RNA–Protein interactions for RNA: ENST00000540418.5

MDM1-210, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best)

Gene MDM1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-210ENST00000540418 KIF1BO60333 1816 aa21.8■■□□□ 1.08
MDM1-210ENST00000540418 MED14O60244 1454 aa21.8■■□□□ 1.08
MDM1-210ENST00000540418 MYO5BQ9ULV0 1848 aa21.8■■□□□ 1.08
MDM1-210ENST00000540418 RPGRIP1LQ68CZ1 1315 aa21.79■■□□□ 1.08
MDM1-210ENST00000540418 SPATA31E1Q6ZUB1 1445 aa21.79■■□□□ 1.08
MDM1-210ENST00000540418 RGL3Q3MIN7 710 aa21.78■■□□□ 1.08
MDM1-210ENST00000540418 NPHP4O75161 1426 aaPredicted RBP21.78■■□□□ 1.08
MDM1-210ENST00000540418 NEURL4Q96JN8 1562 aa21.78■■□□□ 1.08
MDM1-210ENST00000540418 POLR1AO95602 1720 aaPredicted RBP21.77■■□□□ 1.08
MDM1-210ENST00000540418 PPP1R15AO75807 674 aaPredicted RBP21.77■■□□□ 1.08
MDM1-210ENST00000540418 NUTM2DQ5VT03 806 aaPredicted RBP21.76■■□□□ 1.07
MDM1-210ENST00000540418 VGFO15240 615 aaPredicted RBP21.73■■□□□ 1.07
MDM1-210ENST00000540418 PLEKHG1Q9ULL1 1385 aa21.73■■□□□ 1.07
MDM1-210ENST00000540418 NEXMIFQ5QGS0 1516 aa21.72■■□□□ 1.07
MDM1-210ENST00000540418 BCANQ96GW7 911 aa21.72■■□□□ 1.07
MDM1-210ENST00000540418 IQGAP1P46940 1657 aa21.7■■□□□ 1.06
MDM1-210ENST00000540418 SIN3AQ96ST3 1273 aa21.7■■□□□ 1.06
MDM1-210ENST00000540418 SENP3Q9H4L4 574 aaPredicted RBP21.68■■□□□ 1.06
MDM1-210ENST00000540418 SLC26A8Q96RN1 970 aa21.67■■□□□ 1.06
MDM1-210ENST00000540418 NEUROD1Q13562 356 aa21.66■■□□□ 1.06
MDM1-210ENST00000540418 TBX22Q9Y458 520 aa21.65■■□□□ 1.06
MDM1-210ENST00000540418 PPLO60437 1756 aa21.64■■□□□ 1.05
MDM1-210ENST00000540418 ADGRF5Q8IZF2 1346 aa21.63■■□□□ 1.05
MDM1-210ENST00000540418 DCAF11Q8TEB1 546 aa21.63■■□□□ 1.05
MDM1-210ENST00000540418 STAC3Q96MF2 364 aa21.63■■□□□ 1.05
MDM1-210ENST00000540418 ADAMTS13Q76LX8 1427 aa21.62■■□□□ 1.05
MDM1-210ENST00000540418 ZNF335Q9H4Z2 1342 aaPredicted RBP21.62■■□□□ 1.05
MDM1-210ENST00000540418 SETBP1Q9Y6X0 1596 aa21.6■■□□□ 1.05
MDM1-210ENST00000540418 CLSPNQ9HAW4 1339 aa21.6■■□□□ 1.05
MDM1-210ENST00000540418 KDM2AQ9Y2K7 1162 aa21.6■■□□□ 1.05
MDM1-210ENST00000540418 IFT172Q9UG01 1749 aa21.59■■□□□ 1.05
MDM1-210ENST00000540418 CCER1Q8TC90 406 aaPredicted RBP21.59■■□□□ 1.05
MDM1-210ENST00000540418 MYOM2P54296 1465 aa21.58■■□□□ 1.05
MDM1-210ENST00000540418 DIP2AQ14689 1571 aa21.57■■□□□ 1.04
MDM1-210ENST00000540418 L3MBTL2Q969R5 705 aa21.57■■□□□ 1.04
MDM1-210ENST00000540418 NRXN3Q9Y4C0 1643 aa21.56■■□□□ 1.04
MDM1-210ENST00000540418 KCNA6P17658 529 aa21.56■■□□□ 1.04
MDM1-210ENST00000540418 NRXN1Q9ULB1 1477 aa21.55■■□□□ 1.04
MDM1-210ENST00000540418 PIK3C2GO75747 1445 aa21.55■■□□□ 1.04
MDM1-210ENST00000540418 PIK3R4Q99570 1358 aa21.55■■□□□ 1.04
MDM1-210ENST00000540418 LTBP4Q8N2S1 1624 aa21.53■■□□□ 1.04
MDM1-210ENST00000540418 ALKQ9UM73 1620 aa21.53■■□□□ 1.04
MDM1-210ENST00000540418 METP08581 1390 aa21.52■■□□□ 1.04
MDM1-210ENST00000540418 C14orf93Q9H972 538 aaKnown RBP21.52■■□□□ 1.04
MDM1-210ENST00000540418 TONSLQ96HA7 1378 aa21.51■■□□□ 1.03
MDM1-210ENST00000540418 CPS1P31327 1500 aa21.5■■□□□ 1.03
MDM1-210ENST00000540418 CFAP70Q5T0N1 1121 aa21.49■■□□□ 1.03
MDM1-210ENST00000540418 AMOTL2Q9Y2J4 779 aa21.49■■□□□ 1.03
MDM1-210ENST00000540418 CERKQ8TCT0 537 aa21.48■■□□□ 1.03
MDM1-210ENST00000540418 PTPRUQ92729 1446 aa21.48■■□□□ 1.03
MDM1-210ENST00000540418 STRCP1A6NGW2 1772 aa21.46■■□□□ 1.03
MDM1-210ENST00000540418 NWD1Q149M9 1564 aa21.46■■□□□ 1.03
MDM1-210ENST00000540418 CHD2O14647 1828 aaKnown RBP21.46■■□□□ 1.03
MDM1-210ENST00000540418 TMEM132EQ6IEE7 984 aa21.45■■□□□ 1.02
MDM1-210ENST00000540418 SETD1AO15047 1707 aaKnown RBP21.45■■□□□ 1.02
MDM1-210ENST00000540418 PRAG1Q86YV5 1406 aa21.45■■□□□ 1.02
MDM1-210ENST00000540418 PROSER2Q86WR7 435 aaPredicted RBP21.45■■□□□ 1.02
MDM1-210ENST00000540418 TIMELESSQ9UNS1 1208 aa21.44■■□□□ 1.02
MDM1-210ENST00000540418 NKTRP30414 1462 aaKnown RBP21.44■■□□□ 1.02
MDM1-210ENST00000540418 LRRC7Q96NW7 1537 aa21.43■■□□□ 1.02
MDM1-210ENST00000540418 LAMC1P11047 1609 aa21.42■■□□□ 1.02
MDM1-210ENST00000540418 STK26Q9P289 416 aa21.4■■□□□ 1.02
MDM1-210ENST00000540418 LRPPRCP42704 1394 aaKnown RBP21.4■■□□□ 1.02
MDM1-210ENST00000540418 ASXL1Q8IXJ9 1541 aa21.39■■□□□ 1.01
MDM1-210ENST00000540418 XRN1Q8IZH2 1706 aaKnown RBP21.39■■□□□ 1.01
MDM1-210ENST00000540418 TMEM94Q12767 1356 aa21.38■■□□□ 1.01
MDM1-210ENST00000540418 RBM33Q96EV2 1170 aaKnown RBP21.38■■□□□ 1.01
MDM1-210ENST00000540418 ABCC11Q96J66 1382 aa21.38■■□□□ 1.01
MDM1-210ENST00000540418 YTHDC2Q9H6S0 1430 aaKnown RBP21.38■■□□□ 1.01
MDM1-210ENST00000540418 IQSEC2Q5JU85 1478 aa21.38■■□□□ 1.01
MDM1-210ENST00000540418 NBPF8Q3BBV2 869 aa21.37■■□□□ 1.01
MDM1-210ENST00000540418 NBPF1Q3BBV0 1214 aa21.36■■□□□ 1.01
MDM1-210ENST00000540418 ADGRB1O14514 1584 aa21.36■■□□□ 1.01
MDM1-210ENST00000540418 NCOA3Q9Y6Q9 1424 aa21.35■■□□□ 1.01
MDM1-210ENST00000540418 ROBO2Q9HCK4 1378 aa21.35■■□□□ 1.01
MDM1-210ENST00000540418 PTCH1Q13635 1447 aa21.35■■□□□ 1.01
MDM1-210ENST00000540418 SIRT1Q96EB6 747 aa21.34■■□□□ 1.01
MDM1-210ENST00000540418 TECPR2O15040 1411 aa21.34■■□□□ 1.01
MDM1-210ENST00000540418 KIAA1210Q9ULL0 1709 aa21.34■■□□□ 1.01
MDM1-210ENST00000540418 C14orf37Q86TY3 774 aa21.31■■□□□ 1
MDM1-210ENST00000540418 TRAK1Q9UPV9 953 aa21.31■■□□□ 1
MDM1-210ENST00000540418 WAPLQ7Z5K2 1190 aa21.3■■□□□ 1
MDM1-210ENST00000540418 FAM135BQ49AJ0 1406 aa21.29■■□□□ 1
MDM1-210ENST00000540418 C19orf44Q9H6X5 657 aa21.29■■□□□ 1
MDM1-210ENST00000540418 ROCK2O75116 1388 aaKnown RBP21.29■■□□□ 1
MDM1-210ENST00000540418 XIRP1Q702N8 1843 aaKnown RBP21.28■■□□□ 1
MDM1-210ENST00000540418 MSH6P52701 1360 aa21.28■■□□□ 1
MDM1-210ENST00000540418 TRPM1Q7Z4N2 1603 aa21.28■■□□□ 1
MDM1-210ENST00000540418 KNDC1Q76NI1 1749 aa21.28■■□□□ 1
MDM1-210ENST00000540418 DLC1Q96QB1 1528 aa21.27■■□□□ 1
MDM1-210ENST00000540418 PRAM1Q96QH2 718 aa21.27■■□□□ 1
MDM1-210ENST00000540418 UBAP1LF5GYI3 381 aa21.26■□□□□ 0.99
MDM1-210ENST00000540418 TOM1O60784 492 aa21.26■□□□□ 0.99
MDM1-210ENST00000540418 POGKQ9P215 609 aa21.26■□□□□ 0.99
MDM1-210ENST00000540418 PLEKHH1Q9ULM0 1364 aa21.25■□□□□ 0.99
MDM1-210ENST00000540418 RALGAPBQ86X10 1494 aa21.24■□□□□ 0.99
MDM1-210ENST00000540418 GPRASP1Q5JY77 1395 aa21.24■□□□□ 0.99
MDM1-210ENST00000540418 ADGRL3Q9HAR2 1447 aa21.23■□□□□ 0.99
MDM1-210ENST00000540418 ATF3P18847 181 aa21.23■□□□□ 0.99
MDM1-210ENST00000540418 CADPS2Q86UW7 1296 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms