RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 MYO5BQ9ULV0 1848 aa21.3■■□□□ 1
LTBR-209ENST00000541102 TMEM131LA2VDJ0 1609 aa21.29■■□□□ 1
LTBR-209ENST00000541102 STRCP1A6NGW2 1772 aa21.29■■□□□ 1
LTBR-209ENST00000541102 TOM1O60784 492 aa21.29■■□□□ 1
LTBR-209ENST00000541102 PIP4K2BP78356 416 aa21.29■■□□□ 1
LTBR-209ENST00000541102 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.28■■□□□ 1
LTBR-209ENST00000541102 ZFYVE9O95405 1425 aa21.28■■□□□ 1
LTBR-209ENST00000541102 SLC4A1APQ9BWU0 796 aaKnown RBP21.27■■□□□ 1
LTBR-209ENST00000541102 LRRC7Q96NW7 1537 aa21.27■■□□□ 1
LTBR-209ENST00000541102 KCNA6P17658 529 aa21.25■□□□□ 0.99
LTBR-209ENST00000541102 ZNF326Q5BKZ1 582 aaKnown RBP21.25■□□□□ 0.99
LTBR-209ENST00000541102 PLEKHG1Q9ULL1 1385 aa21.23■□□□□ 0.99
LTBR-209ENST00000541102 SPHKAPQ2M3C7 1700 aa21.22■□□□□ 0.99
LTBR-209ENST00000541102 PROSER2Q86WR7 435 aaPredicted RBP21.22■□□□□ 0.99
LTBR-209ENST00000541102 RBM33Q96EV2 1170 aaKnown RBP21.2■□□□□ 0.98
LTBR-209ENST00000541102 FOXD1Q16676 465 aa21.19■□□□□ 0.98
LTBR-209ENST00000541102 TBX22Q9Y458 520 aa21.18■□□□□ 0.98
LTBR-209ENST00000541102 TMEM94Q12767 1356 aa21.17■□□□□ 0.98
LTBR-209ENST00000541102 HSPA1LP34931 641 aa21.16■□□□□ 0.98
LTBR-209ENST00000541102 TRPM2O94759 1503 aa21.15■□□□□ 0.98
LTBR-209ENST00000541102 MPHOSPH9Q99550 1183 aa21.15■□□□□ 0.98
LTBR-209ENST00000541102 CLTCL1P53675 1640 aa21.15■□□□□ 0.98
LTBR-209ENST00000541102 TRIM26Q12899 539 aaPredicted RBP21.14■□□□□ 0.97
LTBR-209ENST00000541102 ADAMTS13Q76LX8 1427 aa21.13■□□□□ 0.97
LTBR-209ENST00000541102 SETD5Q9C0A6 1442 aa21.13■□□□□ 0.97
LTBR-209ENST00000541102 ALKQ9UM73 1620 aa21.11■□□□□ 0.97
LTBR-209ENST00000541102 XIRP1Q702N8 1843 aaKnown RBP21.11■□□□□ 0.97
LTBR-209ENST00000541102 RAB3GAP2Q9H2M9 1393 aa21.1■□□□□ 0.97
LTBR-209ENST00000541102 KIF1BO60333 1816 aa21.08■□□□□ 0.97
LTBR-209ENST00000541102 NKTRP30414 1462 aaKnown RBP21.08■□□□□ 0.97
LTBR-209ENST00000541102 NWD1Q149M9 1564 aa21.08■□□□□ 0.97
LTBR-209ENST00000541102 CHD2O14647 1828 aaKnown RBP21.08■□□□□ 0.96
LTBR-209ENST00000541102 DISP3Q9P2K9 1392 aa21.08■□□□□ 0.96
LTBR-209ENST00000541102 C14orf37Q86TY3 774 aa21.07■□□□□ 0.96
LTBR-209ENST00000541102 AMOTL2Q9Y2J4 779 aa21.07■□□□□ 0.96
LTBR-209ENST00000541102 ACIN1Q9UKV3 1341 aaKnown RBP21.05■□□□□ 0.96
LTBR-209ENST00000541102 PIK3R4Q99570 1358 aa21.05■□□□□ 0.96
LTBR-209ENST00000541102 DIP2AQ14689 1571 aa21.05■□□□□ 0.96
LTBR-209ENST00000541102 NEXMIFQ5QGS0 1516 aa21.04■□□□□ 0.96
LTBR-209ENST00000541102 VGFO15240 615 aaPredicted RBP21.04■□□□□ 0.96
LTBR-209ENST00000541102 MSH6P52701 1360 aa21.04■□□□□ 0.96
LTBR-209ENST00000541102 RGL3Q3MIN7 710 aa21.03■□□□□ 0.96
LTBR-209ENST00000541102 CCDC144AA2RUR9 1427 aa21.03■□□□□ 0.96
LTBR-209ENST00000541102 PTPRUQ92729 1446 aa21.03■□□□□ 0.96
LTBR-209ENST00000541102 RPGRIP1LQ68CZ1 1315 aa21.03■□□□□ 0.96
LTBR-209ENST00000541102 SETBP1Q9Y6X0 1596 aa21.01■□□□□ 0.95
LTBR-209ENST00000541102 NRXN3Q9Y4C0 1643 aa21■□□□□ 0.95
LTBR-209ENST00000541102 METP08581 1390 aa21■□□□□ 0.95
LTBR-209ENST00000541102 SLAIN2Q9P270 581 aa20.99■□□□□ 0.95
LTBR-209ENST00000541102 C19orf44Q9H6X5 657 aa20.97■□□□□ 0.95
LTBR-209ENST00000541102 FAM135BQ49AJ0 1406 aa20.96■□□□□ 0.95
LTBR-209ENST00000541102 PCGF6Q9BYE7 350 aa20.96■□□□□ 0.95
LTBR-209ENST00000541102 NCOA3Q9Y6Q9 1424 aa20.95■□□□□ 0.95
LTBR-209ENST00000541102 ATF3P18847 181 aa20.95■□□□□ 0.94
LTBR-209ENST00000541102 HRCP23327 699 aa20.93■□□□□ 0.94
LTBR-209ENST00000541102 ADGRF5Q8IZF2 1346 aa20.93■□□□□ 0.94
LTBR-209ENST00000541102 SPATA31E1Q6ZUB1 1445 aa20.93■□□□□ 0.94
LTBR-209ENST00000541102 CADPS2Q86UW7 1296 aa20.92■□□□□ 0.94
LTBR-209ENST00000541102 PPLO60437 1756 aa20.91■□□□□ 0.94
LTBR-209ENST00000541102 XRN1Q8IZH2 1706 aaKnown RBP20.9■□□□□ 0.94
LTBR-209ENST00000541102 ROBO1Q9Y6N7 1651 aa20.89■□□□□ 0.94
LTBR-209ENST00000541102 ILDR2Q71H61 639 aa20.89■□□□□ 0.93
LTBR-209ENST00000541102 ANKRD30BQ9BXX2 1392 aa20.88■□□□□ 0.93
LTBR-209ENST00000541102 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.88■□□□□ 0.93
LTBR-209ENST00000541102 STK26Q9P289 416 aa20.84■□□□□ 0.93
LTBR-209ENST00000541102 MED1Q15648 1581 aaPredicted RBP20.84■□□□□ 0.93
LTBR-209ENST00000541102 ROBO2Q9HCK4 1378 aa20.84■□□□□ 0.93
LTBR-209ENST00000541102 TMEM132EQ6IEE7 984 aa20.83■□□□□ 0.93
LTBR-209ENST00000541102 PHF23Q9BUL5 403 aaPredicted RBP20.83■□□□□ 0.93
LTBR-209ENST00000541102 SETD1AO15047 1707 aaKnown RBP20.82■□□□□ 0.92
LTBR-209ENST00000541102 ADGRL3Q9HAR2 1447 aa20.8■□□□□ 0.92
LTBR-209ENST00000541102 BRINP3Q76B58 766 aa20.8■□□□□ 0.92
LTBR-209ENST00000541102 DCCP43146 1447 aa20.79■□□□□ 0.92
LTBR-209ENST00000541102 IFT172Q9UG01 1749 aa20.79■□□□□ 0.92
LTBR-209ENST00000541102 PTCH1Q13635 1447 aa20.78■□□□□ 0.92
LTBR-209ENST00000541102 KDM2AQ9Y2K7 1162 aa20.78■□□□□ 0.92
LTBR-209ENST00000541102 CFAP70Q5T0N1 1121 aa20.77■□□□□ 0.92
LTBR-209ENST00000541102 C14orf93Q9H972 538 aaKnown RBP20.77■□□□□ 0.92
LTBR-209ENST00000541102 PHLPP1O60346 1717 aa20.77■□□□□ 0.92
LTBR-209ENST00000541102 PIK3C2GO75747 1445 aa20.77■□□□□ 0.91
LTBR-209ENST00000541102 WAPLQ7Z5K2 1190 aa20.76■□□□□ 0.91
LTBR-209ENST00000541102 MST1RQ04912 1400 aa20.76■□□□□ 0.91
LTBR-209ENST00000541102 LRPPRCP42704 1394 aaKnown RBP20.75■□□□□ 0.91
LTBR-209ENST00000541102 DHX57Q6P158 1386 aaKnown RBP20.75■□□□□ 0.91
LTBR-209ENST00000541102 DCAF11Q8TEB1 546 aa20.75■□□□□ 0.91
LTBR-209ENST00000541102 NALCNQ8IZF0 1738 aa20.74■□□□□ 0.91
LTBR-209ENST00000541102 JCADQ9P266 1359 aa20.73■□□□□ 0.91
LTBR-209ENST00000541102 PRAG1Q86YV5 1406 aa20.72■□□□□ 0.91
LTBR-209ENST00000541102 ABCC11Q96J66 1382 aa20.72■□□□□ 0.91
LTBR-209ENST00000541102 YTHDC2Q9H6S0 1430 aaKnown RBP20.71■□□□□ 0.91
LTBR-209ENST00000541102 MYOM2P54296 1465 aa20.71■□□□□ 0.91
LTBR-209ENST00000541102 DDX17Q92841 729 aaKnown RBP20.71■□□□□ 0.91
LTBR-209ENST00000541102 ASXL1Q8IXJ9 1541 aa20.71■□□□□ 0.91
LTBR-209ENST00000541102 NRXN1Q9ULB1 1477 aa20.7■□□□□ 0.9
LTBR-209ENST00000541102 ORAI2Q96SN7 254 aa20.7■□□□□ 0.9
LTBR-209ENST00000541102 COL16A1Q07092 1604 aaPredicted RBP20.69■□□□□ 0.9
LTBR-209ENST00000541102 PLEKHH1Q9ULM0 1364 aa20.69■□□□□ 0.9
LTBR-209ENST00000541102 C1orf167Q5SNV9 1468 aa20.69■□□□□ 0.9
LTBR-209ENST00000541102 AHDC1Q5TGY3 1603 aaPredicted RBP20.68■□□□□ 0.9
LTBR-209ENST00000541102 TECPR2O15040 1411 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms