RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 TRAK2O60296 914 aa8.4□□□□□ -1.07
SORT1-209ENST00000538502 API5Q9BZZ5 524 aaKnown RBP8.4□□□□□ -1.07
SORT1-209ENST00000538502 MCTP1Q6DN14 999 aa8.39□□□□□ -1.07
SORT1-209ENST00000538502 SYNE3Q6ZMZ3 975 aa8.39□□□□□ -1.07
SORT1-209ENST00000538502 TSPY26PQ9H489 355 aa8.39□□□□□ -1.07
SORT1-209ENST00000538502 SMARCA2P51531 1590 aa8.39□□□□□ -1.07
SORT1-209ENST00000538502 NOL8Q76FK4 1167 aaKnown RBP8.39□□□□□ -1.07
SORT1-209ENST00000538502 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.39□□□□□ -1.07
SORT1-209ENST00000538502 AKAP17AQ02040 695 aaKnown RBP8.39□□□□□ -1.07
SORT1-209ENST00000538502 MIA2Q96PC5 1412 aa8.39□□□□□ -1.07
SORT1-209ENST00000538502 BRD4O60885 1362 aaPredicted RBP8.39□□□□□ -1.07
SORT1-209ENST00000538502 SMC3Q9UQE7 1217 aa8.38□□□□□ -1.07
SORT1-209ENST00000538502 CCDC73Q6ZRK6 1079 aa8.38□□□□□ -1.07
SORT1-209ENST00000538502 CCDC146Q8IYE0 955 aa8.38□□□□□ -1.07
SORT1-209ENST00000538502 BICD2Q8TD16 824 aa8.38□□□□□ -1.07
SORT1-209ENST00000538502 CLUAP1Q96AJ1 413 aa8.38□□□□□ -1.07
SORT1-209ENST00000538502 CWC22Q9HCG8 908 aaKnown RBP8.38□□□□□ -1.07
SORT1-209ENST00000538502 CCDC88BA6NC98 1476 aa8.38□□□□□ -1.07
SORT1-209ENST00000538502 FOXD4L5Q5VV16 416 aaPredicted RBP8.38□□□□□ -1.07
SORT1-209ENST00000538502 DZIP1LQ8IYY4 767 aaKnown RBP8.38□□□□□ -1.07
SORT1-209ENST00000538502 FOXD4L4Q8WXT5 416 aaPredicted RBP8.38□□□□□ -1.07
SORT1-209ENST00000538502 RILPL2Q969X0 211 aa8.38□□□□□ -1.07
SORT1-209ENST00000538502 PODXL2Q9NZ53 605 aa8.38□□□□□ -1.07
SORT1-209ENST00000538502 TAF7LQ5H9L4 462 aa8.38□□□□□ -1.07
SORT1-209ENST00000538502 CREBRFQ8IUR6 639 aa8.38□□□□□ -1.07
SORT1-209ENST00000538502 USP47Q96K76 1375 aa8.38□□□□□ -1.07
SORT1-209ENST00000538502 CUX1P39880 1505 aa8.38□□□□□ -1.07
SORT1-209ENST00000538502 RAPGEF2Q9Y4G8 1499 aa8.37□□□□□ -1.07
SORT1-209ENST00000538502 CDC45O75419 566 aa8.37□□□□□ -1.07
SORT1-209ENST00000538502 ABCC8Q09428 1581 aa8.37□□□□□ -1.07
SORT1-209ENST00000538502 H0YHG0 523 aa8.37□□□□□ -1.07
SORT1-209ENST00000538502 SENP3Q9H4L4 574 aaPredicted RBP8.37□□□□□ -1.07
SORT1-209ENST00000538502 PES1O00541 588 aaKnown RBP8.37□□□□□ -1.07
SORT1-209ENST00000538502 ZRSR2Q15696 482 aaKnown RBP8.37□□□□□ -1.07
SORT1-209ENST00000538502 HSP90AB4PQ58FF6 505 aa8.37□□□□□ -1.07
SORT1-209ENST00000538502 OLFM4Q6UX06 510 aa8.37□□□□□ -1.07
SORT1-209ENST00000538502 STAC3Q96MF2 364 aa8.36□□□□□ -1.07
SORT1-209ENST00000538502 CCDC144AA2RUR9 1427 aa8.36□□□□□ -1.07
SORT1-209ENST00000538502 SLC4A10Q6U841 1118 aa8.36□□□□□ -1.07
SORT1-209ENST00000538502 ANO2Q9NQ90 1003 aa8.36□□□□□ -1.07
SORT1-209ENST00000538502 EIF3JO75822 258 aaKnown RBP8.36□□□□□ -1.07
SORT1-209ENST00000538502 PDIA4P13667 645 aaKnown RBP8.36□□□□□ -1.07
SORT1-209ENST00000538502 CIZ1Q9ULV3 898 aaPredicted RBP8.36□□□□□ -1.07
SORT1-209ENST00000538502 WWC1Q8IX03 1113 aa8.35□□□□□ -1.07
SORT1-209ENST00000538502 MARCH6O60337 910 aa8.35□□□□□ -1.07
SORT1-209ENST00000538502 RABEP1Q15276 862 aa8.35□□□□□ -1.07
SORT1-209ENST00000538502 PSMA5P28066 241 aa8.35□□□□□ -1.07
SORT1-209ENST00000538502 SMARCE1Q969G3 411 aa8.35□□□□□ -1.07
SORT1-209ENST00000538502 PCMTD1Q96MG8 357 aaPredicted RBP8.35□□□□□ -1.07
SORT1-209ENST00000538502 PANK3Q9H999 370 aa8.35□□□□□ -1.07
SORT1-209ENST00000538502 TXLNBQ8N3L3 684 aa8.34□□□□□ -1.07
SORT1-209ENST00000538502 COG6Q9Y2V7 657 aa8.34□□□□□ -1.07
SORT1-209ENST00000538502 CCDC7Q96M83 1385 aa8.34□□□□□ -1.07
SORT1-209ENST00000538502 ERC2O15083 957 aa8.34□□□□□ -1.07
SORT1-209ENST00000538502 ERLIN1O75477 346 aa8.34□□□□□ -1.07
SORT1-209ENST00000538502 PIP4K2AP48426 406 aaPredicted RBP8.34□□□□□ -1.07
SORT1-209ENST00000538502 LMOD2Q6P5Q4 547 aa8.34□□□□□ -1.07
SORT1-209ENST00000538502 RUNDC1Q96C34 613 aa8.34□□□□□ -1.07
SORT1-209ENST00000538502 GRPEL1Q9HAV7 217 aa8.34□□□□□ -1.08
SORT1-209ENST00000538502 PLIN1O60240 522 aa8.33□□□□□ -1.08
SORT1-209ENST00000538502 GOLGA6L7A0A1B0GV03 622 aa8.33□□□□□ -1.08
SORT1-209ENST00000538502 PDCP20941 246 aa8.33□□□□□ -1.08
SORT1-209ENST00000538502 FOXD1Q16676 465 aa8.33□□□□□ -1.08
SORT1-209ENST00000538502 PRKCSHP14314 528 aaPredicted RBP8.33□□□□□ -1.08
SORT1-209ENST00000538502 KIAA0754O94854 1291 aa8.33□□□□□ -1.08
SORT1-209ENST00000538502 TMX4Q9H1E5 349 aaPredicted RBP8.33□□□□□ -1.08
SORT1-209ENST00000538502 SMG6Q86US8 1419 aaKnown RBP8.32□□□□□ -1.08
SORT1-209ENST00000538502 UQCRHLA0A096LP55 91 aa8.32□□□□□ -1.08
SORT1-209ENST00000538502 PATL2C9JE40 543 aaKnown RBP8.32□□□□□ -1.08
SORT1-209ENST00000538502 UQCRHP07919 91 aa8.32□□□□□ -1.08
SORT1-209ENST00000538502 CHMP3Q9Y3E7 222 aa8.32□□□□□ -1.08
SORT1-209ENST00000538502 KIF2AO00139 706 aaPredicted RBP8.32□□□□□ -1.08
SORT1-209ENST00000538502 CPLX1O14810 134 aa8.32□□□□□ -1.08
SORT1-209ENST00000538502 SAFBQ15424 915 aaKnown RBP eCLIP8.32□□□□□ -1.08
SORT1-209ENST00000538502 EFCAB2Q5VUJ9 269 aa8.32□□□□□ -1.08
SORT1-209ENST00000538502 AEBP1Q8IUX7 1158 aa8.32□□□□□ -1.08
SORT1-209ENST00000538502 DEF6Q9H4E7 631 aa8.32□□□□□ -1.08
SORT1-209ENST00000538502 SCAPERQ9BY12 1400 aa8.32□□□□□ -1.08
SORT1-209ENST00000538502 EVC2Q86UK5 1308 aa8.32□□□□□ -1.08
SORT1-209ENST00000538502 CAGE1Q8TC20 777 aa8.32□□□□□ -1.08
SORT1-209ENST00000538502 CCDC112Q8NEF3 446 aa8.31□□□□□ -1.08
SORT1-209ENST00000538502 BRPF3Q9ULD4 1205 aa8.31□□□□□ -1.08
SORT1-209ENST00000538502 HIP1O00291 1037 aa8.31□□□□□ -1.08
SORT1-209ENST00000538502 FILIP1LQ4L180 1135 aa8.31□□□□□ -1.08
SORT1-209ENST00000538502 WASHC2AQ641Q2 1341 aa8.31□□□□□ -1.08
SORT1-209ENST00000538502 WASHC2CQ9Y4E1 1318 aa8.31□□□□□ -1.08
SORT1-209ENST00000538502 IQCEQ6IPM2 695 aa8.31□□□□□ -1.08
SORT1-209ENST00000538502 AMOTL1Q8IY63 956 aa8.31□□□□□ -1.08
SORT1-209ENST00000538502 IFIT2P09913 472 aaKnown RBP8.31□□□□□ -1.08
SORT1-209ENST00000538502 TRIM5Q9C035 493 aa8.31□□□□□ -1.08
SORT1-209ENST00000538502 TRDNQ13061 729 aa8.31□□□□□ -1.08
SORT1-209ENST00000538502 PDE3AQ14432 1141 aa8.31□□□□□ -1.08
SORT1-209ENST00000538502 ZNF396Q96N95 335 aaPredicted RBP8.31□□□□□ -1.08
SORT1-209ENST00000538502 ANO8Q9HCE9 1232 aaPredicted RBP8.31□□□□□ -1.08
SORT1-209ENST00000538502 ST20-MTHFSA0A0A6YYL1 179 aa8.3□□□□□ -1.08
SORT1-209ENST00000538502 CCDC192P0DO97 292 aa8.3□□□□□ -1.08
SORT1-209ENST00000538502 GCC1Q96CN9 775 aa8.3□□□□□ -1.08
SORT1-209ENST00000538502 INCENPQ9NQS7 918 aa8.3□□□□□ -1.08
SORT1-209ENST00000538502 DACH1Q9UI36 760 aa8.3□□□□□ -1.08
SORT1-209ENST00000538502 CBFA2T2O43439 604 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms