RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 FANCIQ9NVI1 1328 aa7.07□□□□□ -1.28
ATPAF1-212ENST00000542495 IRX6P78412 446 aaPredicted RBP7.07□□□□□ -1.28
ATPAF1-212ENST00000542495 TRPM1Q7Z4N2 1603 aa7.07□□□□□ -1.28
ATPAF1-212ENST00000542495 LAMC1P11047 1609 aa7.06□□□□□ -1.28
ATPAF1-212ENST00000542495 HNRNPMP52272 730 aaKnown RBP eCLIP7.06□□□□□ -1.28
ATPAF1-212ENST00000542495 PNISRQ8TF01 805 aaKnown RBP7.06□□□□□ -1.28
ATPAF1-212ENST00000542495 LRPPRCP42704 1394 aaKnown RBP7.06□□□□□ -1.28
ATPAF1-212ENST00000542495 PLXNC1O60486 1568 aa7.06□□□□□ -1.28
ATPAF1-212ENST00000542495 DIP2BQ9P265 1576 aa7.06□□□□□ -1.28
ATPAF1-212ENST00000542495 PRAG1Q86YV5 1406 aa7.06□□□□□ -1.28
ATPAF1-212ENST00000542495 CARD11Q9BXL7 1154 aa7.05□□□□□ -1.28
ATPAF1-212ENST00000542495 CLEC11AQ9Y240 323 aa7.05□□□□□ -1.28
ATPAF1-212ENST00000542495 GPRASP1Q5JY77 1395 aa7.05□□□□□ -1.28
ATPAF1-212ENST00000542495 PLA2R1Q13018 1463 aa7.05□□□□□ -1.28
ATPAF1-212ENST00000542495 IQGAP3Q86VI3 1631 aa7.05□□□□□ -1.28
ATPAF1-212ENST00000542495 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.05□□□□□ -1.28
ATPAF1-212ENST00000542495 TTC37Q6PGP7 1564 aa7.05□□□□□ -1.28
ATPAF1-212ENST00000542495 ATP10AO60312 1499 aa7.05□□□□□ -1.28
ATPAF1-212ENST00000542495 MAGI2Q86UL8 1455 aa7.05□□□□□ -1.28
ATPAF1-212ENST00000542495 BRD4O60885 1362 aaPredicted RBP7.05□□□□□ -1.28
ATPAF1-212ENST00000542495 POTEMA6NI47 508 aa7.05□□□□□ -1.28
ATPAF1-212ENST00000542495 ZNF326Q5BKZ1 582 aaKnown RBP7.05□□□□□ -1.28
ATPAF1-212ENST00000542495 CHADLQ6NUI6 762 aa7.05□□□□□ -1.28
ATPAF1-212ENST00000542495 NUDCQ9Y266 331 aa7.05□□□□□ -1.28
ATPAF1-212ENST00000542495 SYCP2Q9BX26 1530 aa7.04□□□□□ -1.28
ATPAF1-212ENST00000542495 PLEKHH2Q8IVE3 1493 aa7.04□□□□□ -1.28
ATPAF1-212ENST00000542495 PLEKHG5O94827 1062 aa7.04□□□□□ -1.28
ATPAF1-212ENST00000542495 NKX1-1Q15270 411 aaPredicted RBP7.04□□□□□ -1.28
ATPAF1-212ENST00000542495 ABCC2Q92887 1545 aa7.03□□□□□ -1.28
ATPAF1-212ENST00000542495 ST20-MTHFSA0A0A6YYL1 179 aa7.03□□□□□ -1.28
ATPAF1-212ENST00000542495 RALBP1Q15311 655 aa7.03□□□□□ -1.28
ATPAF1-212ENST00000542495 DCAF11Q8TEB1 546 aa7.03□□□□□ -1.28
ATPAF1-212ENST00000542495 MYBBP1AQ9BQG0 1328 aaKnown RBP7.03□□□□□ -1.28
ATPAF1-212ENST00000542495 MYO5CQ9NQX4 1742 aa7.03□□□□□ -1.28
ATPAF1-212ENST00000542495 PRDM15P57071 1507 aaPredicted RBP7.03□□□□□ -1.28
ATPAF1-212ENST00000542495 CCDC144AA2RUR9 1427 aa7.02□□□□□ -1.28
ATPAF1-212ENST00000542495 A2MP01023 1474 aa7.02□□□□□ -1.29
ATPAF1-212ENST00000542495 ARHGAP5Q13017 1502 aa7.02□□□□□ -1.29
ATPAF1-212ENST00000542495 DUOX2Q9NRD8 1548 aa7.02□□□□□ -1.29
ATPAF1-212ENST00000542495 PARD3Q8TEW0 1356 aa7.02□□□□□ -1.29
ATPAF1-212ENST00000542495 EIF2AK4Q9P2K8 1649 aaKnown RBP7.02□□□□□ -1.29
ATPAF1-212ENST00000542495 INSRP06213 1382 aa7.01□□□□□ -1.29
ATPAF1-212ENST00000542495 ERBINQ96RT1 1412 aa7.01□□□□□ -1.29
ATPAF1-212ENST00000542495 B4GALNT3Q6L9W6 998 aa7.01□□□□□ -1.29
ATPAF1-212ENST00000542495 OTUD5Q96G74 571 aa7.01□□□□□ -1.29
ATPAF1-212ENST00000542495 COL17A1Q9UMD9 1497 aaPredicted RBP7.01□□□□□ -1.29
ATPAF1-212ENST00000542495 TSPOAP1O95153 1857 aa7.01□□□□□ -1.29
ATPAF1-212ENST00000542495 ZMYM4Q5VZL5 1548 aa7.01□□□□□ -1.29
ATPAF1-212ENST00000542495 TULP1O00294 542 aaPredicted RBP7□□□□□ -1.29
ATPAF1-212ENST00000542495 PER1O15534 1290 aaPredicted RBP7□□□□□ -1.29
ATPAF1-212ENST00000542495 GTPBP6O43824 516 aaPredicted RBP7□□□□□ -1.29
ATPAF1-212ENST00000542495 POTEGQ6S5H5 508 aa7□□□□□ -1.29
ATPAF1-212ENST00000542495 SPDYE1Q8NFV5 336 aaPredicted RBP7□□□□□ -1.29
ATPAF1-212ENST00000542495 TMC1Q8TDI8 760 aa7□□□□□ -1.29
ATPAF1-212ENST00000542495 WASHC2CQ9Y4E1 1318 aa7□□□□□ -1.29
ATPAF1-212ENST00000542495 RNF17Q9BXT8 1623 aaKnown RBP7□□□□□ -1.29
ATPAF1-212ENST00000542495 PLCH2O75038 1416 aa7□□□□□ -1.29
ATPAF1-212ENST00000542495 UHRF1BP1LA0JNW5 1464 aa7□□□□□ -1.29
ATPAF1-212ENST00000542495 POLR3GLQ9BT43 218 aa7□□□□□ -1.29
ATPAF1-212ENST00000542495 TESK2Q96S53 571 aa6.99□□□□□ -1.29
ATPAF1-212ENST00000542495 ASXL2Q76L83 1435 aa6.99□□□□□ -1.29
ATPAF1-212ENST00000542495 ABCC1P33527 1531 aa6.98□□□□□ -1.29
ATPAF1-212ENST00000542495 GLI2P10070 1586 aa6.98□□□□□ -1.29
ATPAF1-212ENST00000542495 GSE1Q14687 1217 aa6.98□□□□□ -1.29
ATPAF1-212ENST00000542495 NBPF1Q3BBV0 1214 aa6.98□□□□□ -1.29
ATPAF1-212ENST00000542495 NLRP13Q86W25 1043 aa6.98□□□□□ -1.29
ATPAF1-212ENST00000542495 ARAP3Q8WWN8 1544 aa6.98□□□□□ -1.29
ATPAF1-212ENST00000542495 KDM4FA0A1W2PPD8 638 aa6.97□□□□□ -1.29
ATPAF1-212ENST00000542495 NUBP1P53384 320 aa6.97□□□□□ -1.29
ATPAF1-212ENST00000542495 ZCCHC11Q5TAX3 1644 aaKnown RBP6.97□□□□□ -1.29
ATPAF1-212ENST00000542495 RIOK3O14730 519 aaKnown RBP6.97□□□□□ -1.29
ATPAF1-212ENST00000542495 PDE3BQ13370 1112 aa6.97□□□□□ -1.29
ATPAF1-212ENST00000542495 DISP3Q9P2K9 1392 aa6.97□□□□□ -1.29
ATPAF1-212ENST00000542495 RTEL1-TNFRSF6BF6WH68 1400 aa6.97□□□□□ -1.29
ATPAF1-212ENST00000542495 BLMP54132 1417 aaPredicted RBP6.97□□□□□ -1.29
ATPAF1-212ENST00000542495 POTEB2H3BUK9 544 aa6.96□□□□□ -1.3
ATPAF1-212ENST00000542495 DEPDC5O75140 1603 aa6.96□□□□□ -1.3
ATPAF1-212ENST00000542495 IQGAP1P46940 1657 aa6.96□□□□□ -1.3
ATPAF1-212ENST00000542495 MADDQ8WXG6 1647 aa6.96□□□□□ -1.3
ATPAF1-212ENST00000542495 TRPM2O94759 1503 aa6.95□□□□□ -1.3
ATPAF1-212ENST00000542495 PTPRTO14522 1441 aa6.95□□□□□ -1.3
ATPAF1-212ENST00000542495 TRAPPC8Q9Y2L5 1435 aa6.95□□□□□ -1.3
ATPAF1-212ENST00000542495 CNGB1Q14028 1251 aaPredicted RBP6.95□□□□□ -1.3
ATPAF1-212ENST00000542495 NEURL4Q96JN8 1562 aa6.95□□□□□ -1.3
ATPAF1-212ENST00000542495 RGL3Q3MIN7 710 aa6.95□□□□□ -1.3
ATPAF1-212ENST00000542495 EFCAB2Q5VUJ9 269 aa6.95□□□□□ -1.3
ATPAF1-212ENST00000542495 SPHKAPQ2M3C7 1700 aa6.94□□□□□ -1.3
ATPAF1-212ENST00000542495 PPRC1Q5VV67 1664 aaKnown RBP6.94□□□□□ -1.3
ATPAF1-212ENST00000542495 VWDEQ8N2E2 1590 aa6.94□□□□□ -1.3
ATPAF1-212ENST00000542495 ZFYVE16Q7Z3T8 1539 aa6.94□□□□□ -1.3
ATPAF1-212ENST00000542495 WDR7Q9Y4E6 1490 aa6.94□□□□□ -1.3
ATPAF1-212ENST00000542495 SCAPERQ9BY12 1400 aa6.94□□□□□ -1.3
ATPAF1-212ENST00000542495 CEP152O94986 1710 aa6.94□□□□□ -1.3
ATPAF1-212ENST00000542495 CD44P16070 742 aaKnown RBP6.94□□□□□ -1.3
ATPAF1-212ENST00000542495 RRP1P56182 461 aaKnown RBP6.94□□□□□ -1.3
ATPAF1-212ENST00000542495 CCDC136Q96JN2 1154 aa6.94□□□□□ -1.3
ATPAF1-212ENST00000542495 STAC3Q96MF2 364 aa6.94□□□□□ -1.3
ATPAF1-212ENST00000542495 MAP3K4Q9Y6R4 1608 aa6.93□□□□□ -1.3
ATPAF1-212ENST00000542495 TMF1P82094 1093 aa6.93□□□□□ -1.3
ATPAF1-212ENST00000542495 TET3O43151 1660 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms