RNA–Protein interactions for RNA: ENST00000530746.1

PPFIA1-216, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-216ENST00000530746 ACIN1Q9UKV3 1341 aaKnown RBP22.31■■□□□ 1.16
PPFIA1-216ENST00000530746 STRCP1A6NGW2 1772 aa22.3■■□□□ 1.16
PPFIA1-216ENST00000530746 KIF1BO60333 1816 aa22.29■■□□□ 1.16
PPFIA1-216ENST00000530746 HDGFP51858 240 aaKnown RBP22.29■■□□□ 1.16
PPFIA1-216ENST00000530746 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.26■■□□□ 1.15
PPFIA1-216ENST00000530746 RAB3GAP2Q9H2M9 1393 aa22.25■■□□□ 1.15
PPFIA1-216ENST00000530746 PPP1R15AO75807 674 aaPredicted RBP22.25■■□□□ 1.15
PPFIA1-216ENST00000530746 MPHOSPH9Q99550 1183 aa22.25■■□□□ 1.15
PPFIA1-216ENST00000530746 PLEKHG1Q9ULL1 1385 aa22.25■■□□□ 1.15
PPFIA1-216ENST00000530746 FOXD1Q16676 465 aa22.22■■□□□ 1.15
PPFIA1-216ENST00000530746 BCANQ96GW7 911 aa22.22■■□□□ 1.15
PPFIA1-216ENST00000530746 SLC26A8Q96RN1 970 aa22.22■■□□□ 1.15
PPFIA1-216ENST00000530746 NUTM2DQ5VT03 806 aaPredicted RBP22.2■■□□□ 1.14
PPFIA1-216ENST00000530746 ZNF326Q5BKZ1 582 aaKnown RBP22.19■■□□□ 1.14
PPFIA1-216ENST00000530746 LRRC7Q96NW7 1537 aa22.18■■□□□ 1.14
PPFIA1-216ENST00000530746 SENP3Q9H4L4 574 aaPredicted RBP22.17■■□□□ 1.14
PPFIA1-216ENST00000530746 NEXMIFQ5QGS0 1516 aa22.16■■□□□ 1.14
PPFIA1-216ENST00000530746 CHD2O14647 1828 aaKnown RBP22.15■■□□□ 1.14
PPFIA1-216ENST00000530746 HRCP23327 699 aa22.15■■□□□ 1.14
PPFIA1-216ENST00000530746 DIP2AQ14689 1571 aa22.15■■□□□ 1.14
PPFIA1-216ENST00000530746 NWD1Q149M9 1564 aa22.14■■□□□ 1.13
PPFIA1-216ENST00000530746 KCNA6P17658 529 aa22.14■■□□□ 1.13
PPFIA1-216ENST00000530746 TBX22Q9Y458 520 aa22.14■■□□□ 1.13
PPFIA1-216ENST00000530746 XIRP1Q702N8 1843 aaKnown RBP22.14■■□□□ 1.13
PPFIA1-216ENST00000530746 CCDC144AA2RUR9 1427 aa22.14■■□□□ 1.13
PPFIA1-216ENST00000530746 ADAMTS13Q76LX8 1427 aa22.14■■□□□ 1.13
PPFIA1-216ENST00000530746 UBAP1LF5GYI3 381 aa22.13■■□□□ 1.13
PPFIA1-216ENST00000530746 NRXN3Q9Y4C0 1643 aa22.12■■□□□ 1.13
PPFIA1-216ENST00000530746 SETBP1Q9Y6X0 1596 aa22.12■■□□□ 1.13
PPFIA1-216ENST00000530746 PPLO60437 1756 aa22.1■■□□□ 1.13
PPFIA1-216ENST00000530746 NKTRP30414 1462 aaKnown RBP22.09■■□□□ 1.13
PPFIA1-216ENST00000530746 RPGRIP1LQ68CZ1 1315 aa22.08■■□□□ 1.13
PPFIA1-216ENST00000530746 TOM1O60784 492 aa22.07■■□□□ 1.12
PPFIA1-216ENST00000530746 PIK3R4Q99570 1358 aa22.07■■□□□ 1.12
PPFIA1-216ENST00000530746 SPATA31E1Q6ZUB1 1445 aa22.06■■□□□ 1.12
PPFIA1-216ENST00000530746 VGFO15240 615 aaPredicted RBP22.05■■□□□ 1.12
PPFIA1-216ENST00000530746 TMEM94Q12767 1356 aa22.04■■□□□ 1.12
PPFIA1-216ENST00000530746 PROSER2Q86WR7 435 aaPredicted RBP22.04■■□□□ 1.12
PPFIA1-216ENST00000530746 ALKQ9UM73 1620 aa22.04■■□□□ 1.12
PPFIA1-216ENST00000530746 IFT172Q9UG01 1749 aa22.03■■□□□ 1.12
PPFIA1-216ENST00000530746 RGL3Q3MIN7 710 aa22.01■■□□□ 1.11
PPFIA1-216ENST00000530746 SETD1AO15047 1707 aaKnown RBP22■■□□□ 1.11
PPFIA1-216ENST00000530746 ANKRD30BQ9BXX2 1392 aa21.99■■□□□ 1.11
PPFIA1-216ENST00000530746 PTPRUQ92729 1446 aa21.99■■□□□ 1.11
PPFIA1-216ENST00000530746 PIP4K2BP78356 416 aa21.99■■□□□ 1.11
PPFIA1-216ENST00000530746 RBM33Q96EV2 1170 aaKnown RBP21.99■■□□□ 1.11
PPFIA1-216ENST00000530746 XRN1Q8IZH2 1706 aaKnown RBP21.99■■□□□ 1.11
PPFIA1-216ENST00000530746 AMOTL2Q9Y2J4 779 aa21.98■■□□□ 1.11
PPFIA1-216ENST00000530746 SCAF1Q9H7N4 1312 aaKnown RBP21.98■■□□□ 1.11
PPFIA1-216ENST00000530746 METP08581 1390 aa21.98■■□□□ 1.11
PPFIA1-216ENST00000530746 NCOA3Q9Y6Q9 1424 aa21.95■■□□□ 1.1
PPFIA1-216ENST00000530746 MSH6P52701 1360 aa21.93■■□□□ 1.1
PPFIA1-216ENST00000530746 ADGRF5Q8IZF2 1346 aa21.93■■□□□ 1.1
PPFIA1-216ENST00000530746 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.89■■□□□ 1.1
PPFIA1-216ENST00000530746 PIK3C2GO75747 1445 aa21.89■■□□□ 1.09
PPFIA1-216ENST00000530746 C14orf37Q86TY3 774 aa21.88■■□□□ 1.09
PPFIA1-216ENST00000530746 MYOM2P54296 1465 aa21.88■■□□□ 1.09
PPFIA1-216ENST00000530746 TRIM26Q12899 539 aaPredicted RBP21.87■■□□□ 1.09
PPFIA1-216ENST00000530746 NRXN1Q9ULB1 1477 aa21.86■■□□□ 1.09
PPFIA1-216ENST00000530746 HSPA1LP34931 641 aa21.86■■□□□ 1.09
PPFIA1-216ENST00000530746 C19orf44Q9H6X5 657 aa21.86■■□□□ 1.09
PPFIA1-216ENST00000530746 PTCH1Q13635 1447 aa21.84■■□□□ 1.09
PPFIA1-216ENST00000530746 FAM135BQ49AJ0 1406 aa21.84■■□□□ 1.09
PPFIA1-216ENST00000530746 PRAG1Q86YV5 1406 aa21.84■■□□□ 1.09
PPFIA1-216ENST00000530746 ROBO1Q9Y6N7 1651 aa21.84■■□□□ 1.09
PPFIA1-216ENST00000530746 LAMC1P11047 1609 aa21.83■■□□□ 1.08
PPFIA1-216ENST00000530746 SLAIN2Q9P270 581 aa21.82■■□□□ 1.08
PPFIA1-216ENST00000530746 NALCNQ8IZF0 1738 aa21.81■■□□□ 1.08
PPFIA1-216ENST00000530746 CADPS2Q86UW7 1296 aa21.81■■□□□ 1.08
PPFIA1-216ENST00000530746 DCCP43146 1447 aa21.8■■□□□ 1.08
PPFIA1-216ENST00000530746 ASXL1Q8IXJ9 1541 aa21.8■■□□□ 1.08
PPFIA1-216ENST00000530746 ROBO2Q9HCK4 1378 aa21.8■■□□□ 1.08
PPFIA1-216ENST00000530746 ATF3P18847 181 aa21.8■■□□□ 1.08
PPFIA1-216ENST00000530746 C14orf93Q9H972 538 aaKnown RBP21.79■■□□□ 1.08
PPFIA1-216ENST00000530746 KNDC1Q76NI1 1749 aa21.79■■□□□ 1.08
PPFIA1-216ENST00000530746 ADGRL3Q9HAR2 1447 aa21.79■■□□□ 1.08
PPFIA1-216ENST00000530746 DCAF11Q8TEB1 546 aa21.78■■□□□ 1.08
PPFIA1-216ENST00000530746 STAC3Q96MF2 364 aa21.78■■□□□ 1.08
PPFIA1-216ENST00000530746 TMEM132EQ6IEE7 984 aa21.77■■□□□ 1.08
PPFIA1-216ENST00000530746 TECPR2O15040 1411 aa21.77■■□□□ 1.08
PPFIA1-216ENST00000530746 LRPPRCP42704 1394 aaKnown RBP21.76■■□□□ 1.07
PPFIA1-216ENST00000530746 DHX57Q6P158 1386 aaKnown RBP21.76■■□□□ 1.07
PPFIA1-216ENST00000530746 CFAP70Q5T0N1 1121 aa21.75■■□□□ 1.07
PPFIA1-216ENST00000530746 KDM2AQ9Y2K7 1162 aa21.75■■□□□ 1.07
PPFIA1-216ENST00000530746 ABCC11Q96J66 1382 aa21.74■■□□□ 1.07
PPFIA1-216ENST00000530746 YTHDC2Q9H6S0 1430 aaKnown RBP21.74■■□□□ 1.07
PPFIA1-216ENST00000530746 STK26Q9P289 416 aa21.74■■□□□ 1.07
PPFIA1-216ENST00000530746 MST1RQ04912 1400 aa21.72■■□□□ 1.07
PPFIA1-216ENST00000530746 PHLPP1O60346 1717 aa21.71■■□□□ 1.07
PPFIA1-216ENST00000530746 ADGRB1O14514 1584 aa21.69■■□□□ 1.06
PPFIA1-216ENST00000530746 WAPLQ7Z5K2 1190 aa21.67■■□□□ 1.06
PPFIA1-216ENST00000530746 SIRT1Q96EB6 747 aa21.67■■□□□ 1.06
PPFIA1-216ENST00000530746 CDC42BPGQ6DT37 1551 aa21.66■■□□□ 1.06
PPFIA1-216ENST00000530746 BRINP3Q76B58 766 aa21.66■■□□□ 1.06
PPFIA1-216ENST00000530746 AHDC1Q5TGY3 1603 aaPredicted RBP21.66■■□□□ 1.06
PPFIA1-216ENST00000530746 PLEKHH1Q9ULM0 1364 aa21.65■■□□□ 1.06
PPFIA1-216ENST00000530746 SIN3AQ96ST3 1273 aa21.65■■□□□ 1.06
PPFIA1-216ENST00000530746 DLC1Q96QB1 1528 aa21.65■■□□□ 1.06
PPFIA1-216ENST00000530746 KIAA1210Q9ULL0 1709 aa21.64■■□□□ 1.06
PPFIA1-216ENST00000530746 COL16A1Q07092 1604 aaPredicted RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms