RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 EID1Q9Y6B2 187 aa14.27□□□□□ -0.12
CDCA3-204ENST00000535406 LTKP29376 864 aa14.26□□□□□ -0.13
CDCA3-204ENST00000535406 MYO5BQ9ULV0 1848 aa14.25□□□□□ -0.13
CDCA3-204ENST00000535406 TMEM131LA2VDJ0 1609 aa14.25□□□□□ -0.13
CDCA3-204ENST00000535406 SPHKAPQ2M3C7 1700 aa14.25□□□□□ -0.13
CDCA3-204ENST00000535406 ZBTB22O15209 634 aa14.24□□□□□ -0.13
CDCA3-204ENST00000535406 STRCP1A6NGW2 1772 aa14.22□□□□□ -0.13
CDCA3-204ENST00000535406 ZFYVE9O95405 1425 aa14.21□□□□□ -0.14
CDCA3-204ENST00000535406 RIMS2Q9UQ26 1411 aa14.2□□□□□ -0.14
CDCA3-204ENST00000535406 CHGAP10645 457 aaKnown RBP14.19□□□□□ -0.14
CDCA3-204ENST00000535406 TRIM52Q96A61 297 aa14.18□□□□□ -0.14
CDCA3-204ENST00000535406 TRPM2O94759 1503 aa14.18□□□□□ -0.14
CDCA3-204ENST00000535406 LRRC7Q96NW7 1537 aa14.18□□□□□ -0.14
CDCA3-204ENST00000535406 UBAP1LF5GYI3 381 aa14.17□□□□□ -0.14
CDCA3-204ENST00000535406 PPP1R15AO75807 674 aaPredicted RBP14.17□□□□□ -0.14
CDCA3-204ENST00000535406 HDGFP51858 240 aaKnown RBP14.16□□□□□ -0.14
CDCA3-204ENST00000535406 CLTCL1P53675 1640 aa14.16□□□□□ -0.14
CDCA3-204ENST00000535406 PLEKHG1Q9ULL1 1385 aa14.16□□□□□ -0.14
CDCA3-204ENST00000535406 BCANQ96GW7 911 aa14.15□□□□□ -0.14
CDCA3-204ENST00000535406 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.15□□□□□ -0.15
CDCA3-204ENST00000535406 SLC26A8Q96RN1 970 aa14.15□□□□□ -0.15
CDCA3-204ENST00000535406 NWD1Q149M9 1564 aa14.14□□□□□ -0.15
CDCA3-204ENST00000535406 POTEDQ86YR6 584 aa14.14□□□□□ -0.15
CDCA3-204ENST00000535406 TOM1O60784 492 aa14.13□□□□□ -0.15
CDCA3-204ENST00000535406 KIF1BO60333 1816 aa14.12□□□□□ -0.15
CDCA3-204ENST00000535406 DIP2AQ14689 1571 aa14.12□□□□□ -0.15
CDCA3-204ENST00000535406 NKTRP30414 1462 aaKnown RBP14.12□□□□□ -0.15
CDCA3-204ENST00000535406 XIRP1Q702N8 1843 aaKnown RBP14.11□□□□□ -0.15
CDCA3-204ENST00000535406 NUTM2DQ5VT03 806 aaPredicted RBP14.11□□□□□ -0.15
CDCA3-204ENST00000535406 KCNA6P17658 529 aa14.1□□□□□ -0.15
CDCA3-204ENST00000535406 ZNF326Q5BKZ1 582 aaKnown RBP14.1□□□□□ -0.15
CDCA3-204ENST00000535406 ALKQ9UM73 1620 aa14.1□□□□□ -0.15
CDCA3-204ENST00000535406 PIP4K2BP78356 416 aa14.09□□□□□ -0.15
CDCA3-204ENST00000535406 NEXMIFQ5QGS0 1516 aa14.09□□□□□ -0.15
CDCA3-204ENST00000535406 ADAMTS13Q76LX8 1427 aa14.09□□□□□ -0.15
CDCA3-204ENST00000535406 SETD5Q9C0A6 1442 aa14.09□□□□□ -0.15
CDCA3-204ENST00000535406 CHD2O14647 1828 aaKnown RBP14.08□□□□□ -0.15
CDCA3-204ENST00000535406 SETBP1Q9Y6X0 1596 aa14.08□□□□□ -0.16
CDCA3-204ENST00000535406 TMEM94Q12767 1356 aa14.07□□□□□ -0.16
CDCA3-204ENST00000535406 FOXD4L1Q9NU39 408 aa14.07□□□□□ -0.16
CDCA3-204ENST00000535406 NRXN3Q9Y4C0 1643 aa14.07□□□□□ -0.16
CDCA3-204ENST00000535406 ACIN1Q9UKV3 1341 aaKnown RBP14.07□□□□□ -0.16
CDCA3-204ENST00000535406 TBX22Q9Y458 520 aa14.06□□□□□ -0.16
CDCA3-204ENST00000535406 PIK3R4Q99570 1358 aa14.05□□□□□ -0.16
CDCA3-204ENST00000535406 RAB3GAP2Q9H2M9 1393 aa14.05□□□□□ -0.16
CDCA3-204ENST00000535406 MAPK8IP2Q13387 824 aaPredicted RBP14.05□□□□□ -0.16
CDCA3-204ENST00000535406 PROSER2Q86WR7 435 aaPredicted RBP14.05□□□□□ -0.16
CDCA3-204ENST00000535406 MPHOSPH9Q99550 1183 aa14.05□□□□□ -0.16
CDCA3-204ENST00000535406 RNF216Q9NWF9 866 aaPredicted RBP14.05□□□□□ -0.16
CDCA3-204ENST00000535406 CCDC144AA2RUR9 1427 aa14.04□□□□□ -0.16
CDCA3-204ENST00000535406 RBM33Q96EV2 1170 aaKnown RBP14.02□□□□□ -0.17
CDCA3-204ENST00000535406 PPLO60437 1756 aa14.02□□□□□ -0.17
CDCA3-204ENST00000535406 XRN1Q8IZH2 1706 aaKnown RBP14.01□□□□□ -0.17
CDCA3-204ENST00000535406 HSPA1LP34931 641 aa14.01□□□□□ -0.17
CDCA3-204ENST00000535406 MSH6P52701 1360 aa14.01□□□□□ -0.17
CDCA3-204ENST00000535406 PTPRUQ92729 1446 aa14□□□□□ -0.17
CDCA3-204ENST00000535406 RPGRIP1LQ68CZ1 1315 aa13.99□□□□□ -0.17
CDCA3-204ENST00000535406 NCOA3Q9Y6Q9 1424 aa13.98□□□□□ -0.17
CDCA3-204ENST00000535406 VGFO15240 615 aaPredicted RBP13.98□□□□□ -0.17
CDCA3-204ENST00000535406 SETD1AO15047 1707 aaKnown RBP13.98□□□□□ -0.17
CDCA3-204ENST00000535406 SPATA31E1Q6ZUB1 1445 aa13.97□□□□□ -0.17
CDCA3-204ENST00000535406 METP08581 1390 aa13.97□□□□□ -0.17
CDCA3-204ENST00000535406 AMOTL2Q9Y2J4 779 aa13.97□□□□□ -0.17
CDCA3-204ENST00000535406 IFT172Q9UG01 1749 aa13.97□□□□□ -0.17
CDCA3-204ENST00000535406 ROBO1Q9Y6N7 1651 aa13.97□□□□□ -0.17
CDCA3-204ENST00000535406 C14orf37Q86TY3 774 aa13.96□□□□□ -0.17
CDCA3-204ENST00000535406 FAM135BQ49AJ0 1406 aa13.96□□□□□ -0.18
CDCA3-204ENST00000535406 DISP3Q9P2K9 1392 aa13.96□□□□□ -0.18
CDCA3-204ENST00000535406 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.95□□□□□ -0.18
CDCA3-204ENST00000535406 ANKRD30BQ9BXX2 1392 aa13.94□□□□□ -0.18
CDCA3-204ENST00000535406 RGL3Q3MIN7 710 aa13.93□□□□□ -0.18
CDCA3-204ENST00000535406 HRCP23327 699 aa13.91□□□□□ -0.18
CDCA3-204ENST00000535406 C19orf44Q9H6X5 657 aa13.91□□□□□ -0.18
CDCA3-204ENST00000535406 DCCP43146 1447 aa13.91□□□□□ -0.18
CDCA3-204ENST00000535406 PTCH1Q13635 1447 aa13.91□□□□□ -0.18
CDCA3-204ENST00000535406 MED1Q15648 1581 aaPredicted RBP13.91□□□□□ -0.18
CDCA3-204ENST00000535406 CADPS2Q86UW7 1296 aa13.9□□□□□ -0.18
CDCA3-204ENST00000535406 NALCNQ8IZF0 1738 aa13.9□□□□□ -0.18
CDCA3-204ENST00000535406 SLAIN2Q9P270 581 aa13.9□□□□□ -0.18
CDCA3-204ENST00000535406 ADGRF5Q8IZF2 1346 aa13.9□□□□□ -0.18
CDCA3-204ENST00000535406 PIK3C2GO75747 1445 aa13.9□□□□□ -0.18
CDCA3-204ENST00000535406 PRAG1Q86YV5 1406 aa13.9□□□□□ -0.18
CDCA3-204ENST00000535406 ADGRL3Q9HAR2 1447 aa13.9□□□□□ -0.18
CDCA3-204ENST00000535406 ATF3P18847 181 aa13.9□□□□□ -0.19
CDCA3-204ENST00000535406 PHLPP1O60346 1717 aa13.88□□□□□ -0.19
CDCA3-204ENST00000535406 MYOM2P54296 1465 aa13.88□□□□□ -0.19
CDCA3-204ENST00000535406 ROBO2Q9HCK4 1378 aa13.87□□□□□ -0.19
CDCA3-204ENST00000535406 LAMC1P11047 1609 aa13.86□□□□□ -0.19
CDCA3-204ENST00000535406 ASXL1Q8IXJ9 1541 aa13.86□□□□□ -0.19
CDCA3-204ENST00000535406 NRXN1Q9ULB1 1477 aa13.86□□□□□ -0.19
CDCA3-204ENST00000535406 KNDC1Q76NI1 1749 aa13.85□□□□□ -0.19
CDCA3-204ENST00000535406 AHDC1Q5TGY3 1603 aaPredicted RBP13.85□□□□□ -0.19
CDCA3-204ENST00000535406 MST1RQ04912 1400 aa13.84□□□□□ -0.19
CDCA3-204ENST00000535406 COL16A1Q07092 1604 aaPredicted RBP13.84□□□□□ -0.19
CDCA3-204ENST00000535406 TECPR2O15040 1411 aa13.84□□□□□ -0.19
CDCA3-204ENST00000535406 LRPPRCP42704 1394 aaKnown RBP13.82□□□□□ -0.2
CDCA3-204ENST00000535406 YTHDC2Q9H6S0 1430 aaKnown RBP13.81□□□□□ -0.2
CDCA3-204ENST00000535406 BRINP3Q76B58 766 aa13.81□□□□□ -0.2
CDCA3-204ENST00000535406 CDC42BPGQ6DT37 1551 aa13.8□□□□□ -0.2
CDCA3-204ENST00000535406 NHSL1Q5SYE7 1610 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms