RNA–Protein interactions for RNA: ENST00000533105.1

NDUFS3-210, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 4

Gene NDUFS3, Length 567 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-210ENST00000533105 MYO5BQ9ULV0 1848 aa32.96■■■□□ 2.87
NDUFS3-210ENST00000533105 ZFYVE9O95405 1425 aa32.94■■■□□ 2.86
NDUFS3-210ENST00000533105 LRRC7Q96NW7 1537 aa32.92■■■□□ 2.86
NDUFS3-210ENST00000533105 TOM1O60784 492 aa32.92■■■□□ 2.86
NDUFS3-210ENST00000533105 NUTM2DQ5VT03 806 aaPredicted RBP32.91■■■□□ 2.86
NDUFS3-210ENST00000533105 SCAF1Q9H7N4 1312 aaKnown RBP32.91■■■□□ 2.86
NDUFS3-210ENST00000533105 PIP4K2BP78356 416 aa32.9■■■□□ 2.86
NDUFS3-210ENST00000533105 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.9■■■□□ 2.86
NDUFS3-210ENST00000533105 SPHKAPQ2M3C7 1700 aa32.89■■■□□ 2.86
NDUFS3-210ENST00000533105 PLEKHG1Q9ULL1 1385 aa32.87■■■□□ 2.85
NDUFS3-210ENST00000533105 SLC4A1APQ9BWU0 796 aaKnown RBP32.87■■■□□ 2.85
NDUFS3-210ENST00000533105 KCNA6P17658 529 aa32.85■■■□□ 2.85
NDUFS3-210ENST00000533105 ZNF326Q5BKZ1 582 aaKnown RBP32.82■■■□□ 2.84
NDUFS3-210ENST00000533105 TRPM2O94759 1503 aa32.78■■■□□ 2.84
NDUFS3-210ENST00000533105 CLTCL1P53675 1640 aa32.77■■■□□ 2.84
NDUFS3-210ENST00000533105 PROSER2Q86WR7 435 aaPredicted RBP32.76■■■□□ 2.83
NDUFS3-210ENST00000533105 TBX22Q9Y458 520 aa32.75■■■□□ 2.83
NDUFS3-210ENST00000533105 RBM33Q96EV2 1170 aaKnown RBP32.74■■■□□ 2.83
NDUFS3-210ENST00000533105 TMEM94Q12767 1356 aa32.73■■■□□ 2.83
NDUFS3-210ENST00000533105 FOXD1Q16676 465 aa32.73■■■□□ 2.83
NDUFS3-210ENST00000533105 ALKQ9UM73 1620 aa32.72■■■□□ 2.83
NDUFS3-210ENST00000533105 ADAMTS13Q76LX8 1427 aa32.7■■■□□ 2.83
NDUFS3-210ENST00000533105 HSPA1LP34931 641 aa32.69■■■□□ 2.82
NDUFS3-210ENST00000533105 NWD1Q149M9 1564 aa32.69■■■□□ 2.82
NDUFS3-210ENST00000533105 NKTRP30414 1462 aaKnown RBP32.68■■■□□ 2.82
NDUFS3-210ENST00000533105 XIRP1Q702N8 1843 aaKnown RBP32.68■■■□□ 2.82
NDUFS3-210ENST00000533105 MPHOSPH9Q99550 1183 aa32.68■■■□□ 2.82
NDUFS3-210ENST00000533105 SETD5Q9C0A6 1442 aa32.68■■■□□ 2.82
NDUFS3-210ENST00000533105 KIF1BO60333 1816 aa32.64■■■□□ 2.82
NDUFS3-210ENST00000533105 DIP2AQ14689 1571 aa32.64■■■□□ 2.82
NDUFS3-210ENST00000533105 CHD2O14647 1828 aaKnown RBP32.63■■■□□ 2.81
NDUFS3-210ENST00000533105 NEXMIFQ5QGS0 1516 aa32.61■■■□□ 2.81
NDUFS3-210ENST00000533105 PIK3R4Q99570 1358 aa32.59■■■□□ 2.81
NDUFS3-210ENST00000533105 DISP3Q9P2K9 1392 aa32.58■■■□□ 2.81
NDUFS3-210ENST00000533105 ACIN1Q9UKV3 1341 aaKnown RBP32.58■■■□□ 2.81
NDUFS3-210ENST00000533105 RAB3GAP2Q9H2M9 1393 aa32.57■■■□□ 2.8
NDUFS3-210ENST00000533105 AMOTL2Q9Y2J4 779 aa32.56■■■□□ 2.8
NDUFS3-210ENST00000533105 SETBP1Q9Y6X0 1596 aa32.56■■■□□ 2.8
NDUFS3-210ENST00000533105 MSH6P52701 1360 aa32.56■■■□□ 2.8
NDUFS3-210ENST00000533105 NRXN3Q9Y4C0 1643 aa32.55■■■□□ 2.8
NDUFS3-210ENST00000533105 CCDC144AA2RUR9 1427 aa32.54■■■□□ 2.8
NDUFS3-210ENST00000533105 C14orf37Q86TY3 774 aa32.54■■■□□ 2.8
NDUFS3-210ENST00000533105 VGFO15240 615 aaPredicted RBP32.53■■■□□ 2.8
NDUFS3-210ENST00000533105 RPGRIP1LQ68CZ1 1315 aa32.52■■■□□ 2.8
NDUFS3-210ENST00000533105 PTPRUQ92729 1446 aa32.52■■■□□ 2.8
NDUFS3-210ENST00000533105 METP08581 1390 aa32.49■■■□□ 2.79
NDUFS3-210ENST00000533105 RGL3Q3MIN7 710 aa32.47■■■□□ 2.79
NDUFS3-210ENST00000533105 FAM135BQ49AJ0 1406 aa32.45■■■□□ 2.79
NDUFS3-210ENST00000533105 NCOA3Q9Y6Q9 1424 aa32.45■■■□□ 2.79
NDUFS3-210ENST00000533105 SLAIN2Q9P270 581 aa32.43■■■□□ 2.78
NDUFS3-210ENST00000533105 C19orf44Q9H6X5 657 aa32.41■■■□□ 2.78
NDUFS3-210ENST00000533105 SPATA31E1Q6ZUB1 1445 aa32.39■■■□□ 2.78
NDUFS3-210ENST00000533105 XRN1Q8IZH2 1706 aaKnown RBP32.39■■■□□ 2.78
NDUFS3-210ENST00000533105 PPLO60437 1756 aa32.39■■■□□ 2.78
NDUFS3-210ENST00000533105 ATF3P18847 181 aa32.38■■■□□ 2.77
NDUFS3-210ENST00000533105 ROBO1Q9Y6N7 1651 aa32.37■■■□□ 2.77
NDUFS3-210ENST00000533105 CADPS2Q86UW7 1296 aa32.36■■■□□ 2.77
NDUFS3-210ENST00000533105 ADGRF5Q8IZF2 1346 aa32.34■■■□□ 2.77
NDUFS3-210ENST00000533105 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.33■■■□□ 2.77
NDUFS3-210ENST00000533105 ANKRD30BQ9BXX2 1392 aa32.32■■■□□ 2.76
NDUFS3-210ENST00000533105 HRCP23327 699 aa32.31■■■□□ 2.76
NDUFS3-210ENST00000533105 MED1Q15648 1581 aaPredicted RBP32.29■■■□□ 2.76
NDUFS3-210ENST00000533105 ILDR2Q71H61 639 aa32.28■■■□□ 2.76
NDUFS3-210ENST00000533105 SETD1AO15047 1707 aaKnown RBP32.28■■■□□ 2.76
NDUFS3-210ENST00000533105 DCCP43146 1447 aa32.23■■■□□ 2.75
NDUFS3-210ENST00000533105 IFT172Q9UG01 1749 aa32.23■■■□□ 2.75
NDUFS3-210ENST00000533105 ROBO2Q9HCK4 1378 aa32.22■■■□□ 2.75
NDUFS3-210ENST00000533105 PTCH1Q13635 1447 aa32.22■■■□□ 2.75
NDUFS3-210ENST00000533105 ADGRL3Q9HAR2 1447 aa32.21■■■□□ 2.75
NDUFS3-210ENST00000533105 PHF23Q9BUL5 403 aaPredicted RBP32.19■■■□□ 2.74
NDUFS3-210ENST00000533105 PIK3C2GO75747 1445 aa32.17■■■□□ 2.74
NDUFS3-210ENST00000533105 PHLPP1O60346 1717 aa32.17■■■□□ 2.74
NDUFS3-210ENST00000533105 STK26Q9P289 416 aa32.17■■■□□ 2.74
NDUFS3-210ENST00000533105 TMEM132EQ6IEE7 984 aa32.16■■■□□ 2.74
NDUFS3-210ENST00000533105 BRINP3Q76B58 766 aa32.16■■■□□ 2.74
NDUFS3-210ENST00000533105 MST1RQ04912 1400 aa32.15■■■□□ 2.74
NDUFS3-210ENST00000533105 NALCNQ8IZF0 1738 aa32.14■■■□□ 2.74
NDUFS3-210ENST00000533105 PRAG1Q86YV5 1406 aa32.14■■■□□ 2.74
NDUFS3-210ENST00000533105 MYOM2P54296 1465 aa32.1■■■□□ 2.73
NDUFS3-210ENST00000533105 LRPPRCP42704 1394 aaKnown RBP32.09■■■□□ 2.73
NDUFS3-210ENST00000533105 C14orf93Q9H972 538 aaKnown RBP32.09■■■□□ 2.73
NDUFS3-210ENST00000533105 JCADQ9P266 1359 aa32.08■■■□□ 2.73
NDUFS3-210ENST00000533105 CFAP70Q5T0N1 1121 aa32.08■■■□□ 2.73
NDUFS3-210ENST00000533105 ASXL1Q8IXJ9 1541 aa32.08■■■□□ 2.73
NDUFS3-210ENST00000533105 KDM2AQ9Y2K7 1162 aa32.07■■■□□ 2.72
NDUFS3-210ENST00000533105 NRXN1Q9ULB1 1477 aa32.07■■■□□ 2.72
NDUFS3-210ENST00000533105 COL16A1Q07092 1604 aaPredicted RBP32.07■■■□□ 2.72
NDUFS3-210ENST00000533105 WAPLQ7Z5K2 1190 aa32.06■■■□□ 2.72
NDUFS3-210ENST00000533105 AHDC1Q5TGY3 1603 aaPredicted RBP32.06■■■□□ 2.72
NDUFS3-210ENST00000533105 DCAF11Q8TEB1 546 aa32.05■■■□□ 2.72
NDUFS3-210ENST00000533105 ABCC11Q96J66 1382 aa32.05■■■□□ 2.72
NDUFS3-210ENST00000533105 TECPR2O15040 1411 aa32.04■■■□□ 2.72
NDUFS3-210ENST00000533105 YTHDC2Q9H6S0 1430 aaKnown RBP32.04■■■□□ 2.72
NDUFS3-210ENST00000533105 C1orf167Q5SNV9 1468 aa32.02■■■□□ 2.72
NDUFS3-210ENST00000533105 DHX57Q6P158 1386 aaKnown RBP32■■■□□ 2.71
NDUFS3-210ENST00000533105 DDX17Q92841 729 aaKnown RBP32■■■□□ 2.71
NDUFS3-210ENST00000533105 PLEKHH1Q9ULM0 1364 aa31.99■■■□□ 2.71
NDUFS3-210ENST00000533105 LAMC1P11047 1609 aa31.97■■■□□ 2.71
NDUFS3-210ENST00000533105 ORAI2Q96SN7 254 aa31.97■■■□□ 2.71
NDUFS3-210ENST00000533105 KNDC1Q76NI1 1749 aa31.96■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms