RNA–Protein interactions for RNA: ENST00000530646.1

RPL38-205, Transcript of ribosomal protein L38, humanhuman

TSL 1 (best)

Gene RPL38, Length 2,450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL38-205ENST00000530646 SEC24BO95487 1268 aa23.37■■□□□ 1.33
RPL38-205ENST00000530646 CCDC141Q6ZP82 1450 aa23.36■■□□□ 1.33
RPL38-205ENST00000530646 PLEKHH1Q9ULM0 1364 aa23.35■■□□□ 1.33
RPL38-205ENST00000530646 BECN1Q14457 450 aa23.35■■□□□ 1.33
RPL38-205ENST00000530646 SHANK2Q9UPX8 1470 aa23.34■■□□□ 1.33
RPL38-205ENST00000530646 PLCH2O75038 1416 aa23.34■■□□□ 1.33
RPL38-205ENST00000530646 FSD2A1L4K1 749 aa23.34■■□□□ 1.33
RPL38-205ENST00000530646 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.34■■□□□ 1.33
RPL38-205ENST00000530646 ARXQ96QS3 562 aa23.34■■□□□ 1.33
RPL38-205ENST00000530646 ADAMTS8Q9UP79 889 aa23.34■■□□□ 1.33
RPL38-205ENST00000530646 ARHGEF5Q12774 1597 aa23.33■■□□□ 1.33
RPL38-205ENST00000530646 PANK2Q9BZ23 570 aa23.32■■□□□ 1.32
RPL38-205ENST00000530646 NUP155O75694 1391 aa23.32■■□□□ 1.32
RPL38-205ENST00000530646 NLRP1Q9C000 1473 aa23.32■■□□□ 1.32
RPL38-205ENST00000530646 WDR7Q9Y4E6 1490 aa23.31■■□□□ 1.32
RPL38-205ENST00000530646 GOLGA6L3A6NEY3 463 aa23.31■■□□□ 1.32
RPL38-205ENST00000530646 EFCAB2Q5VUJ9 269 aa23.31■■□□□ 1.32
RPL38-205ENST00000530646 AFAP1Q8N556 730 aa23.3■■□□□ 1.32
RPL38-205ENST00000530646 ASXL2Q76L83 1435 aa23.3■■□□□ 1.32
RPL38-205ENST00000530646 ZNF521Q96K83 1311 aa23.3■■□□□ 1.32
RPL38-205ENST00000530646 EIF3AQ14152 1382 aaKnown RBP23.3■■□□□ 1.32
RPL38-205ENST00000530646 IGHDP01880 384 aa23.29■■□□□ 1.32
RPL38-205ENST00000530646 TRAPPC8Q9Y2L5 1435 aa23.28■■□□□ 1.32
RPL38-205ENST00000530646 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.27■■□□□ 1.323e-43■□□□□ 8.1
RPL38-205ENST00000530646 GOLGA2Q08379 1002 aa23.26■■□□□ 1.31
RPL38-205ENST00000530646 PANK3Q9H999 370 aa23.26■■□□□ 1.31
RPL38-205ENST00000530646 COL17A1Q9UMD9 1497 aaPredicted RBP23.25■■□□□ 1.31
RPL38-205ENST00000530646 RSPH4AQ5TD94 716 aa23.24■■□□□ 1.31
RPL38-205ENST00000530646 TRPM1Q7Z4N2 1603 aa23.24■■□□□ 1.31
RPL38-205ENST00000530646 DISP3Q9P2K9 1392 aa23.23■■□□□ 1.31
RPL38-205ENST00000530646 NPM1P06748 294 aaKnown RBP eCLIP23.23■■□□□ 1.31
RPL38-205ENST00000530646 SLFN5Q08AF3 891 aa23.22■■□□□ 1.31
RPL38-205ENST00000530646 GZF1Q9H116 711 aaPredicted RBP23.22■■□□□ 1.31
RPL38-205ENST00000530646 KDM5DQ9BY66 1539 aa23.21■■□□□ 1.31
RPL38-205ENST00000530646 CYB5RLQ6IPT4 315 aa23.21■■□□□ 1.31
RPL38-205ENST00000530646 TBC1D2Q9BYX2 928 aa23.21■■□□□ 1.31
RPL38-205ENST00000530646 MCM4P33991 863 aa23.2■■□□□ 1.3
RPL38-205ENST00000530646 MAPK8IP3Q9UPT6 1336 aa23.2■■□□□ 1.3
RPL38-205ENST00000530646 ABCC1P33527 1531 aa23.2■■□□□ 1.3
RPL38-205ENST00000530646 NBPF1Q3BBV0 1214 aa23.19■■□□□ 1.3
RPL38-205ENST00000530646 TRMT2AQ8IZ69 625 aaKnown RBP23.19■■□□□ 1.3
RPL38-205ENST00000530646 PRAG1Q86YV5 1406 aa23.19■■□□□ 1.3
RPL38-205ENST00000530646 BCAR3O75815 825 aa23.19■■□□□ 1.3
RPL38-205ENST00000530646 TESK2Q96S53 571 aa23.19■■□□□ 1.3
RPL38-205ENST00000530646 FANCAO15360 1455 aa23.17■■□□□ 1.3
RPL38-205ENST00000530646 WDR43Q15061 677 aaKnown RBP eCLIP23.16■■□□□ 1.3
RPL38-205ENST00000530646 TBC1D32Q96NH3 1257 aa23.16■■□□□ 1.3
RPL38-205ENST00000530646 SPINK5Q9NQ38 1064 aaPredicted RBP23.16■■□□□ 1.3
RPL38-205ENST00000530646 MRE11P49959 708 aa23.15■■□□□ 1.3
RPL38-205ENST00000530646 ERBB4Q15303 1308 aa23.14■■□□□ 1.3
RPL38-205ENST00000530646 SPAG9O60271 1321 aaKnown RBP23.14■■□□□ 1.29
RPL38-205ENST00000530646 NKTRP30414 1462 aaKnown RBP23.13■■□□□ 1.29
RPL38-205ENST00000530646 PPP2R1AP30153 589 aa23.13■■□□□ 1.29
RPL38-205ENST00000530646 GPRASP1Q5JY77 1395 aa23.13■■□□□ 1.29
RPL38-205ENST00000530646 ABCA9Q8IUA7 1624 aa23.13■■□□□ 1.29
RPL38-205ENST00000530646 ESPNB1AK53 854 aa23.13■■□□□ 1.29
RPL38-205ENST00000530646 MAST1Q9Y2H9 1570 aa23.12■■□□□ 1.29
RPL38-205ENST00000530646 TRAK2O60296 914 aa23.12■■□□□ 1.29
RPL38-205ENST00000530646 SPRYD3Q8NCJ5 442 aa23.12■■□□□ 1.29
RPL38-205ENST00000530646 ERBINQ96RT1 1412 aa23.12■■□□□ 1.29
RPL38-205ENST00000530646 PRDM15P57071 1507 aaPredicted RBP23.1■■□□□ 1.29
RPL38-205ENST00000530646 FAM135AQ9P2D6 1515 aa23.1■■□□□ 1.29
RPL38-205ENST00000530646 CGNL1Q0VF96 1302 aa23.1■■□□□ 1.29
RPL38-205ENST00000530646 CLUAP1Q96AJ1 413 aa23.1■■□□□ 1.29
RPL38-205ENST00000530646 SCAPERQ9BY12 1400 aa23.1■■□□□ 1.29
RPL38-205ENST00000530646 UPF2Q9HAU5 1272 aaKnown RBP23.09■■□□□ 1.29
RPL38-205ENST00000530646 GRPEL1Q9HAV7 217 aa23.09■■□□□ 1.29
RPL38-205ENST00000530646 MYH16Q9H6N6 1097 aa23.08■■□□□ 1.29
RPL38-205ENST00000530646 ADGRL1O94910 1474 aa23.08■■□□□ 1.29
RPL38-205ENST00000530646 PRDM4Q9UKN5 801 aa23.08■■□□□ 1.29
RPL38-205ENST00000530646 LAMC1P11047 1609 aa23.08■■□□□ 1.28
RPL38-205ENST00000530646 PLXNC1O60486 1568 aa23.07■■□□□ 1.28
RPL38-205ENST00000530646 CENPJQ9HC77 1338 aaPredicted RBP23.07■■□□□ 1.28
RPL38-205ENST00000530646 PDE3AQ14432 1141 aa23.06■■□□□ 1.28
RPL38-205ENST00000530646 CCDC146Q8IYE0 955 aa23.06■■□□□ 1.28
RPL38-205ENST00000530646 MAGI2Q86UL8 1455 aa23.05■■□□□ 1.28
RPL38-205ENST00000530646 TMF1P82094 1093 aa23.05■■□□□ 1.28
RPL38-205ENST00000530646 PANK1Q8TE04 598 aa23.05■■□□□ 1.28
RPL38-205ENST00000530646 COG6Q9Y2V7 657 aa23.05■■□□□ 1.28
RPL38-205ENST00000530646 CHMP5Q9NZZ3 219 aa23.04■■□□□ 1.28
RPL38-205ENST00000530646 DUOX2Q9NRD8 1548 aa23.04■■□□□ 1.28
RPL38-205ENST00000530646 PDCL3Q9H2J4 239 aa23.04■■□□□ 1.28
RPL38-205ENST00000530646 ARAP3Q8WWN8 1544 aa23.03■■□□□ 1.28
RPL38-205ENST00000530646 RBM10P98175 930 aaKnown RBP23.03■■□□□ 1.28
RPL38-205ENST00000530646 CD109Q6YHK3 1445 aa23.03■■□□□ 1.28
RPL38-205ENST00000530646 ZFYVE16Q7Z3T8 1539 aa23.03■■□□□ 1.28
RPL38-205ENST00000530646 TPM2P07951 284 aa23.02■■□□□ 1.28
RPL38-205ENST00000530646 RGL3Q3MIN7 710 aa23.02■■□□□ 1.28
RPL38-205ENST00000530646 APAF1O14727 1248 aa23.01■■□□□ 1.27
RPL38-205ENST00000530646 CALD1Q05682 793 aaKnown RBP23.01■■□□□ 1.27
RPL38-205ENST00000530646 DMRT2Q9Y5R5 561 aa23.01■■□□□ 1.27
RPL38-205ENST00000530646 E9PSI1 815 aa23.01■■□□□ 1.27
RPL38-205ENST00000530646 ZMYM3Q14202 1370 aa23.01■■□□□ 1.27
RPL38-205ENST00000530646 AMER1Q5JTC6 1135 aaPredicted RBP23■■□□□ 1.27
RPL38-205ENST00000530646 A2MP01023 1474 aa23■■□□□ 1.27
RPL38-205ENST00000530646 ISY1Q9ULR0 285 aaKnown RBP22.99■■□□□ 1.27
RPL38-205ENST00000530646 KNSTRNQ9Y448 316 aa22.99■■□□□ 1.27
RPL38-205ENST00000530646 NINLQ9Y2I6 1382 aa22.99■■□□□ 1.27
RPL38-205ENST00000530646 UNC13BO14795 1591 aa22.99■■□□□ 1.27
RPL38-205ENST00000530646 PLA2R1Q13018 1463 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms