RNA–Protein interactions for RNA: ENST00000539463.1

DENR-204, Transcript of density regulated re-initiation and release factor, humanhuman

TSL 2

Gene DENR, Length 671 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENR-204ENST00000539463 LRRC7Q96NW7 1537 aa38.75■■■■□ 3.79
DENR-204ENST00000539463 PPP1R15AO75807 674 aaPredicted RBP38.74■■■■□ 3.79
DENR-204ENST00000539463 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.74■■■■□ 3.79
DENR-204ENST00000539463 BCANQ96GW7 911 aa38.74■■■■□ 3.79
DENR-204ENST00000539463 PLEKHG1Q9ULL1 1385 aa38.73■■■■□ 3.79
DENR-204ENST00000539463 SLC4A1APQ9BWU0 796 aaKnown RBP38.72■■■■□ 3.79
DENR-204ENST00000539463 SENP3Q9H4L4 574 aaPredicted RBP38.71■■■■□ 3.79
DENR-204ENST00000539463 NUTM2DQ5VT03 806 aaPredicted RBP38.69■■■■□ 3.78
DENR-204ENST00000539463 TOM1O60784 492 aa38.67■■■■□ 3.78
DENR-204ENST00000539463 KCNA6P17658 529 aa38.66■■■■□ 3.78
DENR-204ENST00000539463 TRPM2O94759 1503 aa38.66■■■■□ 3.78
DENR-204ENST00000539463 CLTCL1P53675 1640 aa38.62■■■■□ 3.77
DENR-204ENST00000539463 PIP4K2BP78356 416 aa38.59■■■■□ 3.77
DENR-204ENST00000539463 TBX22Q9Y458 520 aa38.59■■■■□ 3.77
DENR-204ENST00000539463 ZNF326Q5BKZ1 582 aaKnown RBP38.58■■■■□ 3.77
DENR-204ENST00000539463 SCAF1Q9H7N4 1312 aaKnown RBP38.56■■■■□ 3.76
DENR-204ENST00000539463 SETD5Q9C0A6 1442 aa38.55■■■■□ 3.76
DENR-204ENST00000539463 ALKQ9UM73 1620 aa38.55■■■■□ 3.76
DENR-204ENST00000539463 ADAMTS13Q76LX8 1427 aa38.55■■■■□ 3.76
DENR-204ENST00000539463 FOXD1Q16676 465 aa38.53■■■■□ 3.76
DENR-204ENST00000539463 MPHOSPH9Q99550 1183 aa38.53■■■■□ 3.76
DENR-204ENST00000539463 NWD1Q149M9 1564 aa38.53■■■■□ 3.76
DENR-204ENST00000539463 PROSER2Q86WR7 435 aaPredicted RBP38.52■■■■□ 3.76
DENR-204ENST00000539463 TMEM94Q12767 1356 aa38.51■■■■□ 3.76
DENR-204ENST00000539463 XIRP1Q702N8 1843 aaKnown RBP38.49■■■■□ 3.75
DENR-204ENST00000539463 NKTRP30414 1462 aaKnown RBP38.48■■■■□ 3.75
DENR-204ENST00000539463 ACIN1Q9UKV3 1341 aaKnown RBP38.48■■■■□ 3.75
DENR-204ENST00000539463 RBM33Q96EV2 1170 aaKnown RBP38.47■■■■□ 3.75
DENR-204ENST00000539463 DIP2AQ14689 1571 aa38.46■■■■□ 3.75
DENR-204ENST00000539463 CHD2O14647 1828 aaKnown RBP38.45■■■■□ 3.75
DENR-204ENST00000539463 KIF1BO60333 1816 aa38.45■■■■□ 3.75
DENR-204ENST00000539463 NEXMIFQ5QGS0 1516 aa38.43■■■■□ 3.74
DENR-204ENST00000539463 PIK3R4Q99570 1358 aa38.42■■■■□ 3.74
DENR-204ENST00000539463 RAB3GAP2Q9H2M9 1393 aa38.42■■■■□ 3.74
DENR-204ENST00000539463 HSPA1LP34931 641 aa38.41■■■■□ 3.74
DENR-204ENST00000539463 SETBP1Q9Y6X0 1596 aa38.4■■■■□ 3.74
DENR-204ENST00000539463 NRXN3Q9Y4C0 1643 aa38.37■■■■□ 3.73
DENR-204ENST00000539463 CCDC144AA2RUR9 1427 aa38.34■■■■□ 3.73
DENR-204ENST00000539463 RPGRIP1LQ68CZ1 1315 aa38.34■■■■□ 3.73
DENR-204ENST00000539463 PTPRUQ92729 1446 aa38.33■■■■□ 3.73
DENR-204ENST00000539463 VGFO15240 615 aaPredicted RBP38.32■■■■□ 3.72
DENR-204ENST00000539463 AMOTL2Q9Y2J4 779 aa38.32■■■■□ 3.72
DENR-204ENST00000539463 METP08581 1390 aa38.29■■■■□ 3.72
DENR-204ENST00000539463 MSH6P52701 1360 aa38.28■■■■□ 3.72
DENR-204ENST00000539463 NCOA3Q9Y6Q9 1424 aa38.26■■■■□ 3.72
DENR-204ENST00000539463 SPATA31E1Q6ZUB1 1445 aa38.23■■■■□ 3.71
DENR-204ENST00000539463 RGL3Q3MIN7 710 aa38.22■■■■□ 3.71
DENR-204ENST00000539463 FAM135BQ49AJ0 1406 aa38.21■■■■□ 3.71
DENR-204ENST00000539463 HRCP23327 699 aa38.21■■■■□ 3.71
DENR-204ENST00000539463 C14orf37Q86TY3 774 aa38.19■■■■□ 3.7
DENR-204ENST00000539463 DISP3Q9P2K9 1392 aa38.19■■■■□ 3.7
DENR-204ENST00000539463 PPLO60437 1756 aa38.18■■■■□ 3.7
DENR-204ENST00000539463 XRN1Q8IZH2 1706 aaKnown RBP38.18■■■■□ 3.7
DENR-204ENST00000539463 C19orf44Q9H6X5 657 aa38.16■■■■□ 3.7
DENR-204ENST00000539463 SLAIN2Q9P270 581 aa38.15■■■■□ 3.7
DENR-204ENST00000539463 ADGRF5Q8IZF2 1346 aa38.12■■■■□ 3.69
DENR-204ENST00000539463 ANKRD30BQ9BXX2 1392 aa38.09■■■■□ 3.69
DENR-204ENST00000539463 ROBO1Q9Y6N7 1651 aa38.07■■■■□ 3.69
DENR-204ENST00000539463 SETD1AO15047 1707 aaKnown RBP38.07■■■■□ 3.69
DENR-204ENST00000539463 ATF3P18847 181 aa38.07■■■■□ 3.68
DENR-204ENST00000539463 CADPS2Q86UW7 1296 aa38.07■■■■□ 3.68
DENR-204ENST00000539463 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.06■■■■□ 3.68
DENR-204ENST00000539463 IFT172Q9UG01 1749 aa38.02■■■■□ 3.68
DENR-204ENST00000539463 DCCP43146 1447 aa37.97■■■■□ 3.67
DENR-204ENST00000539463 ROBO2Q9HCK4 1378 aa37.97■■■■□ 3.67
DENR-204ENST00000539463 PTCH1Q13635 1447 aa37.96■■■■□ 3.67
DENR-204ENST00000539463 PIK3C2GO75747 1445 aa37.95■■■■□ 3.67
DENR-204ENST00000539463 PRAG1Q86YV5 1406 aa37.95■■■■□ 3.67
DENR-204ENST00000539463 ADGRL3Q9HAR2 1447 aa37.94■■■■□ 3.66
DENR-204ENST00000539463 MED1Q15648 1581 aaPredicted RBP37.93■■■■□ 3.66
DENR-204ENST00000539463 ILDR2Q71H61 639 aa37.89■■■■□ 3.66
DENR-204ENST00000539463 TMEM132EQ6IEE7 984 aa37.87■■■■□ 3.65
DENR-204ENST00000539463 MYOM2P54296 1465 aa37.86■■■■□ 3.65
DENR-204ENST00000539463 NRXN1Q9ULB1 1477 aa37.86■■■■□ 3.65
DENR-204ENST00000539463 MST1RQ04912 1400 aa37.86■■■■□ 3.65
DENR-204ENST00000539463 NALCNQ8IZF0 1738 aa37.85■■■■□ 3.65
DENR-204ENST00000539463 BRINP3Q76B58 766 aa37.85■■■■□ 3.65
DENR-204ENST00000539463 C14orf93Q9H972 538 aaKnown RBP37.85■■■■□ 3.65
DENR-204ENST00000539463 STK26Q9P289 416 aa37.84■■■■□ 3.65
DENR-204ENST00000539463 ASXL1Q8IXJ9 1541 aa37.82■■■■□ 3.65
DENR-204ENST00000539463 LRPPRCP42704 1394 aaKnown RBP37.82■■■■□ 3.65
DENR-204ENST00000539463 PHLPP1O60346 1717 aa37.82■■■■□ 3.65
DENR-204ENST00000539463 ABCC11Q96J66 1382 aa37.8■■■■□ 3.64
DENR-204ENST00000539463 CFAP70Q5T0N1 1121 aa37.79■■■■□ 3.64
DENR-204ENST00000539463 TECPR2O15040 1411 aa37.78■■■■□ 3.64
DENR-204ENST00000539463 AHDC1Q5TGY3 1603 aaPredicted RBP37.76■■■■□ 3.63
DENR-204ENST00000539463 YTHDC2Q9H6S0 1430 aaKnown RBP37.75■■■■□ 3.63
DENR-204ENST00000539463 COL16A1Q07092 1604 aaPredicted RBP37.75■■■■□ 3.63
DENR-204ENST00000539463 WAPLQ7Z5K2 1190 aa37.74■■■■□ 3.63
DENR-204ENST00000539463 DCAF11Q8TEB1 546 aa37.74■■■■□ 3.63
DENR-204ENST00000539463 KDM2AQ9Y2K7 1162 aa37.73■■■■□ 3.63
DENR-204ENST00000539463 JCADQ9P266 1359 aa37.72■■■■□ 3.63
DENR-204ENST00000539463 PHF23Q9BUL5 403 aaPredicted RBP37.72■■■■□ 3.63
DENR-204ENST00000539463 C1orf167Q5SNV9 1468 aa37.7■■■■□ 3.63
DENR-204ENST00000539463 LAMC1P11047 1609 aa37.69■■■■□ 3.62
DENR-204ENST00000539463 STAC3Q96MF2 364 aa37.69■■■■□ 3.62
DENR-204ENST00000539463 DHX57Q6P158 1386 aaKnown RBP37.68■■■■□ 3.62
DENR-204ENST00000539463 PLEKHH1Q9ULM0 1364 aa37.68■■■■□ 3.62
DENR-204ENST00000539463 KNDC1Q76NI1 1749 aa37.67■■■■□ 3.62
DENR-204ENST00000539463 SIRT1Q96EB6 747 aa37.67■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms