RNA–Protein interactions for RNA: ENST00000539061.5

C2CD3-213, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2 BASIC

Gene C2CD3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-213ENST00000539061 PLA2R1Q13018 1463 aa22.2■■□□□ 1.14
C2CD3-213ENST00000539061 MAGI2Q86UL8 1455 aa22.19■■□□□ 1.14
C2CD3-213ENST00000539061 MAPK8IP3Q9UPT6 1336 aa22.19■■□□□ 1.14
C2CD3-213ENST00000539061 NKTRP30414 1462 aaKnown RBP22.18■■□□□ 1.14
C2CD3-213ENST00000539061 IGHDP01880 384 aa22.18■■□□□ 1.14
C2CD3-213ENST00000539061 AMER1Q5JTC6 1135 aaPredicted RBP22.18■■□□□ 1.14
C2CD3-213ENST00000539061 CCDC141Q6ZP82 1450 aa22.18■■□□□ 1.14
C2CD3-213ENST00000539061 WDR7Q9Y4E6 1490 aa22.17■■□□□ 1.14
C2CD3-213ENST00000539061 BCAR3O75815 825 aa22.16■■□□□ 1.14
C2CD3-213ENST00000539061 CGNL1Q0VF96 1302 aa22.16■■□□□ 1.14
C2CD3-213ENST00000539061 RSPH4AQ5TD94 716 aa22.15■■□□□ 1.14
C2CD3-213ENST00000539061 VIRMAQ69YN4 1812 aaKnown RBP22.15■■□□□ 1.14
C2CD3-213ENST00000539061 PIK3C2GO75747 1445 aa22.15■■□□□ 1.14
C2CD3-213ENST00000539061 E9PSI1 815 aa22.15■■□□□ 1.14
C2CD3-213ENST00000539061 PDE3AQ14432 1141 aa22.14■■□□□ 1.13
C2CD3-213ENST00000539061 SEC24BO95487 1268 aa22.14■■□□□ 1.13
C2CD3-213ENST00000539061 SLKQ9H2G2 1235 aaPredicted RBP22.14■■□□□ 1.13
C2CD3-213ENST00000539061 SPINK5Q9NQ38 1064 aaPredicted RBP22.14■■□□□ 1.13
C2CD3-213ENST00000539061 CDCA8Q53HL2 280 aa22.13■■□□□ 1.13
C2CD3-213ENST00000539061 CCDC146Q8IYE0 955 aa22.13■■□□□ 1.13
C2CD3-213ENST00000539061 ATP10BO94823 1461 aa22.12■■□□□ 1.13
C2CD3-213ENST00000539061 APAF1O14727 1248 aa22.12■■□□□ 1.13
C2CD3-213ENST00000539061 RRAGDQ9NQL2 400 aaPredicted RBP22.12■■□□□ 1.13
C2CD3-213ENST00000539061 ERCC6L2Q5T890 1561 aa22.11■■□□□ 1.13
C2CD3-213ENST00000539061 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.11■■□□□ 1.13
C2CD3-213ENST00000539061 CLUAP1Q96AJ1 413 aa22.11■■□□□ 1.13
C2CD3-213ENST00000539061 ABCA8O94911 1581 aa22.1■■□□□ 1.13
C2CD3-213ENST00000539061 NINLQ9Y2I6 1382 aa22.1■■□□□ 1.13
C2CD3-213ENST00000539061 ANTXR1Q9H6X2 564 aa22.1■■□□□ 1.13
C2CD3-213ENST00000539061 NGEFQ8N5V2 710 aa22.09■■□□□ 1.13
C2CD3-213ENST00000539061 MYO5CQ9NQX4 1742 aa22.09■■□□□ 1.13
C2CD3-213ENST00000539061 ASXL1Q8IXJ9 1541 aa22.09■■□□□ 1.13
C2CD3-213ENST00000539061 UPF2Q9HAU5 1272 aaKnown RBP22.09■■□□□ 1.13
C2CD3-213ENST00000539061 ABCC2Q92887 1545 aa22.09■■□□□ 1.13
C2CD3-213ENST00000539061 UNC13BO14795 1591 aa22.08■■□□□ 1.13
C2CD3-213ENST00000539061 NPC1L1Q9UHC9 1359 aa22.07■■□□□ 1.12
C2CD3-213ENST00000539061 RNF17Q9BXT8 1623 aaKnown RBP22.06■■□□□ 1.12
C2CD3-213ENST00000539061 NLRP1Q9C000 1473 aa22.06■■□□□ 1.12
C2CD3-213ENST00000539061 SYNMO15061 1565 aa22.05■■□□□ 1.12
C2CD3-213ENST00000539061 CANXP27824 592 aaKnown RBP22.05■■□□□ 1.12
C2CD3-213ENST00000539061 ATP10AO60312 1499 aa22.05■■□□□ 1.12
C2CD3-213ENST00000539061 CENPJQ9HC77 1338 aaPredicted RBP22.04■■□□□ 1.12
C2CD3-213ENST00000539061 COG6Q9Y2V7 657 aa22.04■■□□□ 1.12
C2CD3-213ENST00000539061 SHROOM2Q13796 1616 aa22.04■■□□□ 1.12
C2CD3-213ENST00000539061 SAMD9LQ8IVG5 1584 aa22.04■■□□□ 1.12
C2CD3-213ENST00000539061 TBC1D32Q96NH3 1257 aa22.03■■□□□ 1.12
C2CD3-213ENST00000539061 PMFBP1Q8TBY8 1022 aa22.02■■□□□ 1.12
C2CD3-213ENST00000539061 PANK1Q8TE04 598 aa22.02■■□□□ 1.12
C2CD3-213ENST00000539061 GOLGA6L3A6NEY3 463 aa22.02■■□□□ 1.12
C2CD3-213ENST00000539061 ZMYM3Q14202 1370 aa22.02■■□□□ 1.12
C2CD3-213ENST00000539061 AAMPQ13685 434 aa22.01■■□□□ 1.11
C2CD3-213ENST00000539061 TBC1D2Q9BYX2 928 aa22.01■■□□□ 1.11
C2CD3-213ENST00000539061 IQGAP3Q86VI3 1631 aa22.01■■□□□ 1.11
C2CD3-213ENST00000539061 XRCC6P12956 609 aaKnown RBP eCLIP22■■□□□ 1.11
C2CD3-213ENST00000539061 DMRT2Q9Y5R5 561 aa22■■□□□ 1.11
C2CD3-213ENST00000539061 FSD2A1L4K1 749 aa21.99■■□□□ 1.11
C2CD3-213ENST00000539061 MAST1Q9Y2H9 1570 aa21.98■■□□□ 1.11
C2CD3-213ENST00000539061 PLXNC1O60486 1568 aa21.96■■□□□ 1.11
C2CD3-213ENST00000539061 IQGAP1P46940 1657 aa21.96■■□□□ 1.11
C2CD3-213ENST00000539061 MCM4P33991 863 aa21.96■■□□□ 1.11
C2CD3-213ENST00000539061 SCAF11Q99590 1463 aaKnown RBP21.96■■□□□ 1.11
C2CD3-213ENST00000539061 PREX2Q70Z35 1606 aa21.95■■□□□ 1.1
C2CD3-213ENST00000539061 CDC42BPBQ9Y5S2 1711 aa21.95■■□□□ 1.1
C2CD3-213ENST00000539061 CLCN1P35523 988 aa21.95■■□□□ 1.1
C2CD3-213ENST00000539061 GLIPR1L2Q4G1C9 344 aa21.95■■□□□ 1.1
C2CD3-213ENST00000539061 PNNQ9H307 717 aaKnown RBP21.95■■□□□ 1.1
C2CD3-213ENST00000539061 WWC1Q8IX03 1113 aa21.94■■□□□ 1.1
C2CD3-213ENST00000539061 ARXQ96QS3 562 aa21.94■■□□□ 1.1
C2CD3-213ENST00000539061 PDZRN3Q9UPQ7 1066 aa21.93■■□□□ 1.1
C2CD3-213ENST00000539061 SYCP2Q9BX26 1530 aa21.93■■□□□ 1.1
C2CD3-213ENST00000539061 OSCARQ8IYS5 282 aa21.93■■□□□ 1.1
C2CD3-213ENST00000539061 STAC3Q96MF2 364 aa21.93■■□□□ 1.1
C2CD3-213ENST00000539061 NAP1L5Q96NT1 182 aaPredicted RBP21.92■■□□□ 1.1
C2CD3-213ENST00000539061 PCDHB15Q9Y5E8 787 aa21.92■■□□□ 1.1
C2CD3-213ENST00000539061 MADDQ8WXG6 1647 aa21.92■■□□□ 1.1
C2CD3-213ENST00000539061 SCAPERQ9BY12 1400 aa21.92■■□□□ 1.1
C2CD3-213ENST00000539061 RWDD1Q9H446 243 aaPredicted RBP21.91■■□□□ 1.1
C2CD3-213ENST00000539061 CHMP5Q9NZZ3 219 aa21.91■■□□□ 1.1
C2CD3-213ENST00000539061 RARSP54136 660 aaKnown RBP21.9■■□□□ 1.1
C2CD3-213ENST00000539061 GZF1Q9H116 711 aaPredicted RBP21.9■■□□□ 1.1
C2CD3-213ENST00000539061 PANK2Q9BZ23 570 aa21.89■■□□□ 1.1
C2CD3-213ENST00000539061 MYOM1P52179 1685 aa21.89■■□□□ 1.09
C2CD3-213ENST00000539061 DUOX2Q9NRD8 1548 aa21.88■■□□□ 1.09
C2CD3-213ENST00000539061 TRAK2O60296 914 aa21.88■■□□□ 1.09
C2CD3-213ENST00000539061 MRE11P49959 708 aa21.88■■□□□ 1.09
C2CD3-213ENST00000539061 SPRYD3Q8NCJ5 442 aa21.88■■□□□ 1.09
C2CD3-213ENST00000539061 SLC24A1O60721 1099 aa21.87■■□□□ 1.09
C2CD3-213ENST00000539061 POLR3AO14802 1390 aaPredicted RBP21.86■■□□□ 1.09
C2CD3-213ENST00000539061 ARHGAP5Q13017 1502 aa21.86■■□□□ 1.09
C2CD3-213ENST00000539061 RLBP1P12271 317 aa21.85■■□□□ 1.09
C2CD3-213ENST00000539061 HSP90AA1P07900 732 aaKnown RBP21.84■■□□□ 1.09
C2CD3-213ENST00000539061 C22orf23Q9BZE7 217 aa21.84■■□□□ 1.09
C2CD3-213ENST00000539061 KDM5AP29375 1690 aaKnown RBP21.83■■□□□ 1.09
C2CD3-213ENST00000539061 CARD14Q9BXL6 1004 aa21.82■■□□□ 1.08
C2CD3-213ENST00000539061 ISY1Q9ULR0 285 aaKnown RBP21.82■■□□□ 1.08
C2CD3-213ENST00000539061 NEUROD2Q15784 382 aa21.81■■□□□ 1.08
C2CD3-213ENST00000539061 RUNDC1Q96C34 613 aa21.81■■□□□ 1.08
C2CD3-213ENST00000539061 TNNQ9UQP3 1299 aa21.81■■□□□ 1.08
C2CD3-213ENST00000539061 DDX11L8A8MPP1 907 aa21.81■■□□□ 1.08
C2CD3-213ENST00000539061 RRP9O43818 475 aaKnown RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms