RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 ZNF326Q5BKZ1 582 aaKnown RBP24.92■■□□□ 1.58
CLN6-202ENST00000538696 THEMISQ8N1K5 641 aaPredicted RBP24.92■■□□□ 1.58
CLN6-202ENST00000538696 AEBP2Q6ZN18 517 aaPredicted RBP24.91■■□□□ 1.58
CLN6-202ENST00000538696 HSPA2P54652 639 aa24.89■■□□□ 1.58
CLN6-202ENST00000538696 STRCQ7RTU9 1775 aa24.88■■□□□ 1.57
CLN6-202ENST00000538696 RPGRIP1LQ68CZ1 1315 aa24.87■■□□□ 1.57
CLN6-202ENST00000538696 MYOM2P54296 1465 aa24.87■■□□□ 1.57
CLN6-202ENST00000538696 TONSLQ96HA7 1378 aa24.87■■□□□ 1.57
CLN6-202ENST00000538696 SCAF11Q99590 1463 aaKnown RBP24.86■■□□□ 1.57
CLN6-202ENST00000538696 L3MBTL2Q969R5 705 aa24.84■■□□□ 1.57
CLN6-202ENST00000538696 IQGAP1P46940 1657 aa24.83■■□□□ 1.57
CLN6-202ENST00000538696 LTKP29376 864 aa24.83■■□□□ 1.56
CLN6-202ENST00000538696 NUTM2DQ5VT03 806 aaPredicted RBP24.83■■□□□ 1.56
CLN6-202ENST00000538696 NRXN3Q9Y4C0 1643 aa24.82■■□□□ 1.56
CLN6-202ENST00000538696 NRXN1Q9ULB1 1477 aa24.81■■□□□ 1.56
CLN6-202ENST00000538696 TXNDC2Q86VQ3 553 aa24.8■■□□□ 1.56
CLN6-202ENST00000538696 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.8■■□□□ 1.56
CLN6-202ENST00000538696 DCAF11Q8TEB1 546 aa24.8■■□□□ 1.56
CLN6-202ENST00000538696 ANKLE2Q86XL3 938 aa24.79■■□□□ 1.56
CLN6-202ENST00000538696 EID1Q9Y6B2 187 aa24.79■■□□□ 1.56
CLN6-202ENST00000538696 MED14O60244 1454 aa24.79■■□□□ 1.56
CLN6-202ENST00000538696 SETBP1Q9Y6X0 1596 aa24.79■■□□□ 1.56
CLN6-202ENST00000538696 PLEKHG1Q9ULL1 1385 aa24.78■■□□□ 1.56
CLN6-202ENST00000538696 ADGRF5Q8IZF2 1346 aa24.78■■□□□ 1.56
CLN6-202ENST00000538696 NCKAP5LQ9HCH0 1330 aa24.78■■□□□ 1.56
CLN6-202ENST00000538696 SETD1AO15047 1707 aaKnown RBP24.77■■□□□ 1.56
CLN6-202ENST00000538696 PPP1R15AO75807 674 aaPredicted RBP24.77■■□□□ 1.56
CLN6-202ENST00000538696 HDGFP51858 240 aaKnown RBP24.77■■□□□ 1.56
CLN6-202ENST00000538696 PIK3C2GO75747 1445 aa24.76■■□□□ 1.55
CLN6-202ENST00000538696 KDM2AQ9Y2K7 1162 aa24.76■■□□□ 1.55
CLN6-202ENST00000538696 NPHP4O75161 1426 aaPredicted RBP24.75■■□□□ 1.55
CLN6-202ENST00000538696 VGFO15240 615 aaPredicted RBP24.75■■□□□ 1.55
CLN6-202ENST00000538696 TIMELESSQ9UNS1 1208 aa24.75■■□□□ 1.55
CLN6-202ENST00000538696 PRAG1Q86YV5 1406 aa24.74■■□□□ 1.55
CLN6-202ENST00000538696 LAMC1P11047 1609 aa24.73■■□□□ 1.55
CLN6-202ENST00000538696 KIAA1210Q9ULL0 1709 aa24.72■■□□□ 1.55
CLN6-202ENST00000538696 STAC3Q96MF2 364 aa24.72■■□□□ 1.55
CLN6-202ENST00000538696 TRPM1Q7Z4N2 1603 aa24.71■■□□□ 1.55
CLN6-202ENST00000538696 ALKQ9UM73 1620 aa24.71■■□□□ 1.55
CLN6-202ENST00000538696 ADAMTS13Q76LX8 1427 aa24.71■■□□□ 1.55
CLN6-202ENST00000538696 DIP2AQ14689 1571 aa24.71■■□□□ 1.55
CLN6-202ENST00000538696 SENP3Q9H4L4 574 aaPredicted RBP24.7■■□□□ 1.54
CLN6-202ENST00000538696 ASXL1Q8IXJ9 1541 aa24.67■■□□□ 1.54
CLN6-202ENST00000538696 NBPF8Q3BBV2 869 aa24.65■■□□□ 1.54
CLN6-202ENST00000538696 BCANQ96GW7 911 aa24.63■■□□□ 1.53
CLN6-202ENST00000538696 ADGRB1O14514 1584 aa24.62■■□□□ 1.53
CLN6-202ENST00000538696 SLC26A8Q96RN1 970 aa24.61■■□□□ 1.53
CLN6-202ENST00000538696 RALGAPBQ86X10 1494 aa24.61■■□□□ 1.53
CLN6-202ENST00000538696 CFAP70Q5T0N1 1121 aa24.61■■□□□ 1.53
CLN6-202ENST00000538696 C14orf93Q9H972 538 aaKnown RBP24.61■■□□□ 1.53
CLN6-202ENST00000538696 CHD2O14647 1828 aaKnown RBP24.6■■□□□ 1.53
CLN6-202ENST00000538696 TBX22Q9Y458 520 aa24.58■■□□□ 1.52
CLN6-202ENST00000538696 METP08581 1390 aa24.57■■□□□ 1.52
CLN6-202ENST00000538696 NWD1Q149M9 1564 aa24.57■■□□□ 1.52
CLN6-202ENST00000538696 KNDC1Q76NI1 1749 aa24.57■■□□□ 1.52
CLN6-202ENST00000538696 XRN1Q8IZH2 1706 aaKnown RBP24.57■■□□□ 1.52
CLN6-202ENST00000538696 STRCP1A6NGW2 1772 aa24.57■■□□□ 1.52
CLN6-202ENST00000538696 DMRT2Q9Y5R5 561 aa24.55■■□□□ 1.52
CLN6-202ENST00000538696 PTPRUQ92729 1446 aa24.55■■□□□ 1.52
CLN6-202ENST00000538696 PIK3R4Q99570 1358 aa24.54■■□□□ 1.52
CLN6-202ENST00000538696 NBPF1Q3BBV0 1214 aa24.53■■□□□ 1.52
CLN6-202ENST00000538696 GPRASP1Q5JY77 1395 aa24.52■■□□□ 1.52
CLN6-202ENST00000538696 ROCK2O75116 1388 aaKnown RBP24.51■■□□□ 1.51
CLN6-202ENST00000538696 TMEM132EQ6IEE7 984 aa24.51■■□□□ 1.51
CLN6-202ENST00000538696 ARHGEF28Q8N1W1 1705 aaKnown RBP24.5■■□□□ 1.51
CLN6-202ENST00000538696 YTHDC2Q9H6S0 1430 aaKnown RBP24.49■■□□□ 1.51
CLN6-202ENST00000538696 CPS1P31327 1500 aa24.49■■□□□ 1.51
CLN6-202ENST00000538696 LRPPRCP42704 1394 aaKnown RBP24.48■■□□□ 1.51
CLN6-202ENST00000538696 TECPR2O15040 1411 aa24.46■■□□□ 1.51
CLN6-202ENST00000538696 DLC1Q96QB1 1528 aa24.45■■□□□ 1.5
CLN6-202ENST00000538696 ZNF335Q9H4Z2 1342 aaPredicted RBP24.45■■□□□ 1.5
CLN6-202ENST00000538696 NKTRP30414 1462 aaKnown RBP24.44■■□□□ 1.5
CLN6-202ENST00000538696 KCNA6P17658 529 aa24.43■■□□□ 1.5
CLN6-202ENST00000538696 PTCH1Q13635 1447 aa24.43■■□□□ 1.5
CLN6-202ENST00000538696 AMOTL2Q9Y2J4 779 aa24.42■■□□□ 1.5
CLN6-202ENST00000538696 ABCC11Q96J66 1382 aa24.42■■□□□ 1.5
CLN6-202ENST00000538696 ZNF316A6NFI3 1004 aaPredicted RBP24.41■■□□□ 1.5
CLN6-202ENST00000538696 CARD11Q9BXL7 1154 aa24.41■■□□□ 1.5
CLN6-202ENST00000538696 STK26Q9P289 416 aa24.41■■□□□ 1.5
CLN6-202ENST00000538696 LTBP4Q8N2S1 1624 aa24.4■■□□□ 1.5
CLN6-202ENST00000538696 XIRP1Q702N8 1843 aaKnown RBP24.4■■□□□ 1.5
CLN6-202ENST00000538696 ROBO2Q9HCK4 1378 aa24.4■■□□□ 1.5
CLN6-202ENST00000538696 TRAK1Q9UPV9 953 aa24.38■■□□□ 1.49
CLN6-202ENST00000538696 QRICH2Q9H0J4 1663 aa24.37■■□□□ 1.49
CLN6-202ENST00000538696 FAM135BQ49AJ0 1406 aa24.36■■□□□ 1.49
CLN6-202ENST00000538696 NALCNQ8IZF0 1738 aa24.35■■□□□ 1.49
CLN6-202ENST00000538696 USP47Q96K76 1375 aa24.34■■□□□ 1.49
CLN6-202ENST00000538696 PLEKHH1Q9ULM0 1364 aa24.34■■□□□ 1.49
CLN6-202ENST00000538696 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.34■■□□□ 1.49
CLN6-202ENST00000538696 LRRC7Q96NW7 1537 aa24.34■■□□□ 1.49
CLN6-202ENST00000538696 EIF3AQ14152 1382 aaKnown RBP24.32■■□□□ 1.48
CLN6-202ENST00000538696 SIRT1Q96EB6 747 aa24.32■■□□□ 1.48
CLN6-202ENST00000538696 WAPLQ7Z5K2 1190 aa24.3■■□□□ 1.48
CLN6-202ENST00000538696 PRAM1Q96QH2 718 aa24.3■■□□□ 1.48
CLN6-202ENST00000538696 TMEM94Q12767 1356 aa24.28■■□□□ 1.48
CLN6-202ENST00000538696 PROSER2Q86WR7 435 aaPredicted RBP24.28■■□□□ 1.48
CLN6-202ENST00000538696 ADGRB2O60241 1585 aa24.27■■□□□ 1.48
CLN6-202ENST00000538696 CENPJQ9HC77 1338 aaPredicted RBP24.27■■□□□ 1.48
CLN6-202ENST00000538696 RBM33Q96EV2 1170 aaKnown RBP24.26■■□□□ 1.47
CLN6-202ENST00000538696 POGKQ9P215 609 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms