RNA–Protein interactions for RNA: ENST00000532442.5

MS4A4E-207, Transcript of membrane spanning 4-domains A4E, humanhuman

TSL 2

Gene MS4A4E, Length 1,125 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4E-207ENST00000532442 SCAF11Q99590 1463 aaKnown RBP22.48■■□□□ 1.19
MS4A4E-207ENST00000532442 STAC3Q96MF2 364 aa22.48■■□□□ 1.19
MS4A4E-207ENST00000532442 NEXMIFQ5QGS0 1516 aa22.47■■□□□ 1.19
MS4A4E-207ENST00000532442 POLR1AO95602 1720 aaPredicted RBP22.46■■□□□ 1.19
MS4A4E-207ENST00000532442 ZNF326Q5BKZ1 582 aaKnown RBP22.46■■□□□ 1.19
MS4A4E-207ENST00000532442 STRCQ7RTU9 1775 aa22.45■■□□□ 1.19
MS4A4E-207ENST00000532442 TXNDC2Q86VQ3 553 aa22.45■■□□□ 1.18
MS4A4E-207ENST00000532442 LTKP29376 864 aa22.44■■□□□ 1.18
MS4A4E-207ENST00000532442 CCER1Q8TC90 406 aaPredicted RBP22.44■■□□□ 1.18
MS4A4E-207ENST00000532442 DMRT2Q9Y5R5 561 aa22.44■■□□□ 1.18
MS4A4E-207ENST00000532442 PPLO60437 1756 aa22.43■■□□□ 1.18
MS4A4E-207ENST00000532442 VGFO15240 615 aaPredicted RBP22.43■■□□□ 1.18
MS4A4E-207ENST00000532442 PLEKHG1Q9ULL1 1385 aa22.42■■□□□ 1.18
MS4A4E-207ENST00000532442 SIN3AQ96ST3 1273 aa22.42■■□□□ 1.18
MS4A4E-207ENST00000532442 IFT172Q9UG01 1749 aa22.42■■□□□ 1.18
MS4A4E-207ENST00000532442 RGL3Q3MIN7 710 aa22.41■■□□□ 1.18
MS4A4E-207ENST00000532442 MYOM2P54296 1465 aa22.41■■□□□ 1.18
MS4A4E-207ENST00000532442 NPHP4O75161 1426 aaPredicted RBP22.4■■□□□ 1.18
MS4A4E-207ENST00000532442 NCKAP5LQ9HCH0 1330 aa22.4■■□□□ 1.18
MS4A4E-207ENST00000532442 PPP1R15AO75807 674 aaPredicted RBP22.39■■□□□ 1.17
MS4A4E-207ENST00000532442 TIMELESSQ9UNS1 1208 aa22.38■■□□□ 1.17
MS4A4E-207ENST00000532442 ILDR1Q86SU0 546 aaPredicted RBP22.37■■□□□ 1.17
MS4A4E-207ENST00000532442 IQGAP1P46940 1657 aa22.36■■□□□ 1.17
MS4A4E-207ENST00000532442 NRXN1Q9ULB1 1477 aa22.36■■□□□ 1.17
MS4A4E-207ENST00000532442 NEUROD1Q13562 356 aa22.36■■□□□ 1.17
MS4A4E-207ENST00000532442 SETBP1Q9Y6X0 1596 aa22.36■■□□□ 1.17
MS4A4E-207ENST00000532442 DCAF11Q8TEB1 546 aa22.33■■□□□ 1.17
MS4A4E-207ENST00000532442 TONSLQ96HA7 1378 aa22.33■■□□□ 1.17
MS4A4E-207ENST00000532442 DIP2AQ14689 1571 aa22.33■■□□□ 1.16
MS4A4E-207ENST00000532442 L3MBTL2Q969R5 705 aa22.32■■□□□ 1.16
MS4A4E-207ENST00000532442 PIK3C2GO75747 1445 aa22.31■■□□□ 1.16
MS4A4E-207ENST00000532442 TBX22Q9Y458 520 aa22.31■■□□□ 1.16
MS4A4E-207ENST00000532442 ADAMTS13Q76LX8 1427 aa22.31■■□□□ 1.16
MS4A4E-207ENST00000532442 ADGRF5Q8IZF2 1346 aa22.31■■□□□ 1.16
MS4A4E-207ENST00000532442 NUTM2DQ5VT03 806 aaPredicted RBP22.3■■□□□ 1.16
MS4A4E-207ENST00000532442 NRXN3Q9Y4C0 1643 aa22.29■■□□□ 1.16
MS4A4E-207ENST00000532442 PIK3R4Q99570 1358 aa22.28■■□□□ 1.16
MS4A4E-207ENST00000532442 LAMC1P11047 1609 aa22.26■■□□□ 1.15
MS4A4E-207ENST00000532442 BCANQ96GW7 911 aa22.25■■□□□ 1.15
MS4A4E-207ENST00000532442 PRAG1Q86YV5 1406 aa22.24■■□□□ 1.15
MS4A4E-207ENST00000532442 KDM2AQ9Y2K7 1162 aa22.24■■□□□ 1.15
MS4A4E-207ENST00000532442 ALKQ9UM73 1620 aa22.24■■□□□ 1.15
MS4A4E-207ENST00000532442 SLC26A8Q96RN1 970 aa22.23■■□□□ 1.15
MS4A4E-207ENST00000532442 C14orf93Q9H972 538 aaKnown RBP22.23■■□□□ 1.15
MS4A4E-207ENST00000532442 SETD1AO15047 1707 aaKnown RBP22.22■■□□□ 1.15
MS4A4E-207ENST00000532442 KIAA1210Q9ULL0 1709 aa22.21■■□□□ 1.15
MS4A4E-207ENST00000532442 KCNA6P17658 529 aa22.17■■□□□ 1.14
MS4A4E-207ENST00000532442 NWD1Q149M9 1564 aa22.16■■□□□ 1.14
MS4A4E-207ENST00000532442 METP08581 1390 aa22.16■■□□□ 1.14
MS4A4E-207ENST00000532442 CHD2O14647 1828 aaKnown RBP22.16■■□□□ 1.14
MS4A4E-207ENST00000532442 CFAP70Q5T0N1 1121 aa22.15■■□□□ 1.14
MS4A4E-207ENST00000532442 NKTRP30414 1462 aaKnown RBP22.14■■□□□ 1.13
MS4A4E-207ENST00000532442 ADGRB1O14514 1584 aa22.13■■□□□ 1.13
MS4A4E-207ENST00000532442 CPS1P31327 1500 aa22.13■■□□□ 1.13
MS4A4E-207ENST00000532442 ZNF335Q9H4Z2 1342 aaPredicted RBP22.12■■□□□ 1.13
MS4A4E-207ENST00000532442 ASXL1Q8IXJ9 1541 aa22.12■■□□□ 1.13
MS4A4E-207ENST00000532442 LRPPRCP42704 1394 aaKnown RBP22.12■■□□□ 1.13
MS4A4E-207ENST00000532442 XRN1Q8IZH2 1706 aaKnown RBP22.11■■□□□ 1.13
MS4A4E-207ENST00000532442 TRPM1Q7Z4N2 1603 aa22.11■■□□□ 1.13
MS4A4E-207ENST00000532442 FBXO41Q8TF61 875 aa22.11■■□□□ 1.13
MS4A4E-207ENST00000532442 SENP3Q9H4L4 574 aaPredicted RBP22.11■■□□□ 1.13
MS4A4E-207ENST00000532442 TECPR2O15040 1411 aa22.11■■□□□ 1.13
MS4A4E-207ENST00000532442 PTPRUQ92729 1446 aa22.11■■□□□ 1.13
MS4A4E-207ENST00000532442 ABCC11Q96J66 1382 aa22.11■■□□□ 1.13
MS4A4E-207ENST00000532442 LTBP4Q8N2S1 1624 aa22.1■■□□□ 1.13
MS4A4E-207ENST00000532442 NBPF8Q3BBV2 869 aa22.1■■□□□ 1.13
MS4A4E-207ENST00000532442 RALGAPBQ86X10 1494 aa22.09■■□□□ 1.13
MS4A4E-207ENST00000532442 PTCH1Q13635 1447 aa22.09■■□□□ 1.13
MS4A4E-207ENST00000532442 YTHDC2Q9H6S0 1430 aaKnown RBP22.09■■□□□ 1.13
MS4A4E-207ENST00000532442 AMOTL2Q9Y2J4 779 aa22.09■■□□□ 1.13
MS4A4E-207ENST00000532442 GPRASP1Q5JY77 1395 aa22.09■■□□□ 1.13
MS4A4E-207ENST00000532442 SIRT1Q96EB6 747 aa22.08■■□□□ 1.13
MS4A4E-207ENST00000532442 STRCP1A6NGW2 1772 aa22.07■■□□□ 1.12
MS4A4E-207ENST00000532442 KNDC1Q76NI1 1749 aa22.07■■□□□ 1.12
MS4A4E-207ENST00000532442 TMEM132EQ6IEE7 984 aa22.06■■□□□ 1.12
MS4A4E-207ENST00000532442 DLC1Q96QB1 1528 aa22.06■■□□□ 1.12
MS4A4E-207ENST00000532442 NCOA3Q9Y6Q9 1424 aa22.06■■□□□ 1.12
MS4A4E-207ENST00000532442 NBPF1Q3BBV0 1214 aa22.04■■□□□ 1.12
MS4A4E-207ENST00000532442 FAM135BQ49AJ0 1406 aa22.04■■□□□ 1.12
MS4A4E-207ENST00000532442 ROCK2O75116 1388 aaKnown RBP22.03■■□□□ 1.12
MS4A4E-207ENST00000532442 LRRC7Q96NW7 1537 aa22.02■■□□□ 1.12
MS4A4E-207ENST00000532442 IQSEC2Q5JU85 1478 aa22.02■■□□□ 1.12
MS4A4E-207ENST00000532442 ROBO2Q9HCK4 1378 aa22■■□□□ 1.11
MS4A4E-207ENST00000532442 PROSER2Q86WR7 435 aaPredicted RBP21.99■■□□□ 1.11
MS4A4E-207ENST00000532442 STK26Q9P289 416 aa21.98■■□□□ 1.11
MS4A4E-207ENST00000532442 TMEM94Q12767 1356 aa21.97■■□□□ 1.11
MS4A4E-207ENST00000532442 ZEB1P37275 1124 aaPredicted RBP21.96■■□□□ 1.11
MS4A4E-207ENST00000532442 CARD11Q9BXL7 1154 aa21.96■■□□□ 1.11
MS4A4E-207ENST00000532442 TRAK1Q9UPV9 953 aa21.95■■□□□ 1.1
MS4A4E-207ENST00000532442 ARHGEF28Q8N1W1 1705 aaKnown RBP21.94■■□□□ 1.1
MS4A4E-207ENST00000532442 EIF3AQ14152 1382 aaKnown RBP21.94■■□□□ 1.1
MS4A4E-207ENST00000532442 CERKQ8TCT0 537 aa21.93■■□□□ 1.1
MS4A4E-207ENST00000532442 XIRP1Q702N8 1843 aaKnown RBP21.92■■□□□ 1.1
MS4A4E-207ENST00000532442 DCCP43146 1447 aa21.91■■□□□ 1.1
MS4A4E-207ENST00000532442 ADGRL3Q9HAR2 1447 aa21.91■■□□□ 1.1
MS4A4E-207ENST00000532442 PRAM1Q96QH2 718 aa21.91■■□□□ 1.1
MS4A4E-207ENST00000532442 C19orf44Q9H6X5 657 aa21.9■■□□□ 1.1
MS4A4E-207ENST00000532442 POGKQ9P215 609 aa21.9■■□□□ 1.1
MS4A4E-207ENST00000532442 WAPLQ7Z5K2 1190 aa21.89■■□□□ 1.09
MS4A4E-207ENST00000532442 MSH6P52701 1360 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms