RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 PMFBP1Q8TBY8 1022 aa20.21■□□□□ 0.83
MCF2L-232ENST00000535094 DISP1Q96F81 1524 aa20.2■□□□□ 0.82
MCF2L-232ENST00000535094 TCP11L2Q8N4U5 519 aa20.2■□□□□ 0.82
MCF2L-232ENST00000535094 MBD5Q9P267 1494 aa20.2■□□□□ 0.82
MCF2L-232ENST00000535094 AFAP1Q8N556 730 aa20.2■□□□□ 0.82
MCF2L-232ENST00000535094 SMC4Q9NTJ3 1288 aa20.2■□□□□ 0.82
MCF2L-232ENST00000535094 PNNQ9H307 717 aaKnown RBP20.19■□□□□ 0.82
MCF2L-232ENST00000535094 TRIM44Q96DX7 344 aaPredicted RBP20.19■□□□□ 0.82
MCF2L-232ENST00000535094 RAPGEF6Q8TEU7 1601 aa20.19■□□□□ 0.82
MCF2L-232ENST00000535094 HSCBQ8IWL3 235 aa20.18■□□□□ 0.82
MCF2L-232ENST00000535094 WWC1Q8IX03 1113 aa20.17■□□□□ 0.82
MCF2L-232ENST00000535094 MAGI1Q96QZ7 1491 aaPredicted RBP20.17■□□□□ 0.82
MCF2L-232ENST00000535094 HSP90AB1P08238 724 aaKnown RBP20.17■□□□□ 0.82
MCF2L-232ENST00000535094 EFCAB2Q5VUJ9 269 aa20.16■□□□□ 0.82
MCF2L-232ENST00000535094 NCLP19338 710 aaKnown RBP20.16■□□□□ 0.82
MCF2L-232ENST00000535094 RSPH6AQ9H0K4 717 aa20.16■□□□□ 0.82
MCF2L-232ENST00000535094 SLC12A5Q9H2X9 1139 aa20.16■□□□□ 0.82
MCF2L-232ENST00000535094 SPAG9O60271 1321 aaKnown RBP20.15■□□□□ 0.82
MCF2L-232ENST00000535094 GRIN2AQ12879 1464 aa20.15■□□□□ 0.82
MCF2L-232ENST00000535094 TSR2Q969E8 191 aaKnown RBP20.15■□□□□ 0.82
MCF2L-232ENST00000535094 TMEM132EQ6IEE7 984 aa20.14■□□□□ 0.81
MCF2L-232ENST00000535094 STK26Q9P289 416 aa20.14■□□□□ 0.81
MCF2L-232ENST00000535094 PCDHB15Q9Y5E8 787 aa20.14■□□□□ 0.81
MCF2L-232ENST00000535094 PLEKHH2Q8IVE3 1493 aa20.14■□□□□ 0.81
MCF2L-232ENST00000535094 MTHFSP49914 203 aa20.13■□□□□ 0.81
MCF2L-232ENST00000535094 PDE3AQ14432 1141 aa20.13■□□□□ 0.81
MCF2L-232ENST00000535094 KIAA0556O60303 1618 aa20.13■□□□□ 0.81
MCF2L-232ENST00000535094 TBC1D2Q9BYX2 928 aa20.13■□□□□ 0.81
MCF2L-232ENST00000535094 FAM43AQ8N2R8 423 aa20.12■□□□□ 0.81
MCF2L-232ENST00000535094 MRC2Q9UBG0 1479 aa20.12■□□□□ 0.81
MCF2L-232ENST00000535094 RLBP1P12271 317 aa20.11■□□□□ 0.81
MCF2L-232ENST00000535094 C22orf23Q9BZE7 217 aa20.11■□□□□ 0.81
MCF2L-232ENST00000535094 ADAMTS12P58397 1594 aa20.11■□□□□ 0.81
MCF2L-232ENST00000535094 GGT6Q6P531 493 aa20.11■□□□□ 0.81
MCF2L-232ENST00000535094 PANK2Q9BZ23 570 aa20.1■□□□□ 0.81
MCF2L-232ENST00000535094 NKTRP30414 1462 aaKnown RBP20.1■□□□□ 0.81
MCF2L-232ENST00000535094 ARHGAP5Q13017 1502 aa20.09■□□□□ 0.81
MCF2L-232ENST00000535094 MYH16Q9H6N6 1097 aa20.09■□□□□ 0.81
MCF2L-232ENST00000535094 ELL2O00472 640 aaPredicted RBP20.09■□□□□ 0.81
MCF2L-232ENST00000535094 RUNDC1Q96C34 613 aa20.09■□□□□ 0.81
MCF2L-232ENST00000535094 LNPKQ9C0E8 428 aa20.09■□□□□ 0.81
MCF2L-232ENST00000535094 KIF21AQ7Z4S6 1674 aa20.09■□□□□ 0.81
MCF2L-232ENST00000535094 EIF3AQ14152 1382 aaKnown RBP20.09■□□□□ 0.81
MCF2L-232ENST00000535094 BLMP54132 1417 aaPredicted RBP20.09■□□□□ 0.81
MCF2L-232ENST00000535094 FAM135AQ9P2D6 1515 aa20.09■□□□□ 0.81
MCF2L-232ENST00000535094 ATP10BO94823 1461 aa20.08■□□□□ 0.81
MCF2L-232ENST00000535094 ARHGEF12Q9NZN5 1544 aa20.08■□□□□ 0.81
MCF2L-232ENST00000535094 ZKSCAN2Q63HK3 967 aa20.08■□□□□ 0.81
MCF2L-232ENST00000535094 A2MP01023 1474 aa20.08■□□□□ 0.81
MCF2L-232ENST00000535094 RARSP54136 660 aaKnown RBP20.08■□□□□ 0.8
MCF2L-232ENST00000535094 COL17A1Q9UMD9 1497 aaPredicted RBP20.08■□□□□ 0.8
MCF2L-232ENST00000535094 DZIP1LQ8IYY4 767 aaKnown RBP20.08■□□□□ 0.8
MCF2L-232ENST00000535094 ANP32BQ92688 251 aaKnown RBP20.08■□□□□ 0.8
MCF2L-232ENST00000535094 TRAK2O60296 914 aa20.07■□□□□ 0.8
MCF2L-232ENST00000535094 GLIPR1L2Q4G1C9 344 aa20.07■□□□□ 0.8
MCF2L-232ENST00000535094 TPRNQ4KMQ1 711 aa20.07■□□□□ 0.8
MCF2L-232ENST00000535094 CCDC141Q6ZP82 1450 aa20.07■□□□□ 0.8
MCF2L-232ENST00000535094 IFT140Q96RY7 1462 aa20.07■□□□□ 0.8
MCF2L-232ENST00000535094 APBB1O00213 710 aa20.07■□□□□ 0.8
MCF2L-232ENST00000535094 ADGRL2O95490 1459 aa20.06■□□□□ 0.8
MCF2L-232ENST00000535094 SRPK2P78362 688 aaKnown RBP20.06■□□□□ 0.8
MCF2L-232ENST00000535094 ZMYM4Q5VZL5 1548 aa20.05■□□□□ 0.8
MCF2L-232ENST00000535094 MCM4P33991 863 aa20.05■□□□□ 0.8
MCF2L-232ENST00000535094 CARD14Q9BXL6 1004 aa20.05■□□□□ 0.8
MCF2L-232ENST00000535094 RRAGDQ9NQL2 400 aaPredicted RBP20.04■□□□□ 0.8
MCF2L-232ENST00000535094 CHMP5Q9NZZ3 219 aa20.04■□□□□ 0.8
MCF2L-232ENST00000535094 TARBP1Q13395 1621 aaKnown RBP20.04■□□□□ 0.8
MCF2L-232ENST00000535094 ZBTB7CA1YPR0 619 aa20.04■□□□□ 0.8
MCF2L-232ENST00000535094 EXOSC9Q06265 439 aaKnown RBP20.03■□□□□ 0.8
MCF2L-232ENST00000535094 SYNJ2O15056 1496 aa20.03■□□□□ 0.8
MCF2L-232ENST00000535094 MAGI2Q86UL8 1455 aa20.02■□□□□ 0.8
MCF2L-232ENST00000535094 KANK1Q14678 1352 aa20.02■□□□□ 0.8
MCF2L-232ENST00000535094 ARID3AQ99856 593 aa20.02■□□□□ 0.79
MCF2L-232ENST00000535094 PBRM1Q86U86 1689 aa20.01■□□□□ 0.79
MCF2L-232ENST00000535094 ITSN2Q9NZM3 1697 aa20■□□□□ 0.79
MCF2L-232ENST00000535094 ADGRF5Q8IZF2 1346 aa20■□□□□ 0.79
MCF2L-232ENST00000535094 ANKRD45Q5TZF3 282 aa20■□□□□ 0.79
MCF2L-232ENST00000535094 XRCC6P12956 609 aaKnown RBP eCLIP20■□□□□ 0.79
MCF2L-232ENST00000535094 VSIG10Q8N0Z9 540 aa20■□□□□ 0.79
MCF2L-232ENST00000535094 GGNBP2Q9H3C7 697 aa20■□□□□ 0.79
MCF2L-232ENST00000535094 TBC1D32Q96NH3 1257 aa19.99■□□□□ 0.79
MCF2L-232ENST00000535094 ZNF521Q96K83 1311 aa19.99■□□□□ 0.79
MCF2L-232ENST00000535094 C1orf115Q9H7X2 142 aa19.98■□□□□ 0.79
MCF2L-232ENST00000535094 SLC24A1O60721 1099 aa19.98■□□□□ 0.79
MCF2L-232ENST00000535094 CABP2Q9NPB3 220 aa19.97■□□□□ 0.79
MCF2L-232ENST00000535094 STAG3Q9UJ98 1225 aa19.97■□□□□ 0.79
MCF2L-232ENST00000535094 POLR1AO95602 1720 aaPredicted RBP19.97■□□□□ 0.79
MCF2L-232ENST00000535094 MVPQ14764 893 aaKnown RBP19.97■□□□□ 0.79
MCF2L-232ENST00000535094 USP19O94966 1318 aa19.96■□□□□ 0.79
MCF2L-232ENST00000535094 GOLGA6L22H0YM25 854 aa19.96■□□□□ 0.79
MCF2L-232ENST00000535094 HSP90AA2PQ14568 343 aaPredicted RBP19.96■□□□□ 0.79
MCF2L-232ENST00000535094 NOB1Q9ULX3 412 aaKnown RBP19.95■□□□□ 0.78
MCF2L-232ENST00000535094 FOXD4L5Q5VV16 416 aaPredicted RBP19.94■□□□□ 0.78
MCF2L-232ENST00000535094 FOXD4L4Q8WXT5 416 aaPredicted RBP19.94■□□□□ 0.78
MCF2L-232ENST00000535094 GBP4Q96PP9 640 aa19.94■□□□□ 0.78
MCF2L-232ENST00000535094 GPRASP1Q5JY77 1395 aa19.94■□□□□ 0.78
MCF2L-232ENST00000535094 PLA2R1Q13018 1463 aa19.94■□□□□ 0.78
MCF2L-232ENST00000535094 RIPK4P57078 832 aa19.94■□□□□ 0.78
MCF2L-232ENST00000535094 SYCP2Q9BX26 1530 aa19.93■□□□□ 0.78
MCF2L-232ENST00000535094 NSD3Q9BZ95 1437 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms