RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 RGL3Q3MIN7 710 aa12.5□□□□□ -0.41
DDB1-213ENST00000539332 SLC52A1Q9NWF4 448 aa12.5□□□□□ -0.41
DDB1-213ENST00000539332 ADGRB3O60242 1522 aa12.5□□□□□ -0.41
DDB1-213ENST00000539332 IDI1Q13907 227 aa12.48□□□□□ -0.41
DDB1-213ENST00000539332 PPLO60437 1756 aa12.48□□□□□ -0.41
DDB1-213ENST00000539332 CEBPAP49715 358 aaPredicted RBP12.48□□□□□ -0.41
DDB1-213ENST00000539332 TMEM131LA2VDJ0 1609 aa12.47□□□□□ -0.41
DDB1-213ENST00000539332 DCAF11Q8TEB1 546 aa12.47□□□□□ -0.41
DDB1-213ENST00000539332 TNRQ92752 1358 aa12.47□□□□□ -0.41
DDB1-213ENST00000539332 GPRASP1Q5JY77 1395 aa12.46□□□□□ -0.41
DDB1-213ENST00000539332 CHGAP10645 457 aaKnown RBP12.46□□□□□ -0.42
DDB1-213ENST00000539332 MYOM2P54296 1465 aa12.46□□□□□ -0.42
DDB1-213ENST00000539332 SETD1BQ9UPS6 1966 aaKnown RBP12.45□□□□□ -0.42
DDB1-213ENST00000539332 HSPA5P11021 654 aaKnown RBP12.45□□□□□ -0.42
DDB1-213ENST00000539332 EIF4G2P78344 907 aaKnown RBP eCLIP12.45□□□□□ -0.42
DDB1-213ENST00000539332 KDM2AQ9Y2K7 1162 aa12.45□□□□□ -0.42
DDB1-213ENST00000539332 IQGAP1P46940 1657 aa12.44□□□□□ -0.42
DDB1-213ENST00000539332 STAC3Q96MF2 364 aa12.44□□□□□ -0.42
DDB1-213ENST00000539332 TAOK2Q9UL54 1235 aa12.43□□□□□ -0.42
DDB1-213ENST00000539332 KDM5AP29375 1690 aaKnown RBP12.43□□□□□ -0.42
DDB1-213ENST00000539332 ZNF326Q5BKZ1 582 aaKnown RBP12.43□□□□□ -0.42
DDB1-213ENST00000539332 NLRP1Q9C000 1473 aa12.42□□□□□ -0.42
DDB1-213ENST00000539332 NRXN1Q9ULB1 1477 aa12.42□□□□□ -0.42
DDB1-213ENST00000539332 UBR1Q8IWV7 1749 aa12.42□□□□□ -0.42
DDB1-213ENST00000539332 USP47Q96K76 1375 aa12.42□□□□□ -0.42
DDB1-213ENST00000539332 A2ML1A8K2U0 1454 aa12.42□□□□□ -0.42
DDB1-213ENST00000539332 MYO3AQ8NEV4 1616 aa12.42□□□□□ -0.42
DDB1-213ENST00000539332 NEXMIFQ5QGS0 1516 aa12.41□□□□□ -0.42
DDB1-213ENST00000539332 PTPRMP28827 1452 aa12.41□□□□□ -0.42
DDB1-213ENST00000539332 RPGRIP1LQ68CZ1 1315 aa12.41□□□□□ -0.42
DDB1-213ENST00000539332 STAG3Q9UJ98 1225 aa12.41□□□□□ -0.42
DDB1-213ENST00000539332 HIRIP3Q9BW71 556 aaPredicted RBP12.4□□□□□ -0.42
DDB1-213ENST00000539332 ROCK2O75116 1388 aaKnown RBP12.38□□□□□ -0.43
DDB1-213ENST00000539332 CCDC7Q96M83 1385 aa12.38□□□□□ -0.43
DDB1-213ENST00000539332 WASHC2AQ641Q2 1341 aa12.37□□□□□ -0.43
DDB1-213ENST00000539332 ADGRF5Q8IZF2 1346 aa12.37□□□□□ -0.43
DDB1-213ENST00000539332 MIER1Q8N108 512 aa12.37□□□□□ -0.43
DDB1-213ENST00000539332 CEP170BQ9Y4F5 1589 aaPredicted RBP12.37□□□□□ -0.43
DDB1-213ENST00000539332 SETBP1Q9Y6X0 1596 aa12.37□□□□□ -0.43
DDB1-213ENST00000539332 ZNF142P52746 1687 aaPredicted RBP12.37□□□□□ -0.43
DDB1-213ENST00000539332 ZFYVE9O95405 1425 aa12.37□□□□□ -0.43
DDB1-213ENST00000539332 KDM4FA0A1W2PPD8 638 aa12.35□□□□□ -0.43
DDB1-213ENST00000539332 VGFO15240 615 aaPredicted RBP12.35□□□□□ -0.43
DDB1-213ENST00000539332 NUTM2DQ5VT03 806 aaPredicted RBP12.35□□□□□ -0.43
DDB1-213ENST00000539332 PIK3C2GO75747 1445 aa12.35□□□□□ -0.43
DDB1-213ENST00000539332 CARD11Q9BXL7 1154 aa12.35□□□□□ -0.43
DDB1-213ENST00000539332 RIMS2Q9UQ26 1411 aa12.35□□□□□ -0.43
DDB1-213ENST00000539332 DDX10Q13206 875 aaKnown RBP12.34□□□□□ -0.43
DDB1-213ENST00000539332 ERICH6Q7L0X2 663 aa12.34□□□□□ -0.43
DDB1-213ENST00000539332 TMEM2Q9UHN6 1383 aa12.34□□□□□ -0.43
DDB1-213ENST00000539332 TULP1O00294 542 aaPredicted RBP12.33□□□□□ -0.44
DDB1-213ENST00000539332 NBPF1Q3BBV0 1214 aa12.33□□□□□ -0.44
DDB1-213ENST00000539332 C11orf95C9JLR9 678 aaPredicted RBP12.33□□□□□ -0.44
DDB1-213ENST00000539332 SLIT1O75093 1534 aa12.32□□□□□ -0.44
DDB1-213ENST00000539332 THEMISQ8N1K5 641 aaPredicted RBP12.32□□□□□ -0.44
DDB1-213ENST00000539332 KIF7Q2M1P5 1343 aa12.32□□□□□ -0.44
DDB1-213ENST00000539332 ARHGAP23Q9P227 1491 aa12.31□□□□□ -0.44
DDB1-213ENST00000539332 CFAP70Q5T0N1 1121 aa12.31□□□□□ -0.44
DDB1-213ENST00000539332 SCAF11Q99590 1463 aaKnown RBP12.31□□□□□ -0.44
DDB1-213ENST00000539332 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.3□□□□□ -0.44
DDB1-213ENST00000539332 ADGRB1O14514 1584 aa12.3□□□□□ -0.44
DDB1-213ENST00000539332 HDGFP51858 240 aaKnown RBP12.3□□□□□ -0.44
DDB1-213ENST00000539332 BCANQ96GW7 911 aa12.3□□□□□ -0.44
DDB1-213ENST00000539332 C14orf93Q9H972 538 aaKnown RBP12.3□□□□□ -0.44
DDB1-213ENST00000539332 NRXN3Q9Y4C0 1643 aa12.29□□□□□ -0.44
DDB1-213ENST00000539332 SETD1AO15047 1707 aaKnown RBP12.28□□□□□ -0.44
DDB1-213ENST00000539332 ST20-MTHFSA0A0A6YYL1 179 aa12.28□□□□□ -0.44
DDB1-213ENST00000539332 LTKP29376 864 aa12.28□□□□□ -0.44
DDB1-213ENST00000539332 HOMEZQ8IX15 550 aa12.28□□□□□ -0.44
DDB1-213ENST00000539332 SENP3Q9H4L4 574 aaPredicted RBP12.28□□□□□ -0.44
DDB1-213ENST00000539332 ALKQ9UM73 1620 aa12.28□□□□□ -0.44
DDB1-213ENST00000539332 ARHGEF28Q8N1W1 1705 aaKnown RBP12.27□□□□□ -0.45
DDB1-213ENST00000539332 TXNDC2Q86VQ3 553 aa12.27□□□□□ -0.45
DDB1-213ENST00000539332 TESK2Q96S53 571 aa12.27□□□□□ -0.45
DDB1-213ENST00000539332 EID1Q9Y6B2 187 aa12.27□□□□□ -0.45
DDB1-213ENST00000539332 PLEKHG1Q9ULL1 1385 aa12.26□□□□□ -0.45
DDB1-213ENST00000539332 MYOM1P52179 1685 aa12.25□□□□□ -0.45
DDB1-213ENST00000539332 ASXL1Q8IXJ9 1541 aa12.25□□□□□ -0.45
DDB1-213ENST00000539332 TMEM132EQ6IEE7 984 aa12.25□□□□□ -0.45
DDB1-213ENST00000539332 QRICH2Q9H0J4 1663 aa12.24□□□□□ -0.45
DDB1-213ENST00000539332 EIF3AQ14152 1382 aaKnown RBP12.24□□□□□ -0.45
DDB1-213ENST00000539332 SBNO2Q9Y2G9 1366 aa12.24□□□□□ -0.45
DDB1-213ENST00000539332 ANKLE2Q86XL3 938 aa12.23□□□□□ -0.45
DDB1-213ENST00000539332 ADAMTS13Q76LX8 1427 aa12.22□□□□□ -0.45
DDB1-213ENST00000539332 CCER2I3L3R5 266 aa12.22□□□□□ -0.45
DDB1-213ENST00000539332 DISP3Q9P2K9 1392 aa12.22□□□□□ -0.45
DDB1-213ENST00000539332 MED14O60244 1454 aa12.21□□□□□ -0.45
DDB1-213ENST00000539332 LMTK3Q96Q04 1460 aa12.21□□□□□ -0.45
DDB1-213ENST00000539332 ANP32CO43423 234 aa12.21□□□□□ -0.45
DDB1-213ENST00000539332 YTHDC2Q9H6S0 1430 aaKnown RBP12.2□□□□□ -0.46
DDB1-213ENST00000539332 TPRNQ4KMQ1 711 aa12.2□□□□□ -0.46
DDB1-213ENST00000539332 METP08581 1390 aa12.2□□□□□ -0.46
DDB1-213ENST00000539332 DIP2AQ14689 1571 aa12.2□□□□□ -0.46
DDB1-213ENST00000539332 YTHDC1Q96MU7 727 aaKnown RBP12.2□□□□□ -0.46
DDB1-213ENST00000539332 SLC26A8Q96RN1 970 aa12.19□□□□□ -0.46
DDB1-213ENST00000539332 TRAK1Q9UPV9 953 aa12.19□□□□□ -0.46
DDB1-213ENST00000539332 KNDC1Q76NI1 1749 aa12.18□□□□□ -0.46
DDB1-213ENST00000539332 STK26Q9P289 416 aa12.18□□□□□ -0.46
DDB1-213ENST00000539332 TBX22Q9Y458 520 aa12.18□□□□□ -0.46
DDB1-213ENST00000539332 LRPPRCP42704 1394 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms