RNA–Protein interactions for RNA: ENST00000541916.5

FNDC3A-206, Transcript of fibronectin type III domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3A, Length 6,328 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-206ENST00000541916 CCDC136Q96JN2 1154 aa11.04□□□□□ -0.64
FNDC3A-206ENST00000541916 NCKAP5LQ9HCH0 1330 aa11.04□□□□□ -0.64
FNDC3A-206ENST00000541916 ZC3H6P61129 1189 aaKnown RBP11.03□□□□□ -0.64
FNDC3A-206ENST00000541916 FAM135AQ9P2D6 1515 aa11.03□□□□□ -0.64
FNDC3A-206ENST00000541916 EIF2S2P20042 333 aaKnown RBP11.02□□□□□ -0.64
FNDC3A-206ENST00000541916 AMOTL2Q9Y2J4 779 aa11.02□□□□□ -0.64
FNDC3A-206ENST00000541916 CDK13Q14004 1512 aaKnown RBP11.02□□□□□ -0.65
FNDC3A-206ENST00000541916 SLC4A10Q6U841 1118 aa11.02□□□□□ -0.65
FNDC3A-206ENST00000541916 KIF14Q15058 1648 aa11.02□□□□□ -0.65
FNDC3A-206ENST00000541916 CFAP70Q5T0N1 1121 aa11.01□□□□□ -0.65
FNDC3A-206ENST00000541916 KIF21AQ7Z4S6 1674 aa11.01□□□□□ -0.65
FNDC3A-206ENST00000541916 NOL10Q9BSC4 688 aaKnown RBP11.01□□□□□ -0.65
FNDC3A-206ENST00000541916 ST20-MTHFSA0A0A6YYL1 179 aa11.01□□□□□ -0.65
FNDC3A-206ENST00000541916 IPO8O15397 1037 aaKnown RBP11.01□□□□□ -0.65
FNDC3A-206ENST00000541916 NEXNQ0ZGT2 675 aa11.01□□□□□ -0.65
FNDC3A-206ENST00000541916 BCL11BQ9C0K0 894 aaPredicted RBP11.01□□□□□ -0.65
FNDC3A-206ENST00000541916 EHBP1L1Q8N3D4 1523 aa11.01□□□□□ -0.65
FNDC3A-206ENST00000541916 RPGRIP1LQ68CZ1 1315 aa11□□□□□ -0.65
FNDC3A-206ENST00000541916 UHRF1BP1Q6BDS2 1440 aa11□□□□□ -0.65
FNDC3A-206ENST00000541916 WDR7Q9Y4E6 1490 aa11□□□□□ -0.65
FNDC3A-206ENST00000541916 VPS37DQ86XT2 251 aa11□□□□□ -0.65
FNDC3A-206ENST00000541916 CDK19Q9BWU1 502 aa11□□□□□ -0.65
FNDC3A-206ENST00000541916 CTDP1Q9Y5B0 961 aaPredicted RBP11□□□□□ -0.65
FNDC3A-206ENST00000541916 PLEKHO1Q53GL0 409 aaPredicted RBP10.99□□□□□ -0.65
FNDC3A-206ENST00000541916 RTEL1-TNFRSF6BF6WH68 1400 aa10.99□□□□□ -0.65
FNDC3A-206ENST00000541916 CLSTN1O94985 981 aa10.99□□□□□ -0.65
FNDC3A-206ENST00000541916 WDR62O43379 1518 aa10.99□□□□□ -0.65
FNDC3A-206ENST00000541916 APBB1O00213 710 aa10.99□□□□□ -0.65
FNDC3A-206ENST00000541916 FAM177BA6PVY3 158 aa10.99□□□□□ -0.65
FNDC3A-206ENST00000541916 DIAPH1O60610 1272 aaKnown RBP10.99□□□□□ -0.65
FNDC3A-206ENST00000541916 PEG3Q9GZU2 1588 aa10.99□□□□□ -0.65
FNDC3A-206ENST00000541916 LRRC9Q6ZRR7 1453 aa10.98□□□□□ -0.65
FNDC3A-206ENST00000541916 ERBINQ96RT1 1412 aa10.98□□□□□ -0.65
FNDC3A-206ENST00000541916 SPG7Q9UQ90 795 aa10.98□□□□□ -0.65
FNDC3A-206ENST00000541916 FOXO3O43524 673 aa10.98□□□□□ -0.65
FNDC3A-206ENST00000541916 ZNF692Q9BU19 519 aaPredicted RBP10.98□□□□□ -0.65
FNDC3A-206ENST00000541916 PANK3Q9H999 370 aa10.98□□□□□ -0.65
FNDC3A-206ENST00000541916 RALBP1Q15311 655 aa10.98□□□□□ -0.65
FNDC3A-206ENST00000541916 NCBP3Q53F19 620 aaKnown RBP10.97□□□□□ -0.65
FNDC3A-206ENST00000541916 CABP4P57796 275 aa10.97□□□□□ -0.65
FNDC3A-206ENST00000541916 NBPF8Q3BBV2 869 aa10.97□□□□□ -0.65
FNDC3A-206ENST00000541916 NBPF14Q5TI25 921 aa10.97□□□□□ -0.65
FNDC3A-206ENST00000541916 CCDC141Q6ZP82 1450 aa10.97□□□□□ -0.65
FNDC3A-206ENST00000541916 GGNBP2Q9H3C7 697 aa10.96□□□□□ -0.65
FNDC3A-206ENST00000541916 DDX58O95786 925 aaKnown RBP10.96□□□□□ -0.65
FNDC3A-206ENST00000541916 EIF5BO60841 1220 aaKnown RBP10.96□□□□□ -0.66
FNDC3A-206ENST00000541916 KIF6Q6ZMV9 814 aa10.96□□□□□ -0.66
FNDC3A-206ENST00000541916 PHF8Q9UPP1 1060 aa10.96□□□□□ -0.66
FNDC3A-206ENST00000541916 EIF4G3O43432 1585 aaKnown RBP10.96□□□□□ -0.66
FNDC3A-206ENST00000541916 KRT28Q7Z3Y7 464 aa10.95□□□□□ -0.66
FNDC3A-206ENST00000541916 PAXIP1Q6ZW49 1069 aaPredicted RBP10.95□□□□□ -0.66
FNDC3A-206ENST00000541916 CCDC146Q8IYE0 955 aa10.95□□□□□ -0.66
FNDC3A-206ENST00000541916 GPATCH3Q96I76 525 aa10.94□□□□□ -0.66
FNDC3A-206ENST00000541916 KCNH5Q8NCM2 988 aa10.94□□□□□ -0.66
FNDC3A-206ENST00000541916 NECTIN2Q92692 538 aa10.94□□□□□ -0.66
FNDC3A-206ENST00000541916 DDRGK1Q96HY6 314 aa10.94□□□□□ -0.66
FNDC3A-206ENST00000541916 AMOTL1Q8IY63 956 aa10.93□□□□□ -0.66
FNDC3A-206ENST00000541916 RAD21O60216 631 aa10.93□□□□□ -0.66
FNDC3A-206ENST00000541916 CABP1Q9NZU7 370 aa10.93□□□□□ -0.66
FNDC3A-206ENST00000541916 PRXQ9BXM0 1461 aa10.93□□□□□ -0.66
FNDC3A-206ENST00000541916 HSP90B1P14625 803 aaKnown RBP10.93□□□□□ -0.66
FNDC3A-206ENST00000541916 EXOC5O00471 708 aa10.92□□□□□ -0.66
FNDC3A-206ENST00000541916 IDI1Q13907 227 aa10.91□□□□□ -0.66
FNDC3A-206ENST00000541916 ELL2O00472 640 aaPredicted RBP10.91□□□□□ -0.66
FNDC3A-206ENST00000541916 HMOX1P09601 288 aa10.91□□□□□ -0.66
FNDC3A-206ENST00000541916 TOMM22Q9NS69 142 aa10.91□□□□□ -0.66
FNDC3A-206ENST00000541916 HSP90AB1P08238 724 aaKnown RBP10.91□□□□□ -0.66
FNDC3A-206ENST00000541916 WAPLQ7Z5K2 1190 aa10.91□□□□□ -0.66
FNDC3A-206ENST00000541916 ITPRIPQ8IWB1 547 aa10.91□□□□□ -0.66
FNDC3A-206ENST00000541916 AIMP1Q12904 312 aaKnown RBP10.91□□□□□ -0.66
FNDC3A-206ENST00000541916 LRRC59Q96AG4 307 aaKnown RBP10.91□□□□□ -0.66
FNDC3A-206ENST00000541916 SMC4Q9NTJ3 1288 aa10.91□□□□□ -0.66
FNDC3A-206ENST00000541916 C9orf78Q9NZ63 289 aaPredicted RBP10.91□□□□□ -0.66
FNDC3A-206ENST00000541916 RRP7AQ9Y3A4 280 aaKnown RBP10.91□□□□□ -0.66
FNDC3A-206ENST00000541916 HFM1A2PYH4 1435 aa10.91□□□□□ -0.66
FNDC3A-206ENST00000541916 NUDT16Q96DE0 195 aaKnown RBP10.91□□□□□ -0.66
FNDC3A-206ENST00000541916 C16orf71Q8IYS4 520 aaPredicted RBP10.9□□□□□ -0.66
FNDC3A-206ENST00000541916 CCAR1Q8IX12 1150 aaKnown RBP10.9□□□□□ -0.66
FNDC3A-206ENST00000541916 RIC3Q7Z5B4 369 aa10.9□□□□□ -0.66
FNDC3A-206ENST00000541916 ANKRD30BQ9BXX2 1392 aa10.9□□□□□ -0.66
FNDC3A-206ENST00000541916 TSPYL4Q9UJ04 414 aa10.9□□□□□ -0.66
FNDC3A-206ENST00000541916 ZNF518AQ6AHZ1 1483 aa10.9□□□□□ -0.67
FNDC3A-206ENST00000541916 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.89□□□□□ -0.67
FNDC3A-206ENST00000541916 BICDL1Q6ZP65 573 aa10.89□□□□□ -0.67
FNDC3A-206ENST00000541916 ABCC2Q92887 1545 aa10.89□□□□□ -0.67
FNDC3A-206ENST00000541916 NPHP3Q7Z494 1330 aa10.89□□□□□ -0.67
FNDC3A-206ENST00000541916 POLD1P28340 1107 aa10.89□□□□□ -0.67
FNDC3A-206ENST00000541916 DHX29Q7Z478 1369 aaKnown RBP10.89□□□□□ -0.67
FNDC3A-206ENST00000541916 ZRSR1Q15695 479 aaKnown RBP10.89□□□□□ -0.67
FNDC3A-206ENST00000541916 ZPR1O75312 459 aa10.89□□□□□ -0.67
FNDC3A-206ENST00000541916 UHRF1BP1LA0JNW5 1464 aa10.89□□□□□ -0.67
FNDC3A-206ENST00000541916 ARAP1Q96P48 1450 aa10.89□□□□□ -0.67
FNDC3A-206ENST00000541916 HMMRO75330 724 aa10.88□□□□□ -0.67
FNDC3A-206ENST00000541916 ROCK1Q13464 1354 aa10.88□□□□□ -0.67
FNDC3A-206ENST00000541916 USP47Q96K76 1375 aa10.88□□□□□ -0.67
FNDC3A-206ENST00000541916 GAS2L2Q8NHY3 880 aa10.88□□□□□ -0.67
FNDC3A-206ENST00000541916 CNTLNQ9NXG0 1405 aa10.88□□□□□ -0.67
FNDC3A-206ENST00000541916 ZNF530Q6P9A1 599 aaPredicted RBP10.88□□□□□ -0.67
FNDC3A-206ENST00000541916 MTHFSP49914 203 aa10.88□□□□□ -0.67
FNDC3A-206ENST00000541916 VPS53Q5VIR6 699 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 632.2 ms