RNA–Protein interactions for RNA: ENST00000541549.2

EIF3A-203, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EIF3A, Length 4,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-203ENST00000541549 NUCB2P80303 420 aa14.78□□□□□ -0.04
EIF3A-203ENST00000541549 MYOM3Q5VTT5 1437 aa14.78□□□□□ -0.04
EIF3A-203ENST00000541549 BCAR3O75815 825 aa14.77□□□□□ -0.04
EIF3A-203ENST00000541549 SKAP1Q86WV1 359 aa14.77□□□□□ -0.05
EIF3A-203ENST00000541549 NPHP1O15259 732 aa14.76□□□□□ -0.05
EIF3A-203ENST00000541549 GORABQ5T7V8 394 aa14.76□□□□□ -0.05
EIF3A-203ENST00000541549 PDZRN3Q9UPQ7 1066 aa14.76□□□□□ -0.05
EIF3A-203ENST00000541549 CREBRFQ8IUR6 639 aa14.75□□□□□ -0.05
EIF3A-203ENST00000541549 ZNF771Q7L3S4 317 aaPredicted RBP14.75□□□□□ -0.05
EIF3A-203ENST00000541549 PDS5BQ9NTI5 1447 aa14.75□□□□□ -0.05
EIF3A-203ENST00000541549 AMPHP49418 695 aa14.75□□□□□ -0.05
EIF3A-203ENST00000541549 H3BQV1 296 aa14.74□□□□□ -0.05
EIF3A-203ENST00000541549 IFFO2Q5TF58 517 aa14.74□□□□□ -0.05
EIF3A-203ENST00000541549 TCP11L2Q8N4U5 519 aa14.74□□□□□ -0.05
EIF3A-203ENST00000541549 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.74□□□□□ -0.05
EIF3A-203ENST00000541549 CAVIN1Q6NZI2 390 aaKnown RBP14.74□□□□□ -0.05
EIF3A-203ENST00000541549 CCAR2Q8N163 923 aaKnown RBP14.74□□□□□ -0.05
EIF3A-203ENST00000541549 CHMP4AQ9BY43 222 aa14.74□□□□□ -0.05
EIF3A-203ENST00000541549 MINK1Q8N4C8 1332 aaPredicted RBP14.74□□□□□ -0.05
EIF3A-203ENST00000541549 DIAPH1O60610 1272 aaKnown RBP14.74□□□□□ -0.05
EIF3A-203ENST00000541549 HDAC5Q9UQL6 1122 aa14.74□□□□□ -0.05
EIF3A-203ENST00000541549 CCDC9Q9Y3X0 531 aaKnown RBP14.73□□□□□ -0.05
EIF3A-203ENST00000541549 EVC2Q86UK5 1308 aa14.73□□□□□ -0.05
EIF3A-203ENST00000541549 NBPF1Q3BBV0 1214 aa14.73□□□□□ -0.05
EIF3A-203ENST00000541549 FAM184AQ8NB25 1140 aa14.73□□□□□ -0.05
EIF3A-203ENST00000541549 API5Q9BZZ5 524 aaKnown RBP14.73□□□□□ -0.05
EIF3A-203ENST00000541549 WDR97A6NE52 1622 aa14.73□□□□□ -0.05
EIF3A-203ENST00000541549 BCL11BQ9C0K0 894 aaPredicted RBP14.72□□□□□ -0.05
EIF3A-203ENST00000541549 DIAPH3Q9NSV4 1193 aa14.72□□□□□ -0.05
EIF3A-203ENST00000541549 VPS37CA5D8V6 355 aaPredicted RBP14.72□□□□□ -0.05
EIF3A-203ENST00000541549 PPP2R1AP30153 589 aa14.72□□□□□ -0.05
EIF3A-203ENST00000541549 NECTIN2Q92692 538 aa14.72□□□□□ -0.05
EIF3A-203ENST00000541549 KIF3AQ9Y496 699 aa14.72□□□□□ -0.05
EIF3A-203ENST00000541549 SMARCA4P51532 1647 aa14.72□□□□□ -0.05
EIF3A-203ENST00000541549 INTS3Q68E01 1043 aaKnown RBP14.72□□□□□ -0.05
EIF3A-203ENST00000541549 NGDNQ8NEJ9 315 aaKnown RBP14.72□□□□□ -0.05
EIF3A-203ENST00000541549 SMG6Q86US8 1419 aaKnown RBP14.71□□□□□ -0.05
EIF3A-203ENST00000541549 MTHFSP49914 203 aa14.71□□□□□ -0.06
EIF3A-203ENST00000541549 RBM10P98175 930 aaKnown RBP14.71□□□□□ -0.06
EIF3A-203ENST00000541549 GOLGA6L1Q8N7Z2 621 aa14.71□□□□□ -0.06
EIF3A-203ENST00000541549 ISY1Q9ULR0 285 aaKnown RBP14.71□□□□□ -0.06
EIF3A-203ENST00000541549 PRKCSHP14314 528 aaPredicted RBP14.7□□□□□ -0.06
EIF3A-203ENST00000541549 CCDC34Q96HJ3 373 aa14.7□□□□□ -0.06
EIF3A-203ENST00000541549 HMOX1P09601 288 aa14.69□□□□□ -0.06
EIF3A-203ENST00000541549 AAMPQ13685 434 aa14.69□□□□□ -0.06
EIF3A-203ENST00000541549 PDE3AQ14432 1141 aa14.69□□□□□ -0.06
EIF3A-203ENST00000541549 GGNBP2Q9H3C7 697 aa14.69□□□□□ -0.06
EIF3A-203ENST00000541549 BICD2Q8TD16 824 aa14.69□□□□□ -0.06
EIF3A-203ENST00000541549 ZKSCAN1P17029 563 aaPredicted RBP14.69□□□□□ -0.06
EIF3A-203ENST00000541549 CSB-PGBD3P0DP91 1061 aa14.68□□□□□ -0.06
EIF3A-203ENST00000541549 COG3Q96JB2 828 aa14.68□□□□□ -0.06
EIF3A-203ENST00000541549 PRPF40AO75400 957 aaKnown RBP14.68□□□□□ -0.06
EIF3A-203ENST00000541549 CDC45O75419 566 aa14.68□□□□□ -0.06
EIF3A-203ENST00000541549 VGFO15240 615 aaPredicted RBP14.67□□□□□ -0.06
EIF3A-203ENST00000541549 TOMM22Q9NS69 142 aa14.67□□□□□ -0.06
EIF3A-203ENST00000541549 MIA2Q96PC5 1412 aa14.67□□□□□ -0.06
EIF3A-203ENST00000541549 ANKRD50Q9ULJ7 1429 aa14.67□□□□□ -0.06
EIF3A-203ENST00000541549 C11orf95C9JLR9 678 aaPredicted RBP14.67□□□□□ -0.06
EIF3A-203ENST00000541549 TAF7LQ5H9L4 462 aa14.67□□□□□ -0.06
EIF3A-203ENST00000541549 MPNDQ8N594 471 aa14.67□□□□□ -0.06
EIF3A-203ENST00000541549 IFT57Q9NWB7 429 aa14.67□□□□□ -0.06
EIF3A-203ENST00000541549 SMC3Q9UQE7 1217 aa14.67□□□□□ -0.06
EIF3A-203ENST00000541549 FKBP5Q13451 457 aaPredicted RBP14.66□□□□□ -0.06
EIF3A-203ENST00000541549 PKNOX2Q96KN3 472 aa14.66□□□□□ -0.06
EIF3A-203ENST00000541549 NCOA2Q15596 1464 aa14.66□□□□□ -0.06
EIF3A-203ENST00000541549 EIF2S2P20042 333 aaKnown RBP14.66□□□□□ -0.06
EIF3A-203ENST00000541549 MCM4P33991 863 aa14.66□□□□□ -0.06
EIF3A-203ENST00000541549 EXOSC9Q06265 439 aaKnown RBP14.66□□□□□ -0.06
EIF3A-203ENST00000541549 ESPNB1AK53 854 aa14.66□□□□□ -0.06
EIF3A-203ENST00000541549 TPM3P06753 285 aa14.66□□□□□ -0.06
EIF3A-203ENST00000541549 RASSF8Q8NHQ8 419 aa14.66□□□□□ -0.06
EIF3A-203ENST00000541549 GRPEL1Q9HAV7 217 aa14.66□□□□□ -0.06
EIF3A-203ENST00000541549 NOC3LQ8WTT2 800 aaKnown RBP14.65□□□□□ -0.06
EIF3A-203ENST00000541549 NEK4P51957 841 aa14.65□□□□□ -0.06
EIF3A-203ENST00000541549 TSR2Q969E8 191 aaKnown RBP14.65□□□□□ -0.06
EIF3A-203ENST00000541549 RUFY2Q8WXA3 655 aa14.65□□□□□ -0.06
EIF3A-203ENST00000541549 C1orf115Q9H7X2 142 aa14.65□□□□□ -0.06
EIF3A-203ENST00000541549 HOMER1Q86YM7 354 aa14.64□□□□□ -0.07
EIF3A-203ENST00000541549 FBXW7Q969H0 707 aa14.64□□□□□ -0.07
EIF3A-203ENST00000541549 PES1O00541 588 aaKnown RBP14.64□□□□□ -0.07
EIF3A-203ENST00000541549 GNAI1P63096 354 aa14.63□□□□□ -0.07
EIF3A-203ENST00000541549 C20orf194Q5TEA3 1177 aa14.63□□□□□ -0.07
EIF3A-203ENST00000541549 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.63□□□□□ -0.07
EIF3A-203ENST00000541549 MAP7D2Q96T17 732 aa14.63□□□□□ -0.07
EIF3A-203ENST00000541549 CCDC39Q9UFE4 941 aa14.63□□□□□ -0.07
EIF3A-203ENST00000541549 TPM2P07951 284 aa14.63□□□□□ -0.07
EIF3A-203ENST00000541549 TMEM132EQ6IEE7 984 aa14.63□□□□□ -0.07
EIF3A-203ENST00000541549 CFAP70Q5T0N1 1121 aa14.62□□□□□ -0.07
EIF3A-203ENST00000541549 C9orf78Q9NZ63 289 aaPredicted RBP14.62□□□□□ -0.07
EIF3A-203ENST00000541549 CFTRP13569 1480 aa14.62□□□□□ -0.07
EIF3A-203ENST00000541549 CCDC173Q0VFZ6 552 aa14.62□□□□□ -0.07
EIF3A-203ENST00000541549 FGD5Q6ZNL6 1462 aa14.61□□□□□ -0.07
EIF3A-203ENST00000541549 CLSTN1O94985 981 aa14.61□□□□□ -0.07
EIF3A-203ENST00000541549 SASS6Q6UVJ0 657 aa14.61□□□□□ -0.07
EIF3A-203ENST00000541549 IFIT2P09913 472 aaKnown RBP14.61□□□□□ -0.07
EIF3A-203ENST00000541549 MBD3O95983 291 aa14.6□□□□□ -0.07
EIF3A-203ENST00000541549 TEFQ10587 303 aa14.6□□□□□ -0.07
EIF3A-203ENST00000541549 CASKIN1Q8WXD9 1431 aa14.6□□□□□ -0.07
EIF3A-203ENST00000541549 RAD54L2Q9Y4B4 1467 aa14.6□□□□□ -0.07
EIF3A-203ENST00000541549 CCDC27Q2M243 656 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms