RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 HDGFP51858 240 aaKnown RBP20.55■□□□□ 0.88
NR1H3-231ENST00000529540 UHRF1BP1Q6BDS2 1440 aa20.54■□□□□ 0.88
NR1H3-231ENST00000529540 ZNF142P52746 1687 aaPredicted RBP20.54■□□□□ 0.88
NR1H3-231ENST00000529540 CEP170BQ9Y4F5 1589 aaPredicted RBP20.54■□□□□ 0.88
NR1H3-231ENST00000529540 PPP1R15AO75807 674 aaPredicted RBP20.54■□□□□ 0.88
NR1H3-231ENST00000529540 DCAF11Q8TEB1 546 aa20.54■□□□□ 0.88
NR1H3-231ENST00000529540 MYOM2P54296 1465 aa20.54■□□□□ 0.88
NR1H3-231ENST00000529540 UBR1Q8IWV7 1749 aa20.52■□□□□ 0.88
NR1H3-231ENST00000529540 THEMISQ8N1K5 641 aaPredicted RBP20.52■□□□□ 0.88
NR1H3-231ENST00000529540 VGFO15240 615 aaPredicted RBP20.51■□□□□ 0.87
NR1H3-231ENST00000529540 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.51■□□□□ 0.87
NR1H3-231ENST00000529540 IFT172Q9UG01 1749 aa20.5■□□□□ 0.87
NR1H3-231ENST00000529540 ZFYVE9O95405 1425 aa20.5■□□□□ 0.87
NR1H3-231ENST00000529540 NEXMIFQ5QGS0 1516 aa20.49■□□□□ 0.87
NR1H3-231ENST00000529540 PPLO60437 1756 aa20.49■□□□□ 0.87
NR1H3-231ENST00000529540 TMEM2Q9UHN6 1383 aa20.48■□□□□ 0.87
NR1H3-231ENST00000529540 KDM2AQ9Y2K7 1162 aa20.47■□□□□ 0.87
NR1H3-231ENST00000529540 MYO5BQ9ULV0 1848 aa20.46■□□□□ 0.87
NR1H3-231ENST00000529540 SLIT1O75093 1534 aa20.46■□□□□ 0.87
NR1H3-231ENST00000529540 PRAG1Q86YV5 1406 aa20.46■□□□□ 0.87
NR1H3-231ENST00000529540 RIMS2Q9UQ26 1411 aa20.46■□□□□ 0.87
NR1H3-231ENST00000529540 NRXN1Q9ULB1 1477 aa20.45■□□□□ 0.86
NR1H3-231ENST00000529540 ARHGAP23Q9P227 1491 aa20.44■□□□□ 0.86
NR1H3-231ENST00000529540 SUPT16HQ9Y5B9 1047 aaKnown RBP20.44■□□□□ 0.86
NR1H3-231ENST00000529540 EID1Q9Y6B2 187 aa20.44■□□□□ 0.86
NR1H3-231ENST00000529540 PIK3C2GO75747 1445 aa20.4■□□□□ 0.86
NR1H3-231ENST00000529540 RALGAPBQ86X10 1494 aa20.39■□□□□ 0.85
NR1H3-231ENST00000529540 LAMC1P11047 1609 aa20.39■□□□□ 0.85
NR1H3-231ENST00000529540 KIAA1210Q9ULL0 1709 aa20.39■□□□□ 0.85
NR1H3-231ENST00000529540 ADGRF5Q8IZF2 1346 aa20.38■□□□□ 0.85
NR1H3-231ENST00000529540 SCAF11Q99590 1463 aaKnown RBP20.37■□□□□ 0.85
NR1H3-231ENST00000529540 NBPF8Q3BBV2 869 aa20.37■□□□□ 0.85
NR1H3-231ENST00000529540 TXNDC2Q86VQ3 553 aa20.36■□□□□ 0.85
NR1H3-231ENST00000529540 ANKLE2Q86XL3 938 aa20.36■□□□□ 0.85
NR1H3-231ENST00000529540 TRPM1Q7Z4N2 1603 aa20.36■□□□□ 0.85
NR1H3-231ENST00000529540 PLEKHG1Q9ULL1 1385 aa20.36■□□□□ 0.85
NR1H3-231ENST00000529540 ROCK2O75116 1388 aaKnown RBP20.34■□□□□ 0.85
NR1H3-231ENST00000529540 SETBP1Q9Y6X0 1596 aa20.33■□□□□ 0.85
NR1H3-231ENST00000529540 C14orf93Q9H972 538 aaKnown RBP20.33■□□□□ 0.85
NR1H3-231ENST00000529540 GPRASP1Q5JY77 1395 aa20.33■□□□□ 0.84
NR1H3-231ENST00000529540 LMTK3Q96Q04 1460 aa20.32■□□□□ 0.84
NR1H3-231ENST00000529540 NUTM2DQ5VT03 806 aaPredicted RBP20.32■□□□□ 0.84
NR1H3-231ENST00000529540 LTKP29376 864 aa20.3■□□□□ 0.84
NR1H3-231ENST00000529540 DIP2AQ14689 1571 aa20.29■□□□□ 0.84
NR1H3-231ENST00000529540 CARD11Q9BXL7 1154 aa20.29■□□□□ 0.84
NR1H3-231ENST00000529540 POLR1AO95602 1720 aaPredicted RBP20.28■□□□□ 0.84
NR1H3-231ENST00000529540 MED14O60244 1454 aa20.28■□□□□ 0.84
NR1H3-231ENST00000529540 BCANQ96GW7 911 aa20.28■□□□□ 0.84
NR1H3-231ENST00000529540 ALKQ9UM73 1620 aa20.28■□□□□ 0.84
NR1H3-231ENST00000529540 CFAP70Q5T0N1 1121 aa20.27■□□□□ 0.84
NR1H3-231ENST00000529540 NRXN3Q9Y4C0 1643 aa20.25■□□□□ 0.83
NR1H3-231ENST00000529540 EIF3AQ14152 1382 aaKnown RBP20.24■□□□□ 0.83
NR1H3-231ENST00000529540 EIF4G2P78344 907 aaKnown RBP eCLIP20.24■□□□□ 0.83
NR1H3-231ENST00000529540 IQGAP1P46940 1657 aa20.24■□□□□ 0.83
NR1H3-231ENST00000529540 ADGRB1O14514 1584 aa20.24■□□□□ 0.83
NR1H3-231ENST00000529540 NPHP4O75161 1426 aaPredicted RBP20.23■□□□□ 0.83
NR1H3-231ENST00000529540 NBPF1Q3BBV0 1214 aa20.23■□□□□ 0.83
NR1H3-231ENST00000529540 TBX22Q9Y458 520 aa20.23■□□□□ 0.83
NR1H3-231ENST00000529540 ADAMTS13Q76LX8 1427 aa20.23■□□□□ 0.83
NR1H3-231ENST00000529540 PIK3R4Q99570 1358 aa20.22■□□□□ 0.83
NR1H3-231ENST00000529540 SETD1AO15047 1707 aaKnown RBP20.21■□□□□ 0.83
NR1H3-231ENST00000529540 USP47Q96K76 1375 aa20.21■□□□□ 0.83
NR1H3-231ENST00000529540 TSHZ2Q9NRE2 1034 aa20.19■□□□□ 0.82
NR1H3-231ENST00000529540 SLC24A1O60721 1099 aa20.18■□□□□ 0.82
NR1H3-231ENST00000529540 HSPA2P54652 639 aa20.18■□□□□ 0.82
NR1H3-231ENST00000529540 YTHDC2Q9H6S0 1430 aaKnown RBP20.17■□□□□ 0.82
NR1H3-231ENST00000529540 ASXL1Q8IXJ9 1541 aa20.17■□□□□ 0.82
NR1H3-231ENST00000529540 LRPPRCP42704 1394 aaKnown RBP20.17■□□□□ 0.82
NR1H3-231ENST00000529540 NCKAP5LQ9HCH0 1330 aa20.16■□□□□ 0.82
NR1H3-231ENST00000529540 ABCC11Q96J66 1382 aa20.15■□□□□ 0.82
NR1H3-231ENST00000529540 TMEM132EQ6IEE7 984 aa20.15■□□□□ 0.82
NR1H3-231ENST00000529540 SLC26A8Q96RN1 970 aa20.15■□□□□ 0.82
NR1H3-231ENST00000529540 DMRT2Q9Y5R5 561 aa20.15■□□□□ 0.82
NR1H3-231ENST00000529540 METP08581 1390 aa20.14■□□□□ 0.82
NR1H3-231ENST00000529540 DLC1Q96QB1 1528 aa20.14■□□□□ 0.82
NR1H3-231ENST00000529540 AEBP2Q6ZN18 517 aaPredicted RBP20.14■□□□□ 0.81
NR1H3-231ENST00000529540 TECPR2O15040 1411 aa20.14■□□□□ 0.81
NR1H3-231ENST00000529540 HSPA5P11021 654 aaKnown RBP20.13■□□□□ 0.81
NR1H3-231ENST00000529540 SIRT1Q96EB6 747 aa20.13■□□□□ 0.81
NR1H3-231ENST00000529540 KNDC1Q76NI1 1749 aa20.13■□□□□ 0.81
NR1H3-231ENST00000529540 SENP3Q9H4L4 574 aaPredicted RBP20.12■□□□□ 0.81
NR1H3-231ENST00000529540 CCER2I3L3R5 266 aa20.11■□□□□ 0.81
NR1H3-231ENST00000529540 TRAK1Q9UPV9 953 aa20.1■□□□□ 0.81
NR1H3-231ENST00000529540 STRCQ7RTU9 1775 aa20.1■□□□□ 0.81
NR1H3-231ENST00000529540 FAM135BQ49AJ0 1406 aa20.1■□□□□ 0.81
NR1H3-231ENST00000529540 CPS1P31327 1500 aa20.1■□□□□ 0.81
NR1H3-231ENST00000529540 SBNO2Q9Y2G9 1366 aa20.1■□□□□ 0.81
NR1H3-231ENST00000529540 PTCH1Q13635 1447 aa20.09■□□□□ 0.81
NR1H3-231ENST00000529540 ARHGEF28Q8N1W1 1705 aaKnown RBP20.09■□□□□ 0.81
NR1H3-231ENST00000529540 CENPJQ9HC77 1338 aaPredicted RBP20.08■□□□□ 0.81
NR1H3-231ENST00000529540 ST20-MTHFSA0A0A6YYL1 179 aa20.08■□□□□ 0.81
NR1H3-231ENST00000529540 STK26Q9P289 416 aa20.08■□□□□ 0.81
NR1H3-231ENST00000529540 AMOTL2Q9Y2J4 779 aa20.07■□□□□ 0.8
NR1H3-231ENST00000529540 XRN1Q8IZH2 1706 aaKnown RBP20.06■□□□□ 0.8
NR1H3-231ENST00000529540 NWD1Q149M9 1564 aa20.05■□□□□ 0.8
NR1H3-231ENST00000529540 POGKQ9P215 609 aa20.05■□□□□ 0.8
NR1H3-231ENST00000529540 CHD2O14647 1828 aaKnown RBP20.05■□□□□ 0.8
NR1H3-231ENST00000529540 PTPRUQ92729 1446 aa20.04■□□□□ 0.8
NR1H3-231ENST00000529540 KCNA6P17658 529 aa20.04■□□□□ 0.8
NR1H3-231ENST00000529540 DDX10Q13206 875 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms