RNA–Protein interactions for RNA: ENST00000541938.1

SAMD1-203, Transcript of sterile alpha motif domain containing 1, humanhuman

TSL 3

Gene SAMD1, Length 143 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-203ENST00000541938 SENP3Q9H4L4 574 aaPredicted RBP28.96■■■□□ 2.23
SAMD1-203ENST00000541938 UBAP1LF5GYI3 381 aa28.95■■■□□ 2.22
SAMD1-203ENST00000541938 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.95■■■□□ 2.22
SAMD1-203ENST00000541938 NUTM2DQ5VT03 806 aaPredicted RBP28.94■■■□□ 2.22
SAMD1-203ENST00000541938 SPHKAPQ2M3C7 1700 aa28.94■■■□□ 2.22
SAMD1-203ENST00000541938 PLEKHG1Q9ULL1 1385 aa28.9■■■□□ 2.22
SAMD1-203ENST00000541938 STRCP1A6NGW2 1772 aa28.9■■■□□ 2.22
SAMD1-203ENST00000541938 SETD5Q9C0A6 1442 aa28.89■■■□□ 2.22
SAMD1-203ENST00000541938 ZNF326Q5BKZ1 582 aaKnown RBP28.87■■■□□ 2.21
SAMD1-203ENST00000541938 MPHOSPH9Q99550 1183 aa28.87■■■□□ 2.21
SAMD1-203ENST00000541938 TRPM2O94759 1503 aa28.87■■■□□ 2.21
SAMD1-203ENST00000541938 LRRC7Q96NW7 1537 aa28.87■■■□□ 2.21
SAMD1-203ENST00000541938 KCNA6P17658 529 aa28.86■■■□□ 2.21
SAMD1-203ENST00000541938 FOXD1Q16676 465 aa28.86■■■□□ 2.21
SAMD1-203ENST00000541938 CLTCL1P53675 1640 aa28.83■■■□□ 2.21
SAMD1-203ENST00000541938 TOM1O60784 492 aa28.83■■■□□ 2.21
SAMD1-203ENST00000541938 TBX22Q9Y458 520 aa28.82■■■□□ 2.2
SAMD1-203ENST00000541938 ACIN1Q9UKV3 1341 aaKnown RBP28.82■■■□□ 2.2
SAMD1-203ENST00000541938 RAB3GAP2Q9H2M9 1393 aa28.78■■■□□ 2.2
SAMD1-203ENST00000541938 PROSER2Q86WR7 435 aaPredicted RBP28.77■■■□□ 2.2
SAMD1-203ENST00000541938 ADAMTS13Q76LX8 1427 aa28.77■■■□□ 2.2
SAMD1-203ENST00000541938 PIP4K2BP78356 416 aa28.76■■■□□ 2.19
SAMD1-203ENST00000541938 SCAF1Q9H7N4 1312 aaKnown RBP28.75■■■□□ 2.19
SAMD1-203ENST00000541938 RBM33Q96EV2 1170 aaKnown RBP28.73■■■□□ 2.19
SAMD1-203ENST00000541938 TMEM94Q12767 1356 aa28.73■■■□□ 2.19
SAMD1-203ENST00000541938 KIF1BO60333 1816 aa28.72■■■□□ 2.19
SAMD1-203ENST00000541938 NWD1Q149M9 1564 aa28.69■■■□□ 2.18
SAMD1-203ENST00000541938 NEXMIFQ5QGS0 1516 aa28.69■■■□□ 2.18
SAMD1-203ENST00000541938 CCDC144AA2RUR9 1427 aa28.68■■■□□ 2.18
SAMD1-203ENST00000541938 NKTRP30414 1462 aaKnown RBP28.67■■■□□ 2.18
SAMD1-203ENST00000541938 PIK3R4Q99570 1358 aa28.67■■■□□ 2.18
SAMD1-203ENST00000541938 ALKQ9UM73 1620 aa28.67■■■□□ 2.18
SAMD1-203ENST00000541938 RPGRIP1LQ68CZ1 1315 aa28.67■■■□□ 2.18
SAMD1-203ENST00000541938 DIP2AQ14689 1571 aa28.67■■■□□ 2.18
SAMD1-203ENST00000541938 CHD2O14647 1828 aaKnown RBP28.66■■■□□ 2.18
SAMD1-203ENST00000541938 XIRP1Q702N8 1843 aaKnown RBP28.65■■■□□ 2.18
SAMD1-203ENST00000541938 VGFO15240 615 aaPredicted RBP28.65■■■□□ 2.18
SAMD1-203ENST00000541938 HRCP23327 699 aa28.65■■■□□ 2.18
SAMD1-203ENST00000541938 AMOTL2Q9Y2J4 779 aa28.63■■■□□ 2.17
SAMD1-203ENST00000541938 RGL3Q3MIN7 710 aa28.62■■■□□ 2.17
SAMD1-203ENST00000541938 SETBP1Q9Y6X0 1596 aa28.62■■■□□ 2.17
SAMD1-203ENST00000541938 HSPA1LP34931 641 aa28.61■■■□□ 2.17
SAMD1-203ENST00000541938 NRXN3Q9Y4C0 1643 aa28.61■■■□□ 2.17
SAMD1-203ENST00000541938 DISP3Q9P2K9 1392 aa28.61■■■□□ 2.17
SAMD1-203ENST00000541938 PTPRUQ92729 1446 aa28.6■■■□□ 2.17
SAMD1-203ENST00000541938 METP08581 1390 aa28.58■■■□□ 2.17
SAMD1-203ENST00000541938 SPATA31E1Q6ZUB1 1445 aa28.56■■■□□ 2.16
SAMD1-203ENST00000541938 MSH6P52701 1360 aa28.55■■■□□ 2.16
SAMD1-203ENST00000541938 C14orf37Q86TY3 774 aa28.53■■■□□ 2.16
SAMD1-203ENST00000541938 NCOA3Q9Y6Q9 1424 aa28.52■■■□□ 2.16
SAMD1-203ENST00000541938 ADGRF5Q8IZF2 1346 aa28.51■■■□□ 2.15
SAMD1-203ENST00000541938 PPLO60437 1756 aa28.5■■■□□ 2.15
SAMD1-203ENST00000541938 ANKRD30BQ9BXX2 1392 aa28.49■■■□□ 2.15
SAMD1-203ENST00000541938 FAM135BQ49AJ0 1406 aa28.46■■■□□ 2.15
SAMD1-203ENST00000541938 ILDR2Q71H61 639 aa28.46■■■□□ 2.15
SAMD1-203ENST00000541938 C19orf44Q9H6X5 657 aa28.46■■■□□ 2.15
SAMD1-203ENST00000541938 SLAIN2Q9P270 581 aa28.46■■■□□ 2.15
SAMD1-203ENST00000541938 XRN1Q8IZH2 1706 aaKnown RBP28.45■■■□□ 2.14
SAMD1-203ENST00000541938 ATF3P18847 181 aa28.41■■■□□ 2.14
SAMD1-203ENST00000541938 CADPS2Q86UW7 1296 aa28.41■■■□□ 2.14
SAMD1-203ENST00000541938 SETD1AO15047 1707 aaKnown RBP28.39■■■□□ 2.14
SAMD1-203ENST00000541938 IFT172Q9UG01 1749 aa28.38■■■□□ 2.13
SAMD1-203ENST00000541938 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.36■■■□□ 2.13
SAMD1-203ENST00000541938 ROBO2Q9HCK4 1378 aa28.35■■■□□ 2.13
SAMD1-203ENST00000541938 ROBO1Q9Y6N7 1651 aa28.34■■■□□ 2.13
SAMD1-203ENST00000541938 PIK3C2GO75747 1445 aa28.34■■■□□ 2.13
SAMD1-203ENST00000541938 TMEM132EQ6IEE7 984 aa28.33■■■□□ 2.13
SAMD1-203ENST00000541938 STK26Q9P289 416 aa28.32■■■□□ 2.12
SAMD1-203ENST00000541938 PTCH1Q13635 1447 aa28.32■■■□□ 2.12
SAMD1-203ENST00000541938 C14orf93Q9H972 538 aaKnown RBP28.31■■■□□ 2.12
SAMD1-203ENST00000541938 ADGRL3Q9HAR2 1447 aa28.3■■■□□ 2.12
SAMD1-203ENST00000541938 MYOM2P54296 1465 aa28.29■■■□□ 2.12
SAMD1-203ENST00000541938 DCCP43146 1447 aa28.29■■■□□ 2.12
SAMD1-203ENST00000541938 CFAP70Q5T0N1 1121 aa28.29■■■□□ 2.12
SAMD1-203ENST00000541938 KDM2AQ9Y2K7 1162 aa28.29■■■□□ 2.12
SAMD1-203ENST00000541938 PRAG1Q86YV5 1406 aa28.28■■■□□ 2.12
SAMD1-203ENST00000541938 DCAF11Q8TEB1 546 aa28.28■■■□□ 2.12
SAMD1-203ENST00000541938 NRXN1Q9ULB1 1477 aa28.27■■■□□ 2.12
SAMD1-203ENST00000541938 LRPPRCP42704 1394 aaKnown RBP28.27■■■□□ 2.12
SAMD1-203ENST00000541938 MED1Q15648 1581 aaPredicted RBP28.25■■■□□ 2.11
SAMD1-203ENST00000541938 ASXL1Q8IXJ9 1541 aa28.23■■■□□ 2.11
SAMD1-203ENST00000541938 BRINP3Q76B58 766 aa28.23■■■□□ 2.11
SAMD1-203ENST00000541938 MST1RQ04912 1400 aa28.23■■■□□ 2.11
SAMD1-203ENST00000541938 ABCC11Q96J66 1382 aa28.23■■■□□ 2.11
SAMD1-203ENST00000541938 WAPLQ7Z5K2 1190 aa28.22■■■□□ 2.11
SAMD1-203ENST00000541938 DHX57Q6P158 1386 aaKnown RBP28.22■■■□□ 2.11
SAMD1-203ENST00000541938 YTHDC2Q9H6S0 1430 aaKnown RBP28.21■■■□□ 2.11
SAMD1-203ENST00000541938 SOCS7O14512 581 aa28.21■■■□□ 2.11
SAMD1-203ENST00000541938 NALCNQ8IZF0 1738 aa28.21■■■□□ 2.11
SAMD1-203ENST00000541938 STAC3Q96MF2 364 aa28.2■■■□□ 2.1
SAMD1-203ENST00000541938 TECPR2O15040 1411 aa28.19■■■□□ 2.1
SAMD1-203ENST00000541938 TRIM26Q12899 539 aaPredicted RBP28.19■■■□□ 2.1
SAMD1-203ENST00000541938 PLEKHH1Q9ULM0 1364 aa28.16■■■□□ 2.1
SAMD1-203ENST00000541938 PHLPP1O60346 1717 aa28.16■■■□□ 2.1
SAMD1-203ENST00000541938 SIRT1Q96EB6 747 aa28.16■■■□□ 2.1
SAMD1-203ENST00000541938 LAMC1P11047 1609 aa28.13■■■□□ 2.09
SAMD1-203ENST00000541938 C1orf167Q5SNV9 1468 aa28.13■■■□□ 2.09
SAMD1-203ENST00000541938 KNDC1Q76NI1 1749 aa28.11■■■□□ 2.09
SAMD1-203ENST00000541938 JCADQ9P266 1359 aa28.11■■■□□ 2.09
SAMD1-203ENST00000541938 AHDC1Q5TGY3 1603 aaPredicted RBP28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms