RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 RIMS2Q9UQ26 1411 aa27.96■■■□□ 2.07
GMDS-208ENST00000530927 STRCP1A6NGW2 1772 aa27.94■■■□□ 2.06
GMDS-208ENST00000530927 FBXO41Q8TF61 875 aa27.94■■■□□ 2.06
GMDS-208ENST00000530927 MPHOSPH9Q99550 1183 aa27.93■■■□□ 2.06
GMDS-208ENST00000530927 SLC26A8Q96RN1 970 aa27.9■■■□□ 2.06
GMDS-208ENST00000530927 PPP1R15AO75807 674 aaPredicted RBP27.86■■■□□ 2.05
GMDS-208ENST00000530927 BCANQ96GW7 911 aa27.85■■■□□ 2.05
GMDS-208ENST00000530927 ZNF326Q5BKZ1 582 aaKnown RBP27.84■■■□□ 2.05
GMDS-208ENST00000530927 KIF1BO60333 1816 aa27.84■■■□□ 2.05
GMDS-208ENST00000530927 CPS1P31327 1500 aa27.84■■■□□ 2.05
GMDS-208ENST00000530927 PLEKHG1Q9ULL1 1385 aa27.84■■■□□ 2.05
GMDS-208ENST00000530927 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.79■■■□□ 2.04
GMDS-208ENST00000530927 NEXMIFQ5QGS0 1516 aa27.79■■■□□ 2.04
GMDS-208ENST00000530927 IQSEC2Q5JU85 1478 aa27.79■■■□□ 2.04
GMDS-208ENST00000530927 LRRC7Q96NW7 1537 aa27.78■■■□□ 2.04
GMDS-208ENST00000530927 HDGFP51858 240 aaKnown RBP27.77■■■□□ 2.04
GMDS-208ENST00000530927 ADAMTS13Q76LX8 1427 aa27.77■■■□□ 2.04
GMDS-208ENST00000530927 CCDC144AA2RUR9 1427 aa27.74■■■□□ 2.03
GMDS-208ENST00000530927 NRXN3Q9Y4C0 1643 aa27.74■■■□□ 2.03
GMDS-208ENST00000530927 RBM33Q96EV2 1170 aaKnown RBP27.71■■■□□ 2.03
GMDS-208ENST00000530927 XIRP1Q702N8 1843 aaKnown RBP27.7■■■□□ 2.03
GMDS-208ENST00000530927 UBAP1LF5GYI3 381 aa27.7■■■□□ 2.03
GMDS-208ENST00000530927 ACIN1Q9UKV3 1341 aaKnown RBP27.7■■■□□ 2.02
GMDS-208ENST00000530927 KCNA6P17658 529 aa27.69■■■□□ 2.02
GMDS-208ENST00000530927 NWD1Q149M9 1564 aa27.69■■■□□ 2.02
GMDS-208ENST00000530927 SETBP1Q9Y6X0 1596 aa27.68■■■□□ 2.02
GMDS-208ENST00000530927 SPATA31E1Q6ZUB1 1445 aa27.68■■■□□ 2.02
GMDS-208ENST00000530927 RGL3Q3MIN7 710 aa27.67■■■□□ 2.02
GMDS-208ENST00000530927 TBX22Q9Y458 520 aa27.67■■■□□ 2.02
GMDS-208ENST00000530927 CHD2O14647 1828 aaKnown RBP27.67■■■□□ 2.02
GMDS-208ENST00000530927 PPLO60437 1756 aa27.67■■■□□ 2.02
GMDS-208ENST00000530927 HRCP23327 699 aa27.67■■■□□ 2.02
GMDS-208ENST00000530927 ALKQ9UM73 1620 aa27.66■■■□□ 2.02
GMDS-208ENST00000530927 DIP2AQ14689 1571 aa27.65■■■□□ 2.02
GMDS-208ENST00000530927 PTPRUQ92729 1446 aa27.64■■■□□ 2.01
GMDS-208ENST00000530927 TMEM94Q12767 1356 aa27.62■■■□□ 2.01
GMDS-208ENST00000530927 ANKRD30BQ9BXX2 1392 aa27.62■■■□□ 2.01
GMDS-208ENST00000530927 PROSER2Q86WR7 435 aaPredicted RBP27.61■■■□□ 2.01
GMDS-208ENST00000530927 NKTRP30414 1462 aaKnown RBP27.6■■■□□ 2.01
GMDS-208ENST00000530927 METP08581 1390 aa27.6■■■□□ 2.01
GMDS-208ENST00000530927 IFT172Q9UG01 1749 aa27.6■■■□□ 2.01
GMDS-208ENST00000530927 RPGRIP1LQ68CZ1 1315 aa27.59■■■□□ 2.01
GMDS-208ENST00000530927 PIP4K2BP78356 416 aa27.58■■■□□ 2.01
GMDS-208ENST00000530927 ADGRF5Q8IZF2 1346 aa27.57■■■□□ 2
GMDS-208ENST00000530927 SCAF1Q9H7N4 1312 aaKnown RBP27.57■■■□□ 2
GMDS-208ENST00000530927 VGFO15240 615 aaPredicted RBP27.57■■■□□ 2
GMDS-208ENST00000530927 SETD1AO15047 1707 aaKnown RBP27.56■■■□□ 2
GMDS-208ENST00000530927 PIK3R4Q99570 1358 aa27.54■■■□□ 2
GMDS-208ENST00000530927 AMOTL2Q9Y2J4 779 aa27.54■■■□□ 2
GMDS-208ENST00000530927 TOM1O60784 492 aa27.53■■■□□ 2
GMDS-208ENST00000530927 XRN1Q8IZH2 1706 aaKnown RBP27.53■■■□□ 2
GMDS-208ENST00000530927 TRIM26Q12899 539 aaPredicted RBP27.5■■□□□ 1.99
GMDS-208ENST00000530927 PIK3C2GO75747 1445 aa27.44■■□□□ 1.98
GMDS-208ENST00000530927 MSH6P52701 1360 aa27.42■■□□□ 1.98
GMDS-208ENST00000530927 ASXL1Q8IXJ9 1541 aa27.42■■□□□ 1.98
GMDS-208ENST00000530927 HSPA1LP34931 641 aa27.41■■□□□ 1.98
GMDS-208ENST00000530927 C14orf37Q86TY3 774 aa27.41■■□□□ 1.98
GMDS-208ENST00000530927 MYOM2P54296 1465 aa27.39■■□□□ 1.98
GMDS-208ENST00000530927 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.39■■□□□ 1.98
GMDS-208ENST00000530927 NRXN1Q9ULB1 1477 aa27.39■■□□□ 1.97
GMDS-208ENST00000530927 TMEM132EQ6IEE7 984 aa27.38■■□□□ 1.97
GMDS-208ENST00000530927 ROBO2Q9HCK4 1378 aa27.38■■□□□ 1.97
GMDS-208ENST00000530927 KDM2AQ9Y2K7 1162 aa27.38■■□□□ 1.97
GMDS-208ENST00000530927 DHX57Q6P158 1386 aaKnown RBP27.37■■□□□ 1.97
GMDS-208ENST00000530927 DCAF11Q8TEB1 546 aa27.35■■□□□ 1.97
GMDS-208ENST00000530927 NCOA3Q9Y6Q9 1424 aa27.35■■□□□ 1.97
GMDS-208ENST00000530927 CFAP70Q5T0N1 1121 aa27.34■■□□□ 1.97
GMDS-208ENST00000530927 NALCNQ8IZF0 1738 aa27.34■■□□□ 1.97
GMDS-208ENST00000530927 STK26Q9P289 416 aa27.33■■□□□ 1.97
GMDS-208ENST00000530927 ROBO1Q9Y6N7 1651 aa27.33■■□□□ 1.97
GMDS-208ENST00000530927 PTCH1Q13635 1447 aa27.31■■□□□ 1.96
GMDS-208ENST00000530927 SIN3AQ96ST3 1273 aa27.31■■□□□ 1.96
GMDS-208ENST00000530927 C19orf44Q9H6X5 657 aa27.31■■□□□ 1.96
GMDS-208ENST00000530927 C14orf93Q9H972 538 aaKnown RBP27.31■■□□□ 1.96
GMDS-208ENST00000530927 SLAIN2Q9P270 581 aa27.3■■□□□ 1.96
GMDS-208ENST00000530927 PRAG1Q86YV5 1406 aa27.28■■□□□ 1.96
GMDS-208ENST00000530927 FAM135BQ49AJ0 1406 aa27.27■■□□□ 1.96
GMDS-208ENST00000530927 ADGRL3Q9HAR2 1447 aa27.27■■□□□ 1.96
GMDS-208ENST00000530927 LRPPRCP42704 1394 aaKnown RBP27.26■■□□□ 1.95
GMDS-208ENST00000530927 ATF3P18847 181 aa27.26■■□□□ 1.95
GMDS-208ENST00000530927 LAMC1P11047 1609 aa27.26■■□□□ 1.95
GMDS-208ENST00000530927 YTHDC2Q9H6S0 1430 aaKnown RBP27.26■■□□□ 1.95
GMDS-208ENST00000530927 WAPLQ7Z5K2 1190 aa27.25■■□□□ 1.95
GMDS-208ENST00000530927 PLEKHH1Q9ULM0 1364 aa27.25■■□□□ 1.95
GMDS-208ENST00000530927 KNDC1Q76NI1 1749 aa27.24■■□□□ 1.95
GMDS-208ENST00000530927 CADPS2Q86UW7 1296 aa27.24■■□□□ 1.95
GMDS-208ENST00000530927 TECPR2O15040 1411 aa27.23■■□□□ 1.95
GMDS-208ENST00000530927 NEUROD1Q13562 356 aa27.23■■□□□ 1.95
GMDS-208ENST00000530927 ABCC11Q96J66 1382 aa27.21■■□□□ 1.95
GMDS-208ENST00000530927 ADGRB1O14514 1584 aa27.21■■□□□ 1.95
GMDS-208ENST00000530927 DCCP43146 1447 aa27.21■■□□□ 1.95
GMDS-208ENST00000530927 MST1RQ04912 1400 aa27.2■■□□□ 1.95
GMDS-208ENST00000530927 L3MBTL2Q969R5 705 aa27.16■■□□□ 1.94
GMDS-208ENST00000530927 PCGF6Q9BYE7 350 aa27.16■■□□□ 1.94
GMDS-208ENST00000530927 BRINP3Q76B58 766 aa27.15■■□□□ 1.94
GMDS-208ENST00000530927 PHLPP1O60346 1717 aa27.14■■□□□ 1.94
GMDS-208ENST00000530927 SAFB2Q14151 953 aaKnown RBP eCLIP27.13■■□□□ 1.93
GMDS-208ENST00000530927 TRAK1Q9UPV9 953 aa27.12■■□□□ 1.93
GMDS-208ENST00000530927 STAC3Q96MF2 364 aa27.11■■□□□ 1.93
GMDS-208ENST00000530927 PRAM1Q96QH2 718 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms