RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 MAP3K4Q9Y6R4 1608 aa33.29■■■□□ 2.92
RAB40C-204ENST00000538492 KIAA1210Q9ULL0 1709 aa33.29■■■□□ 2.92
RAB40C-204ENST00000538492 NEURL4Q96JN8 1562 aa33.28■■■□□ 2.92
RAB40C-204ENST00000538492 ABCA6Q8N139 1617 aa33.27■■■□□ 2.92
RAB40C-204ENST00000538492 MROH2AA6NES4 1674 aa33.26■■■□□ 2.92
RAB40C-204ENST00000538492 SYNMO15061 1565 aa33.26■■■□□ 2.92
RAB40C-204ENST00000538492 CFAP65Q6ZU64 1925 aaKnown RBP33.25■■■□□ 2.91
RAB40C-204ENST00000538492 POGZQ7Z3K3 1410 aa33.25■■■□□ 2.91
RAB40C-204ENST00000538492 GGT6Q6P531 493 aa33.25■■■□□ 2.91
RAB40C-204ENST00000538492 CCDC136Q96JN2 1154 aa33.25■■■□□ 2.91
RAB40C-204ENST00000538492 CDCA7LQ96GN5 454 aa33.24■■■□□ 2.91
RAB40C-204ENST00000538492 MYOM2P54296 1465 aa33.24■■■□□ 2.91
RAB40C-204ENST00000538492 AMER1Q5JTC6 1135 aaPredicted RBP33.24■■■□□ 2.91
RAB40C-204ENST00000538492 CHGAP10645 457 aaKnown RBP33.23■■■□□ 2.91
RAB40C-204ENST00000538492 BLMP54132 1417 aaPredicted RBP33.23■■■□□ 2.91
RAB40C-204ENST00000538492 PDE3BQ13370 1112 aa33.22■■■□□ 2.91
RAB40C-204ENST00000538492 LMTK2Q8IWU2 1503 aa33.22■■■□□ 2.91
RAB40C-204ENST00000538492 MYOM1P52179 1685 aa33.22■■■□□ 2.91
RAB40C-204ENST00000538492 RCAN3Q9UKA8 241 aa33.21■■■□□ 2.91
RAB40C-204ENST00000538492 PPP2R1AP30153 589 aa33.21■■■□□ 2.91
RAB40C-204ENST00000538492 CFAP74Q9C0B2 1584 aa33.21■■■□□ 2.91
RAB40C-204ENST00000538492 IFT172Q9UG01 1749 aa33.21■■■□□ 2.91
RAB40C-204ENST00000538492 ANP32EQ9BTT0 268 aa33.2■■■□□ 2.91
RAB40C-204ENST00000538492 FRMPD1Q5SYB0 1578 aa33.19■■■□□ 2.9
RAB40C-204ENST00000538492 RRP1P56182 461 aaKnown RBP33.19■■■□□ 2.9
RAB40C-204ENST00000538492 ADAMTS8Q9UP79 889 aa33.18■■■□□ 2.9
RAB40C-204ENST00000538492 KDM5AP29375 1690 aaKnown RBP33.17■■■□□ 2.9
RAB40C-204ENST00000538492 MLH3Q9UHC1 1453 aa33.17■■■□□ 2.9
RAB40C-204ENST00000538492 HECW2Q9P2P5 1572 aa33.16■■■□□ 2.9
RAB40C-204ENST00000538492 NPATQ14207 1427 aa33.16■■■□□ 2.9
RAB40C-204ENST00000538492 ASXL1Q8IXJ9 1541 aa33.16■■■□□ 2.9
RAB40C-204ENST00000538492 INSRP06213 1382 aa33.15■■■□□ 2.9
RAB40C-204ENST00000538492 NOS1P29475 1434 aa33.15■■■□□ 2.9
RAB40C-204ENST00000538492 ZMYM4Q5VZL5 1548 aa33.15■■■□□ 2.9
RAB40C-204ENST00000538492 RAPGEF3O95398 923 aa33.13■■■□□ 2.89
RAB40C-204ENST00000538492 ERVK-7P63135 1459 aa33.12■■■□□ 2.89
RAB40C-204ENST00000538492 ADGRB3O60242 1522 aa33.12■■■□□ 2.89
RAB40C-204ENST00000538492 FANCIQ9NVI1 1328 aa33.1■■■□□ 2.89
RAB40C-204ENST00000538492 NRXN1Q9ULB1 1477 aa33.1■■■□□ 2.89
RAB40C-204ENST00000538492 WDR43Q15061 677 aaKnown RBP eCLIP33.1■■■□□ 2.89
RAB40C-204ENST00000538492 MSH5O43196 834 aa33.09■■■□□ 2.89
RAB40C-204ENST00000538492 EXOC6Q8TAG9 804 aa33.07■■■□□ 2.88
RAB40C-204ENST00000538492 SLC24A1O60721 1099 aa33.04■■■□□ 2.88
RAB40C-204ENST00000538492 TRAK1Q9UPV9 953 aa33.03■■■□□ 2.88
RAB40C-204ENST00000538492 ABCC3O15438 1527 aa33.02■■■□□ 2.88
RAB40C-204ENST00000538492 PPLO60437 1756 aa33.02■■■□□ 2.88
RAB40C-204ENST00000538492 NPC1L1Q9UHC9 1359 aa33.02■■■□□ 2.88
RAB40C-204ENST00000538492 CARD14Q9BXL6 1004 aa33.01■■■□□ 2.87
RAB40C-204ENST00000538492 PIK3C2GO75747 1445 aa33■■■□□ 2.87
RAB40C-204ENST00000538492 CENPJQ9HC77 1338 aaPredicted RBP33■■■□□ 2.87
RAB40C-204ENST00000538492 MYO3AQ8NEV4 1616 aa32.98■■■□□ 2.87
RAB40C-204ENST00000538492 NEO1Q92859 1461 aa32.98■■■□□ 2.87
RAB40C-204ENST00000538492 PLIN1O60240 522 aa32.98■■■□□ 2.87
RAB40C-204ENST00000538492 TMEM132EQ6IEE7 984 aa32.98■■■□□ 2.87
RAB40C-204ENST00000538492 SETBP1Q9Y6X0 1596 aa32.97■■■□□ 2.87
RAB40C-204ENST00000538492 PLEKHH1Q9ULM0 1364 aa32.97■■■□□ 2.87
RAB40C-204ENST00000538492 C14orf93Q9H972 538 aaKnown RBP32.96■■■□□ 2.87
RAB40C-204ENST00000538492 CAMSAP1Q5T5Y3 1602 aa32.96■■■□□ 2.87
RAB40C-204ENST00000538492 NUTM2DQ5VT03 806 aaPredicted RBP32.96■■■□□ 2.87
RAB40C-204ENST00000538492 SIGLEC1Q9BZZ2 1709 aa32.95■■■□□ 2.86
RAB40C-204ENST00000538492 SBNO2Q9Y2G9 1366 aa32.94■■■□□ 2.86
RAB40C-204ENST00000538492 DIP2CQ9Y2E4 1556 aa32.92■■■□□ 2.86
RAB40C-204ENST00000538492 CCDC146Q8IYE0 955 aa32.92■■■□□ 2.86
RAB40C-204ENST00000538492 ADGRB1O14514 1584 aa32.9■■■□□ 2.86
RAB40C-204ENST00000538492 RPGRIP1LQ68CZ1 1315 aa32.89■■■□□ 2.86
RAB40C-204ENST00000538492 QRICH2Q9H0J4 1663 aa32.88■■■□□ 2.85
RAB40C-204ENST00000538492 RICTORQ6R327 1708 aa32.85■■■□□ 2.85
RAB40C-204ENST00000538492 ZNF521Q96K83 1311 aa32.85■■■□□ 2.85
RAB40C-204ENST00000538492 ZC3H13Q5T200 1668 aaKnown RBP32.84■■■□□ 2.85
RAB40C-204ENST00000538492 DUSP27Q5VZP5 1158 aa32.84■■■□□ 2.85
RAB40C-204ENST00000538492 SLC12A5Q9H2X9 1139 aa32.84■■■□□ 2.85
RAB40C-204ENST00000538492 GOLGA2Q08379 1002 aa32.83■■■□□ 2.85
RAB40C-204ENST00000538492 YEATS2Q9ULM3 1422 aa32.83■■■□□ 2.85
RAB40C-204ENST00000538492 PIK3C2BO00750 1634 aa32.82■■■□□ 2.84
RAB40C-204ENST00000538492 SENP3Q9H4L4 574 aaPredicted RBP32.81■■■□□ 2.84
RAB40C-204ENST00000538492 CRBNQ96SW2 442 aa32.81■■■□□ 2.84
RAB40C-204ENST00000538492 NSD3Q9BZ95 1437 aa32.81■■■□□ 2.84
RAB40C-204ENST00000538492 APAF1O14727 1248 aa32.8■■■□□ 2.84
RAB40C-204ENST00000538492 CYB5RLQ6IPT4 315 aa32.8■■■□□ 2.84
RAB40C-204ENST00000538492 VGFO15240 615 aaPredicted RBP32.78■■■□□ 2.84
RAB40C-204ENST00000538492 IDI1Q13907 227 aa32.78■■■□□ 2.84
RAB40C-204ENST00000538492 TNNT2P45379 298 aaPredicted RBP32.77■■■□□ 2.84
RAB40C-204ENST00000538492 NEXMIFQ5QGS0 1516 aa32.77■■■□□ 2.84
RAB40C-204ENST00000538492 C20orf194Q5TEA3 1177 aa32.77■■■□□ 2.84
RAB40C-204ENST00000538492 ERICH6Q7L0X2 663 aa32.77■■■□□ 2.84
RAB40C-204ENST00000538492 GLI2P10070 1586 aa32.77■■■□□ 2.84
RAB40C-204ENST00000538492 MORC1Q86VD1 984 aa32.74■■■□□ 2.83
RAB40C-204ENST00000538492 SLFN5Q08AF3 891 aa32.73■■■□□ 2.83
RAB40C-204ENST00000538492 ARHGAP31Q2M1Z3 1444 aa32.73■■■□□ 2.83
RAB40C-204ENST00000538492 SPINK5Q9NQ38 1064 aaPredicted RBP32.71■■■□□ 2.83
RAB40C-204ENST00000538492 SAFB2Q14151 953 aaKnown RBP eCLIP32.7■■■□□ 2.83
RAB40C-204ENST00000538492 ARHGEF28Q8N1W1 1705 aaKnown RBP32.69■■■□□ 2.82
RAB40C-204ENST00000538492 POLR3AO14802 1390 aaPredicted RBP32.68■■■□□ 2.82
RAB40C-204ENST00000538492 MYO5BQ9ULV0 1848 aa32.67■■■□□ 2.82
RAB40C-204ENST00000538492 EVC2Q86UK5 1308 aa32.67■■■□□ 2.82
RAB40C-204ENST00000538492 SLC52A1Q9NWF4 448 aa32.66■■■□□ 2.82
RAB40C-204ENST00000538492 STK26Q9P289 416 aa32.65■■■□□ 2.82
RAB40C-204ENST00000538492 TULP4Q9NRJ4 1543 aa32.65■■■□□ 2.82
RAB40C-204ENST00000538492 TRMT2AQ8IZ69 625 aaKnown RBP32.64■■■□□ 2.82
RAB40C-204ENST00000538492 CABP2Q9NPB3 220 aa32.64■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms