RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 CFAP65Q6ZU64 1925 aaKnown RBP31.34■■■□□ 2.61
HMGA2-206ENST00000536545 PPLO60437 1756 aa31.33■■■□□ 2.61
HMGA2-206ENST00000536545 ARHGEF40Q8TER5 1519 aa31.32■■■□□ 2.6
HMGA2-206ENST00000536545 DISP3Q9P2K9 1392 aa31.3■■■□□ 2.6
HMGA2-206ENST00000536545 ADGRF5Q8IZF2 1346 aa31.28■■■□□ 2.6
HMGA2-206ENST00000536545 PREX1Q8TCU6 1659 aa31.27■■■□□ 2.6
HMGA2-206ENST00000536545 PIK3C2GO75747 1445 aa31.22■■■□□ 2.59
HMGA2-206ENST00000536545 SETBP1Q9Y6X0 1596 aa31.22■■■□□ 2.59
HMGA2-206ENST00000536545 CCDC184Q52MB2 194 aa31.21■■■□□ 2.59
HMGA2-206ENST00000536545 RPGRIP1LQ68CZ1 1315 aa31.21■■■□□ 2.59
HMGA2-206ENST00000536545 EIF3AQ14152 1382 aaKnown RBP31.2■■■□□ 2.58
HMGA2-206ENST00000536545 TMF1P82094 1093 aa31.2■■■□□ 2.58
HMGA2-206ENST00000536545 NEXMIFQ5QGS0 1516 aa31.19■■■□□ 2.58
HMGA2-206ENST00000536545 CHGAP10645 457 aaKnown RBP31.18■■■□□ 2.58
HMGA2-206ENST00000536545 CFAP70Q5T0N1 1121 aa31.17■■■□□ 2.58
HMGA2-206ENST00000536545 MYO3AQ8NEV4 1616 aa31.16■■■□□ 2.58
HMGA2-206ENST00000536545 ERVK-7P63135 1459 aa31.15■■■□□ 2.58
HMGA2-206ENST00000536545 PPP6R1Q9UPN7 881 aa31.15■■■□□ 2.58
HMGA2-206ENST00000536545 MRS2Q9HD23 443 aa31.13■■■□□ 2.57
HMGA2-206ENST00000536545 CLTCQ00610 1675 aaKnown RBP31.13■■■□□ 2.57
HMGA2-206ENST00000536545 KTN1Q86UP2 1357 aaKnown RBP31.13■■■□□ 2.57
HMGA2-206ENST00000536545 ADGRB1O14514 1584 aa31.12■■■□□ 2.57
HMGA2-206ENST00000536545 SLC52A1Q9NWF4 448 aa31.12■■■□□ 2.57
HMGA2-206ENST00000536545 TMEM131LA2VDJ0 1609 aa31.12■■■□□ 2.57
HMGA2-206ENST00000536545 IDI1Q13907 227 aa31.09■■■□□ 2.57
HMGA2-206ENST00000536545 MYO5BQ9ULV0 1848 aa31.07■■■□□ 2.56
HMGA2-206ENST00000536545 SPATA31D1Q6ZQQ2 1576 aa31.06■■■□□ 2.56
HMGA2-206ENST00000536545 ZFYVE9O95405 1425 aa31.06■■■□□ 2.56
HMGA2-206ENST00000536545 C14orf93Q9H972 538 aaKnown RBP31.05■■■□□ 2.56
HMGA2-206ENST00000536545 PER1O15534 1290 aaPredicted RBP31.05■■■□□ 2.56
HMGA2-206ENST00000536545 MYOM1P52179 1685 aa31.04■■■□□ 2.56
HMGA2-206ENST00000536545 KDM5AP29375 1690 aaKnown RBP31.03■■■□□ 2.56
HMGA2-206ENST00000536545 SBNO2Q9Y2G9 1366 aa31.03■■■□□ 2.56
HMGA2-206ENST00000536545 PARD3Q8TEW0 1356 aa31.02■■■□□ 2.56
HMGA2-206ENST00000536545 RALBP1Q15311 655 aa31.02■■■□□ 2.56
HMGA2-206ENST00000536545 CDCA8Q53HL2 280 aa31.02■■■□□ 2.56
HMGA2-206ENST00000536545 HNRNPUQ00839 825 aaKnown RBP eCLIP31.01■■■□□ 2.556e-6■□□□□ 8.3
HMGA2-206ENST00000536545 FBXO31Q5XUX0 539 aaPredicted RBP31■■■□□ 2.55
HMGA2-206ENST00000536545 VGFO15240 615 aaPredicted RBP30.98■■■□□ 2.55
HMGA2-206ENST00000536545 MYBBP1AQ9BQG0 1328 aaKnown RBP30.98■■■□□ 2.55
HMGA2-206ENST00000536545 CNGB1Q14028 1251 aaPredicted RBP30.97■■■□□ 2.55
HMGA2-206ENST00000536545 PANK3Q9H999 370 aa30.97■■■□□ 2.55
HMGA2-206ENST00000536545 BRD4O60885 1362 aaPredicted RBP30.95■■■□□ 2.55
HMGA2-206ENST00000536545 SLC24A1O60721 1099 aa30.95■■■□□ 2.55
HMGA2-206ENST00000536545 FAM9BQ8IZU0 186 aa30.95■■■□□ 2.55
HMGA2-206ENST00000536545 QRICH2Q9H0J4 1663 aa30.94■■■□□ 2.54
HMGA2-206ENST00000536545 CENPJQ9HC77 1338 aaPredicted RBP30.91■■■□□ 2.54
HMGA2-206ENST00000536545 ASXL1Q8IXJ9 1541 aa30.91■■■□□ 2.54
HMGA2-206ENST00000536545 ARHGEF28Q8N1W1 1705 aaKnown RBP30.91■■■□□ 2.54
HMGA2-206ENST00000536545 MLECQ14165 292 aa30.9■■■□□ 2.54
HMGA2-206ENST00000536545 NUTM2DQ5VT03 806 aaPredicted RBP30.89■■■□□ 2.54
HMGA2-206ENST00000536545 A2ML1A8K2U0 1454 aa30.87■■■□□ 2.53
HMGA2-206ENST00000536545 TMEM132EQ6IEE7 984 aa30.85■■■□□ 2.53
HMGA2-206ENST00000536545 PNISRQ8TF01 805 aaKnown RBP30.84■■■□□ 2.53
HMGA2-206ENST00000536545 TRAK1Q9UPV9 953 aa30.84■■■□□ 2.53
HMGA2-206ENST00000536545 ZBED9Q6R2W3 1325 aa30.84■■■□□ 2.53
HMGA2-206ENST00000536545 NLRP13Q86W25 1043 aa30.84■■■□□ 2.53
HMGA2-206ENST00000536545 TMC1Q8TDI8 760 aa30.84■■■□□ 2.53
HMGA2-206ENST00000536545 LRPPRCP42704 1394 aaKnown RBP30.83■■■□□ 2.53
HMGA2-206ENST00000536545 ZMYM3Q14202 1370 aa30.81■■■□□ 2.52
HMGA2-206ENST00000536545 CC2D1BQ5T0F9 858 aaKnown RBP30.79■■■□□ 2.52
HMGA2-206ENST00000536545 NPC1L1Q9UHC9 1359 aa30.78■■■□□ 2.52
HMGA2-206ENST00000536545 ALKQ9UM73 1620 aa30.77■■■□□ 2.52
HMGA2-206ENST00000536545 AMER1Q5JTC6 1135 aaPredicted RBP30.77■■■□□ 2.52
HMGA2-206ENST00000536545 KNSTRNQ9Y448 316 aa30.76■■■□□ 2.51
HMGA2-206ENST00000536545 SUPT16HQ9Y5B9 1047 aaKnown RBP30.76■■■□□ 2.51
HMGA2-206ENST00000536545 ESF1Q9H501 851 aaKnown RBP30.75■■■□□ 2.51
HMGA2-206ENST00000536545 TULP4Q9NRJ4 1543 aa30.75■■■□□ 2.51
HMGA2-206ENST00000536545 RIMS2Q9UQ26 1411 aa30.75■■■□□ 2.51
HMGA2-206ENST00000536545 STAG3Q9UJ98 1225 aa30.74■■■□□ 2.51
HMGA2-206ENST00000536545 PTPRMP28827 1452 aa30.72■■■□□ 2.51
HMGA2-206ENST00000536545 SETD1AO15047 1707 aaKnown RBP30.71■■■□□ 2.51
HMGA2-206ENST00000536545 TNRQ92752 1358 aa30.7■■■□□ 2.5
HMGA2-206ENST00000536545 YTHDC2Q9H6S0 1430 aaKnown RBP30.7■■■□□ 2.5
HMGA2-206ENST00000536545 PUS7Q96PZ0 661 aaKnown RBP30.66■■■□□ 2.5
HMGA2-206ENST00000536545 NRXN3Q9Y4C0 1643 aa30.65■■■□□ 2.5
HMGA2-206ENST00000536545 INSRP06213 1382 aa30.64■■■□□ 2.5
HMGA2-206ENST00000536545 UBR1Q8IWV7 1749 aa30.63■■■□□ 2.49
HMGA2-206ENST00000536545 CARD14Q9BXL6 1004 aa30.62■■■□□ 2.49
HMGA2-206ENST00000536545 EVC2Q86UK5 1308 aa30.62■■■□□ 2.49
HMGA2-206ENST00000536545 USP32Q8NFA0 1604 aa30.61■■■□□ 2.49
HMGA2-206ENST00000536545 DLC1Q96QB1 1528 aa30.61■■■□□ 2.49
HMGA2-206ENST00000536545 PPP2R1AP30153 589 aa30.59■■■□□ 2.49
HMGA2-206ENST00000536545 SENP3Q9H4L4 574 aaPredicted RBP30.59■■■□□ 2.49
HMGA2-206ENST00000536545 STK26Q9P289 416 aa30.59■■■□□ 2.49
HMGA2-206ENST00000536545 BLMP54132 1417 aaPredicted RBP30.57■■■□□ 2.48
HMGA2-206ENST00000536545 TRHP20396 242 aaPredicted RBP30.56■■■□□ 2.48
HMGA2-206ENST00000536545 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.56■■■□□ 2.48
HMGA2-206ENST00000536545 FER1L4A9Z1Z3 1794 aa30.56■■■□□ 2.48
HMGA2-206ENST00000536545 NSD3Q9BZ95 1437 aa30.55■■■□□ 2.48
HMGA2-206ENST00000536545 C3P01024 1663 aa30.55■■■□□ 2.48
HMGA2-206ENST00000536545 NEFLP07196 543 aa30.55■■■□□ 2.48
HMGA2-206ENST00000536545 NLRP1Q9C000 1473 aa30.55■■■□□ 2.48
HMGA2-206ENST00000536545 SMG6Q86US8 1419 aaKnown RBP30.55■■■□□ 2.48
HMGA2-206ENST00000536545 FKBP8Q14318 412 aa30.54■■■□□ 2.48
HMGA2-206ENST00000536545 PRAM1Q96QH2 718 aa30.52■■■□□ 2.48
HMGA2-206ENST00000536545 SLC12A5Q9H2X9 1139 aa30.52■■■□□ 2.48
HMGA2-206ENST00000536545 TMEM2Q9UHN6 1383 aa30.51■■■□□ 2.48
HMGA2-206ENST00000536545 NINLQ9Y2I6 1382 aa30.51■■■□□ 2.47
HMGA2-206ENST00000536545 SAFB2Q14151 953 aaKnown RBP eCLIP30.5■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms