RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 LRP5O75197 1615 aa3.35□□□□□ -1.87
KNL1-211ENST00000533001 FMN1Q68DA7 1419 aa3.35□□□□□ -1.87
KNL1-211ENST00000533001 USP34Q70CQ2 3546 aa3.35□□□□□ -1.87
KNL1-211ENST00000533001 ADGRL2O95490 1459 aa3.35□□□□□ -1.87
KNL1-211ENST00000533001 GCC2Q8IWJ2 1684 aa3.35□□□□□ -1.87
KNL1-211ENST00000533001 CHD9Q3L8U1 2897 aa3.35□□□□□ -1.87
KNL1-211ENST00000533001 RGPD8O14715 1765 aaPredicted RBP3.34□□□□□ -1.87
KNL1-211ENST00000533001 ARHGAP5Q13017 1502 aa3.34□□□□□ -1.87
KNL1-211ENST00000533001 NCKAP5LQ9HCH0 1330 aa3.34□□□□□ -1.87
KNL1-211ENST00000533001 PEAK1Q9H792 1746 aa3.34□□□□□ -1.87
KNL1-211ENST00000533001 TRPM3Q9HCF6 1732 aaPredicted RBP3.34□□□□□ -1.87
KNL1-211ENST00000533001 CUL9Q8IWT3 2517 aa3.34□□□□□ -1.88
KNL1-211ENST00000533001 ADGRB3O60242 1522 aa3.34□□□□□ -1.88
KNL1-211ENST00000533001 C5orf42Q9H799 3197 aa3.34□□□□□ -1.88
KNL1-211ENST00000533001 CDK12Q9NYV4 1490 aaPredicted RBP3.34□□□□□ -1.88
KNL1-211ENST00000533001 NPM1P06748 294 aaKnown RBP eCLIP3.33□□□□□ -1.88
KNL1-211ENST00000533001 P3H3Q8IVL6 736 aa3.33□□□□□ -1.88
KNL1-211ENST00000533001 ABCC5O15440 1437 aa3.33□□□□□ -1.88
KNL1-211ENST00000533001 DISP3Q9P2K9 1392 aa3.33□□□□□ -1.88
KNL1-211ENST00000533001 TRPM2O94759 1503 aa3.33□□□□□ -1.88
KNL1-211ENST00000533001 NEXMIFQ5QGS0 1516 aa3.33□□□□□ -1.88
KNL1-211ENST00000533001 MYOM2P54296 1465 aa3.33□□□□□ -1.88
KNL1-211ENST00000533001 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.33□□□□□ -1.88
KNL1-211ENST00000533001 SBF2Q86WG5 1849 aa3.33□□□□□ -1.88
KNL1-211ENST00000533001 NKTRP30414 1462 aaKnown RBP3.32□□□□□ -1.88
KNL1-211ENST00000533001 RREB1Q92766 1687 aa3.32□□□□□ -1.88
KNL1-211ENST00000533001 CLIP1P30622 1438 aa3.32□□□□□ -1.88
KNL1-211ENST00000533001 ALS2Q96Q42 1657 aa3.32□□□□□ -1.88
KNL1-211ENST00000533001 CCDC18Q5T9S5 1454 aa3.32□□□□□ -1.88
KNL1-211ENST00000533001 PTPN23Q9H3S7 1636 aa3.32□□□□□ -1.88
KNL1-211ENST00000533001 SETD5Q9C0A6 1442 aa3.32□□□□□ -1.88
KNL1-211ENST00000533001 CCDC141Q6ZP82 1450 aa3.31□□□□□ -1.88
KNL1-211ENST00000533001 NPHP4O75161 1426 aaPredicted RBP3.31□□□□□ -1.88
KNL1-211ENST00000533001 LRRC9Q6ZRR7 1453 aa3.31□□□□□ -1.88
KNL1-211ENST00000533001 MST1RQ04912 1400 aa3.31□□□□□ -1.88
KNL1-211ENST00000533001 VPS8Q8N3P4 1428 aa3.31□□□□□ -1.88
KNL1-211ENST00000533001 THSD7AQ9UPZ6 1657 aa3.31□□□□□ -1.88
KNL1-211ENST00000533001 TRANK1O15050 2925 aa3.31□□□□□ -1.88
KNL1-211ENST00000533001 PXDNQ92626 1479 aa3.31□□□□□ -1.88
KNL1-211ENST00000533001 ARID3CA6NKF2 412 aa3.31□□□□□ -1.88
KNL1-211ENST00000533001 PHLPP1O60346 1717 aa3.31□□□□□ -1.88
KNL1-211ENST00000533001 EHBP1L1Q8N3D4 1523 aa3.31□□□□□ -1.88
KNL1-211ENST00000533001 CASZ1Q86V15 1759 aa3.3□□□□□ -1.88
KNL1-211ENST00000533001 PPLO60437 1756 aa3.3□□□□□ -1.88
KNL1-211ENST00000533001 RGS12O14924 1447 aa3.3□□□□□ -1.88
KNL1-211ENST00000533001 CFAP54Q96N23 3096 aa3.3□□□□□ -1.88
KNL1-211ENST00000533001 TMEM2Q9UHN6 1383 aa3.3□□□□□ -1.88
KNL1-211ENST00000533001 COL18A1P39060 1754 aa3.3□□□□□ -1.88
KNL1-211ENST00000533001 PLPPR3Q6T4P5 718 aa3.29□□□□□ -1.88
KNL1-211ENST00000533001 ASPMQ8IZT6 3477 aa3.29□□□□□ -1.88
KNL1-211ENST00000533001 LMO7Q8WWI1 1683 aa3.29□□□□□ -1.88
KNL1-211ENST00000533001 ADGRB1O14514 1584 aa3.29□□□□□ -1.88
KNL1-211ENST00000533001 PKD2Q13563 968 aa3.29□□□□□ -1.88
KNL1-211ENST00000533001 KANK4Q5T7N3 995 aaPredicted RBP3.29□□□□□ -1.88
KNL1-211ENST00000533001 CLTCL1P53675 1640 aa3.29□□□□□ -1.88
KNL1-211ENST00000533001 NUP188Q5SRE5 1749 aa3.29□□□□□ -1.88
KNL1-211ENST00000533001 EFCAB2Q5VUJ9 269 aa3.29□□□□□ -1.88
KNL1-211ENST00000533001 TECPR2O15040 1411 aa3.28□□□□□ -1.88
KNL1-211ENST00000533001 FGD6Q6ZV73 1430 aa3.28□□□□□ -1.88
KNL1-211ENST00000533001 SLIT2O94813 1529 aa3.28□□□□□ -1.88
KNL1-211ENST00000533001 PAPPAQ13219 1627 aa3.28□□□□□ -1.88
KNL1-211ENST00000533001 NRXN1Q9ULB1 1477 aa3.28□□□□□ -1.88
KNL1-211ENST00000533001 KNDC1Q76NI1 1749 aa3.28□□□□□ -1.88
KNL1-211ENST00000533001 HNRNPMP52272 730 aaKnown RBP eCLIP3.28□□□□□ -1.89
KNL1-211ENST00000533001 NCOA3Q9Y6Q9 1424 aa3.27□□□□□ -1.89
KNL1-211ENST00000533001 SPEGQ15772 3267 aa3.27□□□□□ -1.89
KNL1-211ENST00000533001 TNRQ92752 1358 aa3.27□□□□□ -1.89
KNL1-211ENST00000533001 KIAA1551Q9HCM1 1747 aa3.27□□□□□ -1.89
KNL1-211ENST00000533001 UPF1Q92900 1129 aaKnown RBP eCLIP3.27□□□□□ -1.89
KNL1-211ENST00000533001 RPRD2Q5VT52 1461 aaKnown RBP3.27□□□□□ -1.89
KNL1-211ENST00000533001 DUOX2Q9NRD8 1548 aa3.27□□□□□ -1.89
KNL1-211ENST00000533001 NWD2Q9ULI1 1742 aa3.27□□□□□ -1.89
KNL1-211ENST00000533001 TMEM94Q12767 1356 aa3.27□□□□□ -1.89
KNL1-211ENST00000533001 IDI1Q13907 227 aa3.27□□□□□ -1.89
KNL1-211ENST00000533001 ONECUT3O60422 494 aaPredicted RBP3.26□□□□□ -1.89
KNL1-211ENST00000533001 PPP6R1Q9UPN7 881 aa3.26□□□□□ -1.89
KNL1-211ENST00000533001 RGPD3A6NKT7 1758 aaPredicted RBP3.26□□□□□ -1.89
KNL1-211ENST00000533001 RGPD4Q7Z3J3 1758 aa3.26□□□□□ -1.89
KNL1-211ENST00000533001 FMN2Q9NZ56 1722 aa3.26□□□□□ -1.89
KNL1-211ENST00000533001 PHRF1Q9P1Y6 1649 aaKnown RBP3.26□□□□□ -1.89
KNL1-211ENST00000533001 TUBGCP6Q96RT7 1819 aa3.26□□□□□ -1.89
KNL1-211ENST00000533001 PLCH1Q4KWH8 1693 aa3.26□□□□□ -1.89
KNL1-211ENST00000533001 PLEKHD1A6NEE1 506 aa3.26□□□□□ -1.89
KNL1-211ENST00000533001 ATRNO75882 1429 aa3.26□□□□□ -1.89
KNL1-211ENST00000533001 METP08581 1390 aa3.26□□□□□ -1.89
KNL1-211ENST00000533001 ZFHX4Q86UP3 3567 aa3.26□□□□□ -1.89
KNL1-211ENST00000533001 DCCP43146 1447 aa3.26□□□□□ -1.89
KNL1-211ENST00000533001 ERBINQ96RT1 1412 aa3.26□□□□□ -1.89
KNL1-211ENST00000533001 SHANK3Q9BYB0 1731 aa3.26□□□□□ -1.89
KNL1-211ENST00000533001 DISP2A7MBM2 1401 aa3.25□□□□□ -1.89
KNL1-211ENST00000533001 SPATA31E1Q6ZUB1 1445 aa3.25□□□□□ -1.89
KNL1-211ENST00000533001 ZZEF1O43149 2961 aa3.25□□□□□ -1.89
KNL1-211ENST00000533001 TOPAZ1Q8N9V7 1692 aa3.25□□□□□ -1.89
KNL1-211ENST00000533001 CDC42BPGQ6DT37 1551 aa3.25□□□□□ -1.89
KNL1-211ENST00000533001 CAMTA1Q9Y6Y1 1673 aa3.25□□□□□ -1.89
KNL1-211ENST00000533001 LOC400499M0QZD8 3231 aa3.25□□□□□ -1.89
KNL1-211ENST00000533001 WNK3Q9BYP7 1800 aa3.25□□□□□ -1.89
KNL1-211ENST00000533001 USP54Q70EL1 1684 aa3.24□□□□□ -1.89
KNL1-211ENST00000533001 CFAP47Q6ZTR5 3102 aa3.24□□□□□ -1.89
KNL1-211ENST00000533001 DAPK1P53355 1430 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms