RNA–Protein interactions for RNA: ENST00000530566.1

POLB-216, Transcript of DNA polymerase beta, humanhuman

TSL 4

Gene POLB, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-216ENST00000530566 SETD1BQ9UPS6 1966 aaKnown RBP13.43□□□□□ -0.26
POLB-216ENST00000530566 ZMYM4Q5VZL5 1548 aa13.41□□□□□ -0.26
POLB-216ENST00000530566 MAGI2Q86UL8 1455 aa13.41□□□□□ -0.26
POLB-216ENST00000530566 VARS2Q5ST30 1063 aaKnown RBP13.4□□□□□ -0.26
POLB-216ENST00000530566 RYDENQ9NUL5 291 aaKnown RBP13.4□□□□□ -0.26
POLB-216ENST00000530566 PPP1R37O75864 691 aa13.39□□□□□ -0.27
POLB-216ENST00000530566 ARSIQ5FYB1 569 aa13.39□□□□□ -0.27
POLB-216ENST00000530566 KRTAP3-3Q9BYR6 98 aa13.39□□□□□ -0.27
POLB-216ENST00000530566 KRTAP3-2Q9BYR7 98 aa13.39□□□□□ -0.27
POLB-216ENST00000530566 RGS17Q9UGC6 210 aaPredicted RBP13.39□□□□□ -0.27
POLB-216ENST00000530566 ATP10BO94823 1461 aa13.38□□□□□ -0.27
POLB-216ENST00000530566 MMRN1Q13201 1228 aa13.38□□□□□ -0.27
POLB-216ENST00000530566 FAM9AQ8IZU1 332 aaPredicted RBP13.38□□□□□ -0.27
POLB-216ENST00000530566 NCKAP5LQ9HCH0 1330 aa13.37□□□□□ -0.27
POLB-216ENST00000530566 GOLGA3Q08378 1498 aa13.36□□□□□ -0.27
POLB-216ENST00000530566 CAMSAP1Q5T5Y3 1602 aa13.35□□□□□ -0.27
POLB-216ENST00000530566 TRAPPC8Q9Y2L5 1435 aa13.35□□□□□ -0.27
POLB-216ENST00000530566 ATP10AO60312 1499 aa13.35□□□□□ -0.27
POLB-216ENST00000530566 C9orf84Q5VXU9 1444 aa13.34□□□□□ -0.27
POLB-216ENST00000530566 HECW1Q76N89 1606 aa13.34□□□□□ -0.27
POLB-216ENST00000530566 CFAP74Q9C0B2 1584 aa13.33□□□□□ -0.28
POLB-216ENST00000530566 SLC34A2O95436 690 aa13.33□□□□□ -0.28
POLB-216ENST00000530566 ESF1Q9H501 851 aaKnown RBP13.33□□□□□ -0.28
POLB-216ENST00000530566 ZNF687Q8N1G0 1237 aa13.32□□□□□ -0.28
POLB-216ENST00000530566 C3P01024 1663 aa13.31□□□□□ -0.28
POLB-216ENST00000530566 ZNF316A6NFI3 1004 aaPredicted RBP13.29□□□□□ -0.28
POLB-216ENST00000530566 POTEAQ6S8J7 498 aa13.29□□□□□ -0.28
POLB-216ENST00000530566 RAPGEF2Q9Y4G8 1499 aa13.29□□□□□ -0.28
POLB-216ENST00000530566 KHSRPQ92945 711 aaKnown RBP eCLIP13.27□□□□□ -0.29
POLB-216ENST00000530566 PCDHGA4Q9Y5G9 962 aa13.27□□□□□ -0.29
POLB-216ENST00000530566 PTPRKQ15262 1439 aa13.27□□□□□ -0.29
POLB-216ENST00000530566 GPHNQ9NQX3 736 aaPredicted RBP13.25□□□□□ -0.29
POLB-216ENST00000530566 SRCAPQ6ZRS2 3230 aa13.24□□□□□ -0.29
POLB-216ENST00000530566 CPS1P31327 1500 aa13.24□□□□□ -0.29
POLB-216ENST00000530566 SCAPERQ9BY12 1400 aa13.24□□□□□ -0.29
POLB-216ENST00000530566 NUDT7P0C024 238 aa13.24□□□□□ -0.29
POLB-216ENST00000530566 FOXK1P85037 733 aa13.24□□□□□ -0.29
POLB-216ENST00000530566 NKX1-1Q15270 411 aaPredicted RBP13.24□□□□□ -0.29
POLB-216ENST00000530566 SETD1AO15047 1707 aaKnown RBP13.22□□□□□ -0.29
POLB-216ENST00000530566 PLA2R1Q13018 1463 aa13.22□□□□□ -0.29
POLB-216ENST00000530566 UPF1Q92900 1129 aaKnown RBP eCLIP13.21□□□□□ -0.29
POLB-216ENST00000530566 PLPP6Q8IY26 295 aa13.2□□□□□ -0.3
POLB-216ENST00000530566 MYT1LQ9UL68 1186 aa13.2□□□□□ -0.3
POLB-216ENST00000530566 TCOF1Q13428 1488 aaKnown RBP13.2□□□□□ -0.3
POLB-216ENST00000530566 CTTNBP2Q8WZ74 1663 aa13.2□□□□□ -0.3
POLB-216ENST00000530566 PLEKHD1A6NEE1 506 aa13.19□□□□□ -0.3
POLB-216ENST00000530566 P3H3Q8IVL6 736 aa13.19□□□□□ -0.3
POLB-216ENST00000530566 PSDA5PKW4 1024 aaPredicted RBP13.18□□□□□ -0.3
POLB-216ENST00000530566 NPATQ14207 1427 aa13.18□□□□□ -0.3
POLB-216ENST00000530566 ALKQ9UM73 1620 aa13.17□□□□□ -0.3
POLB-216ENST00000530566 SHANK2Q9UPX8 1470 aa13.17□□□□□ -0.3
POLB-216ENST00000530566 CNTLNQ9NXG0 1405 aa13.17□□□□□ -0.3
POLB-216ENST00000530566 TBC1D12O60347 775 aa13.17□□□□□ -0.3
POLB-216ENST00000530566 PTCD2Q8WV60 388 aaKnown RBP13.17□□□□□ -0.3
POLB-216ENST00000530566 LHX6Q9UPM6 363 aa13.17□□□□□ -0.3
POLB-216ENST00000530566 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.17□□□□□ -0.3
POLB-216ENST00000530566 PBX2P40425 430 aa13.16□□□□□ -0.3
POLB-216ENST00000530566 PTGER2P43116 358 aa13.16□□□□□ -0.3
POLB-216ENST00000530566 SUPT6HQ7KZ85 1726 aaKnown RBP13.16□□□□□ -0.3
POLB-216ENST00000530566 DSG2Q14126 1118 aa13.15□□□□□ -0.3
POLB-216ENST00000530566 AGLP35573 1532 aa13.13□□□□□ -0.31
POLB-216ENST00000530566 RAPGEF6Q8TEU7 1601 aa13.13□□□□□ -0.31
POLB-216ENST00000530566 SUPT5HO00267 1087 aaKnown RBP13.13□□□□□ -0.31
POLB-216ENST00000530566 ANKRD13DQ6ZTN6 518 aa13.11□□□□□ -0.31
POLB-216ENST00000530566 ZNF142P52746 1687 aaPredicted RBP13.11□□□□□ -0.31
POLB-216ENST00000530566 REREQ9P2R6 1566 aa13.11□□□□□ -0.31
POLB-216ENST00000530566 CEP170BQ9Y4F5 1589 aaPredicted RBP13.11□□□□□ -0.31
POLB-216ENST00000530566 ZNF518AQ6AHZ1 1483 aa13.1□□□□□ -0.31
POLB-216ENST00000530566 GTPBP6O43824 516 aaPredicted RBP13.1□□□□□ -0.31
POLB-216ENST00000530566 PDE4AP27815 886 aa13.1□□□□□ -0.31
POLB-216ENST00000530566 LSM11P83369 360 aaKnown RBP eCLIP13.1□□□□□ -0.31
POLB-216ENST00000530566 RNF166Q96A37 237 aaPredicted RBP13.1□□□□□ -0.31
POLB-216ENST00000530566 DIP2CQ9Y2E4 1556 aa13.1□□□□□ -0.31
POLB-216ENST00000530566 MYO3AQ8NEV4 1616 aa13.1□□□□□ -0.31
POLB-216ENST00000530566 ZMYM3Q14202 1370 aa13.09□□□□□ -0.31
POLB-216ENST00000530566 PLCH2O75038 1416 aa13.09□□□□□ -0.31
POLB-216ENST00000530566 AFAP1Q8N556 730 aa13.09□□□□□ -0.31
POLB-216ENST00000530566 CRISPLD2Q9H0B8 497 aa13.09□□□□□ -0.31
POLB-216ENST00000530566 NUP153P49790 1475 aaKnown RBP13.09□□□□□ -0.31
POLB-216ENST00000530566 EFCAB2Q5VUJ9 269 aa13.08□□□□□ -0.32
POLB-216ENST00000530566 MROH2AA6NES4 1674 aa13.06□□□□□ -0.32
POLB-216ENST00000530566 PPP1R15BQ5SWA1 713 aa13.05□□□□□ -0.32
POLB-216ENST00000530566 TRIM52Q96A61 297 aa13.05□□□□□ -0.32
POLB-216ENST00000530566 KDM5CP41229 1560 aa13.04□□□□□ -0.32
POLB-216ENST00000530566 RNF17Q9BXT8 1623 aaKnown RBP13.04□□□□□ -0.32
POLB-216ENST00000530566 VWDEQ8N2E2 1590 aa13.03□□□□□ -0.32
POLB-216ENST00000530566 ABCA6Q8N139 1617 aa13.03□□□□□ -0.32
POLB-216ENST00000530566 ARHGAP33O14559 1287 aa13.02□□□□□ -0.33
POLB-216ENST00000530566 PPP4R3BQ5MIZ7 849 aa13.02□□□□□ -0.33
POLB-216ENST00000530566 POLR1AO95602 1720 aaPredicted RBP13.02□□□□□ -0.33
POLB-216ENST00000530566 OXER1Q8TDS5 423 aa13.01□□□□□ -0.33
POLB-216ENST00000530566 NEURL4Q96JN8 1562 aa13.01□□□□□ -0.33
POLB-216ENST00000530566 LRRC7Q96NW7 1537 aa13□□□□□ -0.33
POLB-216ENST00000530566 MLH3Q9UHC1 1453 aa13□□□□□ -0.33
POLB-216ENST00000530566 AXIN2Q9Y2T1 843 aa13□□□□□ -0.33
POLB-216ENST00000530566 A2ML1A8K2U0 1454 aa12.99□□□□□ -0.33
POLB-216ENST00000530566 ANKLE2Q86XL3 938 aa12.99□□□□□ -0.33
POLB-216ENST00000530566 DNMT1P26358 1616 aaKnown RBP12.99□□□□□ -0.33
POLB-216ENST00000530566 DDX27Q96GQ7 796 aaKnown RBP12.98□□□□□ -0.33
POLB-216ENST00000530566 LARP6Q9BRS8 491 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms