TEA3 1177 aa10.27□□□□□ -0.76
PRKAB1-207ENST00000542698 ANKRD45Q5TZF3 282 aa10.27□□□□□ -0.76
PRKAB1-207ENST00000542698 SKAP1Q86WV1 359 aa10.27□□□□□ -0.76
PRKAB1-207ENST00000542698 MSNP26038 577 aaKnown RBP10.27□□□□□ -0.77
PRKAB1-207ENST00000542698 HDGFP51858 240 aaKnown RBP10.27□□□□□ -0.77
PRKAB1-207ENST00000542698 SLFN5Q08AF3 891 aa10.27□□□□□ -0.77
PRKAB1-207ENST00000542698 MLECQ14165 292 aa10.27□□□□□ -0.77
PRKAB1-207ENST00000542698 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.27□□□□□ -0.77
PRKAB1-207ENST00000542698 IL27Q8NEV9 243 aa10.27□□□□□ -0.77
PRKAB1-207ENST00000542698 MAGI1Q96QZ7 1491 aaPredicted RBP10.27□□□□□ -0.77
PRKAB1-207ENST00000542698 ARHGAP5Q13017 1502 aa10.27□□□□□ -0.77
PRKAB1-207ENST00000542698 FOXD4L1Q9NU39 408 aa10.26□□□□□ -0.77
PRKAB1-207ENST00000542698 DDX11L8A8MPP1 907 aa10.26□□□□□ -0.77
PRKAB1-207ENST00000542698 RIPK4P57078 832 aa10.26□□□□□ -0.77
PRKAB1-207ENST00000542698 TMEM132EQ6IEE7 984 aa10.26□□□□□ -0.77
PRKAB1-207ENST00000542698 CHMP5Q9NZZ3 219 aa10.26□□□□□ -0.77
PRKAB1-207ENST00000542698 ZBTB7CA1YPR0 619 aa10.26□□□□□ -0.77
PRKAB1-207ENST00000542698 RTF1Q92541 710 aaKnown RBP10.26□□□□□ -0.77
PRKAB1-207ENST00000542698 SLC12A5Q9H2X9 1139 aa10.25□□□□□ -0.77
PRKAB1-207ENST00000542698 RIMBP3CA6NJZ7 1639 aa10.25□□□□□ -0.77
PRKAB1-207ENST00000542698 RIMBP3BA6NNM3 1639 aa10.25□□□□□ -0.77
PRKAB1-207ENST00000542698 RIMBP3Q9UFD9 1639 aa10.25□□□□□ -0.77
PRKAB1-207ENST00000542698 PLEKHG5O94827 1062 aa10.25□□□□□ -0.77
PRKAB1-207ENST00000542698 MCCP23508 829 aa10.25□□□□□ -0.77
PRKAB1-207ENST00000542698 C22orf23Q9BZE7 217 aa10.25□□□□□ -0.77
PRKAB1-207ENST00000542698 LMOD3Q0VAK6 560 aa10.24□□□□□ -0.77
PRKAB1-207ENST00000542698 BRPF3Q9ULD4 1205 aa10.24□□□□□ -0.77
PRKAB1-207ENST00000542698 ARHGEF11O15085 1522 aa10.24□□□□□ -0.77
PRKAB1-207ENST00000542698 DIAPH1O60610 1272 aaKnown RBP10.24□□□□□ -0.77
PRKAB1-207ENST00000542698 PLCB2Q00722 1185 aa10.24□□□□□ -0.77
PRKAB1-207ENST00000542698 PDZRN3Q9UPQ7 1066 aa10.24□□□□□ -0.77
PRKAB1-207ENST00000542698 MINK1Q8N4C8 1332 aaPredicted RBP10.24□□□□□ -0.77
PRKAB1-207ENST00000542698 TCOF1Q13428 1488 aaKnown RBP10.24□□□□□ -0.77
PRKAB1-207ENST00000542698 RSPH6AQ9H0K4 717 aa10.23□□□□□ -0.77
PRKAB1-207ENST00000542698 EIF4G3O43432 1585 aaKnown RBP10.23□□□□□ -0.77
PRKAB1-207ENST00000542698 DUSP27Q5VZP5 1158 aa10.23□□□□□ -0.77
PRKAB1-207ENST00000542698 LNPKQ9C0E8 428 aa10.23□□□□□ -0.77
PRKAB1-207ENST00000542698 GPATCH8Q9UKJ3 1502 aaKnown RBP10.23□□□□□ -0.77
PRKAB1-207ENST00000542698 GGNBP2Q9H3C7 697 aa10.23□□□□□ -0.77
PRKAB1-207ENST00000542698 HMMRO75330 724 aa10.22□□□□□ -0.77
PRKAB1-207ENST00000542698 OS9Q13438 667 aaPredicted RBP10.22□□□□□ -0.77
PRKAB1-207ENST00000542698 KIF16BQ96L93 1317 aa10.22□□□□□ -0.77
PRKAB1-207ENST00000542698 WWC1Q8IX03 1113 aa10.22□□□□□ -0.77
PRKAB1-207ENST00000542698 PLEKHH2Q8IVE3 1493 aa10.21□□□□□ -0.77
PRKAB1-207ENST00000542698 DHX29Q7Z478 1369 aaKnown RBP10.21□□□□□ -0.77
PRKAB1-207ENST00000542698 CCDC141Q6ZP82 1450 aa10.21□□□□□ -0.77
PRKAB1-207ENST00000542698 WDR63Q8IWG1 891 aa10.21□□□□□ -0.78
PRKAB1-207ENST00000542698 CABP2Q9NPB3 220 aa10.21□□□□□ -0.78
PRKAB1-207ENST00000542698 SKOR2Q2VWA4 1001 aaPredicted RBP10.21□□□□□ -0.78
PRKAB1-207ENST00000542698 DDX49Q9Y6V7 483 aaKnown RBP10.21□□□□□ -0.78
PRKAB1-207ENST00000542698 SLC4A10Q6U841 1118 aa10.2□□□□□ -0.78
PRKAB1-207ENST00000542698 GRIN2AQ12879 1464 aa10.2□□□□□ -0.78
PRKAB1-207ENST00000542698 ST18O60284 1047 aa10.2□□□□□ -0.78
PRKAB1-207ENST00000542698 KCNJ4P48050 445 aa10.2□□□□□ -0.78
PRKAB1-207ENST00000542698 EXOSC9Q06265 439 aaKnown RBP10.2□□□□□ -0.78
PRKAB1-207ENST00000542698 STK31Q9BXU1 1019 aa10.19□□□□□ -0.78
PRKAB1-207ENST00000542698 SCAPERQ9BY12 1400 aa10.19□□□□□ -0.78
PRKAB1-207ENST00000542698 LRRIQ1Q96JM4 1722 aa10.18□□□□□ -0.78
PRKAB1-207ENST00000542698 RALGAPBQ86X10 1494 aa10.18□□□□□ -0.78
PRKAB1-207ENST00000542698 TSR2Q969E8 191 aaKnown RBP10.18□□□□□ -0.78
PRKAB1-207ENST00000542698 API5Q9BZZ5 524 aaKnown RBP10.18□□□□□ -0.78
PRKAB1-207ENST00000542698 DISP3Q9P2K9 1392 aa10.18□□□□□ -0.78
PRKAB1-207ENST00000542698 NINLQ9Y2I6 1382 aa10.18□□□□□ -0.78
PRKAB1-207ENST00000542698 PBRM1Q86U86 1689 aa10.18□□□□□ -0.78
PRKAB1-207ENST00000542698 MAGI3Q5TCQ9 1506 aa10.18□□□□□ -0.78
PRKAB1-207ENST00000542698 NUP153P49790 1475 aaKnown RBP10.18□□□□□ -0.78
PRKAB1-207ENST00000542698 PER1O15534 1290 aaPredicted RBP10.17□□□□□ -0.78
PRKAB1-207ENST00000542698 KIAA1211Q6ZU35 1233 aa10.17□□□□□ -0.78
PRKAB1-207ENST00000542698 PARD3Q8TEW0 1356 aa10.17□□□□□ -0.78
PRKAB1-207ENST00000542698 RNF123Q5XPI4 1314 aa10.17□□□□□ -0.78
PRKAB1-207ENST00000542698 TRIM6-TRIM34B2RNG4 842 aa10.17□□□□□ -0.78
PRKAB1-207ENST00000542698 ADAMTS12P58397 1594 aa10.17□□□□□ -0.78
PRKAB1-207ENST00000542698 COG3Q96JB2 828 aa10.17□□□□□ -0.78
PRKAB1-207ENST00000542698 TRAK2O60296 914 aa10.17□□□□□ -0.78
PRKAB1-207ENST00000542698 MVPQ14764 893 aaKnown RBP10.17□□□□□ -0.78
PRKAB1-207ENST00000542698 GOLGA6L4A6NEF3 574 aa10.16□□□□□ -0.78
PRKAB1-207ENST00000542698 HMOX1P09601 288 aa10.16□□□□□ -0.78
PRKAB1-207ENST00000542698 CT47B1P0C2W7 299 aaPredicted RBP10.16□□□□□ -0.78
PRKAB1-207ENST00000542698 GNAI1P63096 354 aa10.16□□□□□ -0.78
PRKAB1-207ENST00000542698 TESK2Q96S53 571 aa10.16□□□□□ -0.78
PRKAB1-207ENST00000542698 RARSP54136 660 aaKnown RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms