RNA–Protein interactions for RNA: ENST00000534400.5

BRPF3-211, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-211ENST00000534400 MSH6P52701 1360 aa13.26□□□□□ -0.29
BRPF3-211ENST00000534400 CLASP1Q7Z460 1538 aa13.26□□□□□ -0.29
BRPF3-211ENST00000534400 CFAP74Q9C0B2 1584 aa13.26□□□□□ -0.29
BRPF3-211ENST00000534400 ZFYVE16Q7Z3T8 1539 aa13.26□□□□□ -0.29
BRPF3-211ENST00000534400 NLRP13Q86W25 1043 aa13.25□□□□□ -0.29
BRPF3-211ENST00000534400 ZNF692Q9BU19 519 aaPredicted RBP13.25□□□□□ -0.29
BRPF3-211ENST00000534400 SAMD9Q5K651 1589 aa13.25□□□□□ -0.29
BRPF3-211ENST00000534400 ABTB2Q8N961 1025 aa13.25□□□□□ -0.29
BRPF3-211ENST00000534400 KTN1Q86UP2 1357 aaKnown RBP13.24□□□□□ -0.29
BRPF3-211ENST00000534400 NAIPQ13075 1403 aa13.24□□□□□ -0.29
BRPF3-211ENST00000534400 NEUROD2Q15784 382 aa13.24□□□□□ -0.29
BRPF3-211ENST00000534400 MAPKBP1O60336 1514 aa13.23□□□□□ -0.29
BRPF3-211ENST00000534400 KDM6BO15054 1643 aa13.22□□□□□ -0.29
BRPF3-211ENST00000534400 ERCC6L2Q5T890 1561 aa13.22□□□□□ -0.29
BRPF3-211ENST00000534400 LRPPRCP42704 1394 aaKnown RBP13.22□□□□□ -0.29
BRPF3-211ENST00000534400 U2AF1L5P0DN76 240 aaPredicted RBP13.22□□□□□ -0.29
BRPF3-211ENST00000534400 U2AF1Q01081 240 aaKnown RBP eCLIP13.22□□□□□ -0.29
BRPF3-211ENST00000534400 PMFBP1Q8TBY8 1022 aa13.22□□□□□ -0.29
BRPF3-211ENST00000534400 LAS1LQ9Y4W2 734 aaKnown RBP13.22□□□□□ -0.29
BRPF3-211ENST00000534400 MAGI3Q5TCQ9 1506 aa13.22□□□□□ -0.29
BRPF3-211ENST00000534400 CALD1Q05682 793 aaKnown RBP13.21□□□□□ -0.29
BRPF3-211ENST00000534400 NCKAP5LQ9HCH0 1330 aa13.21□□□□□ -0.29
BRPF3-211ENST00000534400 PRDM11Q9NQV5 511 aa13.21□□□□□ -0.29
BRPF3-211ENST00000534400 RAPGEF4Q8WZA2 1011 aa13.2□□□□□ -0.3
BRPF3-211ENST00000534400 CCDC61Q9Y6R9 512 aa13.2□□□□□ -0.3
BRPF3-211ENST00000534400 USP47Q96K76 1375 aa13.2□□□□□ -0.3
BRPF3-211ENST00000534400 LMTK3Q96Q04 1460 aa13.2□□□□□ -0.3
BRPF3-211ENST00000534400 CABP2Q9NPB3 220 aa13.19□□□□□ -0.3
BRPF3-211ENST00000534400 TSPOAP1O95153 1857 aa13.19□□□□□ -0.3
BRPF3-211ENST00000534400 HMGB2P26583 209 aaKnown RBP13.19□□□□□ -0.3
BRPF3-211ENST00000534400 RALBP1Q15311 655 aa13.19□□□□□ -0.3
BRPF3-211ENST00000534400 NLRP2Q9NX02 1062 aa13.19□□□□□ -0.3
BRPF3-211ENST00000534400 C1orf141Q5JVX7 400 aa13.18□□□□□ -0.3
BRPF3-211ENST00000534400 DCAF8L1A6NGE4 600 aa13.18□□□□□ -0.3
BRPF3-211ENST00000534400 CDK19Q9BWU1 502 aa13.18□□□□□ -0.3
BRPF3-211ENST00000534400 ATP7AQ04656 1500 aa13.18□□□□□ -0.3
BRPF3-211ENST00000534400 TBX22Q9Y458 520 aa13.17□□□□□ -0.3
BRPF3-211ENST00000534400 C19orf44Q9H6X5 657 aa13.17□□□□□ -0.3
BRPF3-211ENST00000534400 NGLY1Q96IV0 654 aa13.16□□□□□ -0.3
BRPF3-211ENST00000534400 PHF8Q9UPP1 1060 aa13.16□□□□□ -0.3
BRPF3-211ENST00000534400 TMX4Q9H1E5 349 aaPredicted RBP13.16□□□□□ -0.3
BRPF3-211ENST00000534400 ZCCHC11Q5TAX3 1644 aaKnown RBP13.16□□□□□ -0.3
BRPF3-211ENST00000534400 SHANK2Q9UPX8 1470 aa13.16□□□□□ -0.3
BRPF3-211ENST00000534400 LMOD3Q0VAK6 560 aa13.16□□□□□ -0.3
BRPF3-211ENST00000534400 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.15□□□□□ -0.3
BRPF3-211ENST00000534400 YEATS2Q9ULM3 1422 aa13.15□□□□□ -0.3
BRPF3-211ENST00000534400 NUTM2GQ5VZR2 741 aa13.15□□□□□ -0.3
BRPF3-211ENST00000534400 PANK3Q9H999 370 aa13.15□□□□□ -0.3
BRPF3-211ENST00000534400 MYH16Q9H6N6 1097 aa13.15□□□□□ -0.3
BRPF3-211ENST00000534400 RIMS2Q9UQ26 1411 aa13.15□□□□□ -0.31
BRPF3-211ENST00000534400 ATAD2Q6PL18 1390 aa13.14□□□□□ -0.31
BRPF3-211ENST00000534400 STRN4Q9NRL3 753 aa13.14□□□□□ -0.31
BRPF3-211ENST00000534400 MLH3Q9UHC1 1453 aa13.14□□□□□ -0.31
BRPF3-211ENST00000534400 FOXO3O43524 673 aa13.13□□□□□ -0.31
BRPF3-211ENST00000534400 NUDT16Q96DE0 195 aaKnown RBP13.13□□□□□ -0.31
BRPF3-211ENST00000534400 USP35Q9P2H5 1018 aa13.13□□□□□ -0.31
BRPF3-211ENST00000534400 ZNF330Q9Y3S2 320 aaPredicted RBP13.13□□□□□ -0.31
BRPF3-211ENST00000534400 ANP32AP39687 249 aaKnown RBP13.13□□□□□ -0.31
BRPF3-211ENST00000534400 KCNA6P17658 529 aa13.12□□□□□ -0.31
BRPF3-211ENST00000534400 NPHP3Q7Z494 1330 aa13.12□□□□□ -0.31
BRPF3-211ENST00000534400 SYTL4Q96C24 671 aaPredicted RBP13.12□□□□□ -0.31
BRPF3-211ENST00000534400 MSH5O43196 834 aa13.12□□□□□ -0.31
BRPF3-211ENST00000534400 PDE3BQ13370 1112 aa13.12□□□□□ -0.31
BRPF3-211ENST00000534400 KCNH5Q8NCM2 988 aa13.12□□□□□ -0.31
BRPF3-211ENST00000534400 RBM33Q96EV2 1170 aaKnown RBP13.12□□□□□ -0.31
BRPF3-211ENST00000534400 TEFQ10587 303 aa13.11□□□□□ -0.31
BRPF3-211ENST00000534400 WAPLQ7Z5K2 1190 aa13.11□□□□□ -0.31
BRPF3-211ENST00000534400 CABP1Q9NZU7 370 aa13.11□□□□□ -0.31
BRPF3-211ENST00000534400 TOM1L2Q6ZVM7 507 aa13.11□□□□□ -0.31
BRPF3-211ENST00000534400 NBPF1Q3BBV0 1214 aa13.1□□□□□ -0.31
BRPF3-211ENST00000534400 ADAMTS2O95450 1211 aa13.1□□□□□ -0.31
BRPF3-211ENST00000534400 CCDC136Q96JN2 1154 aa13.1□□□□□ -0.31
BRPF3-211ENST00000534400 C14orf93Q9H972 538 aaKnown RBP13.09□□□□□ -0.31
BRPF3-211ENST00000534400 XPCQ01831 940 aaPredicted RBP13.09□□□□□ -0.31
BRPF3-211ENST00000534400 MYO5CQ9NQX4 1742 aa13.09□□□□□ -0.31
BRPF3-211ENST00000534400 NOS1P29475 1434 aa13.09□□□□□ -0.31
BRPF3-211ENST00000534400 TCOF1Q13428 1488 aaKnown RBP13.09□□□□□ -0.31
BRPF3-211ENST00000534400 CHMP4BQ9H444 224 aaKnown RBP13.08□□□□□ -0.31
BRPF3-211ENST00000534400 ADGRF5Q8IZF2 1346 aa13.08□□□□□ -0.31
BRPF3-211ENST00000534400 KRT28Q7Z3Y7 464 aa13.08□□□□□ -0.32
BRPF3-211ENST00000534400 TTC5Q8N0Z6 440 aa13.08□□□□□ -0.32
BRPF3-211ENST00000534400 LRRC59Q96AG4 307 aaKnown RBP13.08□□□□□ -0.32
BRPF3-211ENST00000534400 WASLO00401 505 aaPredicted RBP13.08□□□□□ -0.32
BRPF3-211ENST00000534400 GTF2E1P29083 439 aaPredicted RBP13.08□□□□□ -0.32
BRPF3-211ENST00000534400 DIAPH1O60610 1272 aaKnown RBP13.07□□□□□ -0.32
BRPF3-211ENST00000534400 GGNBP2Q9H3C7 697 aa13.07□□□□□ -0.32
BRPF3-211ENST00000534400 MS4A1P11836 297 aa13.06□□□□□ -0.32
BRPF3-211ENST00000534400 SMG6Q86US8 1419 aaKnown RBP13.06□□□□□ -0.32
BRPF3-211ENST00000534400 TATP17735 454 aaPredicted RBP13.05□□□□□ -0.32
BRPF3-211ENST00000534400 ZC3H6P61129 1189 aaKnown RBP13.05□□□□□ -0.32
BRPF3-211ENST00000534400 ARAP3Q8WWN8 1544 aa13.04□□□□□ -0.32
BRPF3-211ENST00000534400 STK31Q9BXU1 1019 aa13.04□□□□□ -0.32
BRPF3-211ENST00000534400 ADCY10Q96PN6 1610 aa13.04□□□□□ -0.32
BRPF3-211ENST00000534400 NBR1Q14596 966 aa13.04□□□□□ -0.32
BRPF3-211ENST00000534400 TMEM2Q9UHN6 1383 aa13.03□□□□□ -0.32
BRPF3-211ENST00000534400 SLC12A5Q9H2X9 1139 aa13.03□□□□□ -0.32
BRPF3-211ENST00000534400 SUPT16HQ9Y5B9 1047 aaKnown RBP13.03□□□□□ -0.32
BRPF3-211ENST00000534400 FTSJ3Q8IY81 847 aaKnown RBP13.02□□□□□ -0.32
BRPF3-211ENST00000534400 HDAC5Q9UQL6 1122 aa13.02□□□□□ -0.32
BRPF3-211ENST00000534400 PLEKHO1Q53GL0 409 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms