RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 KIF3AQ9Y496 699 aa9.99□□□□□ -0.81
CTNND1-220ENST00000529526 TPD52L1Q16890 204 aaPredicted RBP9.99□□□□□ -0.81
CTNND1-220ENST00000529526 HMOX1P09601 288 aa9.99□□□□□ -0.81
CTNND1-220ENST00000529526 RAD21O60216 631 aa9.98□□□□□ -0.81
CTNND1-220ENST00000529526 DZIP1LQ8IYY4 767 aaKnown RBP9.98□□□□□ -0.81
CTNND1-220ENST00000529526 PRDM2Q13029 1718 aa9.98□□□□□ -0.81
CTNND1-220ENST00000529526 MSH5O43196 834 aa9.98□□□□□ -0.81
CTNND1-220ENST00000529526 DDX19BQ9UMR2 479 aa9.98□□□□□ -0.81
CTNND1-220ENST00000529526 TPM3P06753 285 aa9.98□□□□□ -0.81
CTNND1-220ENST00000529526 SYTL4Q96C24 671 aaPredicted RBP9.98□□□□□ -0.81
CTNND1-220ENST00000529526 NEXNQ0ZGT2 675 aa9.97□□□□□ -0.81
CTNND1-220ENST00000529526 GOLGA6L1Q8N7Z2 621 aa9.97□□□□□ -0.81
CTNND1-220ENST00000529526 AKAP17AQ02040 695 aaKnown RBP9.97□□□□□ -0.81
CTNND1-220ENST00000529526 IFIT2P09913 472 aaKnown RBP9.97□□□□□ -0.81
CTNND1-220ENST00000529526 PRM3Q9NNZ6 103 aa9.97□□□□□ -0.81
CTNND1-220ENST00000529526 GSE1Q14687 1217 aa9.97□□□□□ -0.81
CTNND1-220ENST00000529526 GOLGA6L19H0YKK7 550 aa9.96□□□□□ -0.81
CTNND1-220ENST00000529526 FOSBP53539 338 aa9.96□□□□□ -0.81
CTNND1-220ENST00000529526 PSME1Q06323 249 aa9.96□□□□□ -0.81
CTNND1-220ENST00000529526 FKBP5Q13451 457 aaPredicted RBP9.96□□□□□ -0.81
CTNND1-220ENST00000529526 RAD54L2Q9Y4B4 1467 aa9.96□□□□□ -0.82
CTNND1-220ENST00000529526 APPP05067 770 aa9.96□□□□□ -0.82
CTNND1-220ENST00000529526 RUNDC1Q96C34 613 aa9.96□□□□□ -0.82
CTNND1-220ENST00000529526 KIF7Q2M1P5 1343 aa9.96□□□□□ -0.82
CTNND1-220ENST00000529526 NUTM2GQ5VZR2 741 aa9.96□□□□□ -0.82
CTNND1-220ENST00000529526 CCAR2Q8N163 923 aaKnown RBP9.95□□□□□ -0.82
CTNND1-220ENST00000529526 BECN2A8MW95 431 aa9.95□□□□□ -0.82
CTNND1-220ENST00000529526 CABP2Q9NPB3 220 aa9.95□□□□□ -0.82
CTNND1-220ENST00000529526 SYNE3Q6ZMZ3 975 aa9.95□□□□□ -0.82
CTNND1-220ENST00000529526 PANK1Q8TE04 598 aa9.95□□□□□ -0.82
CTNND1-220ENST00000529526 FBXW7Q969H0 707 aa9.95□□□□□ -0.82
CTNND1-220ENST00000529526 GGNBP2Q9H3C7 697 aa9.95□□□□□ -0.82
CTNND1-220ENST00000529526 TSPYL4Q9UJ04 414 aa9.95□□□□□ -0.82
CTNND1-220ENST00000529526 FGD5Q6ZNL6 1462 aa9.95□□□□□ -0.82
CTNND1-220ENST00000529526 ATP6V1DQ9Y5K8 247 aa9.94□□□□□ -0.82
CTNND1-220ENST00000529526 CCDC7Q96M83 1385 aa9.94□□□□□ -0.82
CTNND1-220ENST00000529526 SKOR2Q2VWA4 1001 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-220ENST00000529526 RUFY2Q8WXA3 655 aa9.94□□□□□ -0.82
CTNND1-220ENST00000529526 LNPKQ9C0E8 428 aa9.94□□□□□ -0.82
CTNND1-220ENST00000529526 REC8O95072 547 aa9.94□□□□□ -0.82
CTNND1-220ENST00000529526 ZNF592Q92610 1267 aa9.94□□□□□ -0.82
CTNND1-220ENST00000529526 API5Q9BZZ5 524 aaKnown RBP9.94□□□□□ -0.82
CTNND1-220ENST00000529526 TNNT3P45378 269 aaPredicted RBP9.94□□□□□ -0.82
CTNND1-220ENST00000529526 USP35Q9P2H5 1018 aa9.94□□□□□ -0.82
CTNND1-220ENST00000529526 TMEM132EQ6IEE7 984 aa9.93□□□□□ -0.82
CTNND1-220ENST00000529526 GAPVD1Q14C86 1478 aa9.93□□□□□ -0.82
CTNND1-220ENST00000529526 FGD6Q6ZV73 1430 aa9.93□□□□□ -0.82
CTNND1-220ENST00000529526 ZKSCAN1P17029 563 aaPredicted RBP9.93□□□□□ -0.82
CTNND1-220ENST00000529526 CEP89Q96ST8 783 aa9.93□□□□□ -0.82
CTNND1-220ENST00000529526 MYOM3Q5VTT5 1437 aa9.93□□□□□ -0.82
CTNND1-220ENST00000529526 AIMP1Q12904 312 aaKnown RBP9.93□□□□□ -0.82
CTNND1-220ENST00000529526 G3BP1Q13283 466 aaKnown RBP eCLIP9.93□□□□□ -0.828e-9■□□□□ 11.1
CTNND1-220ENST00000529526 TRIM29Q14134 588 aa9.93□□□□□ -0.82
CTNND1-220ENST00000529526 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.93□□□□□ -0.82
CTNND1-220ENST00000529526 WWC1Q8IX03 1113 aa9.92□□□□□ -0.82
CTNND1-220ENST00000529526 TSR1Q2NL82 804 aaKnown RBP9.92□□□□□ -0.82
CTNND1-220ENST00000529526 VPS37DQ86XT2 251 aa9.92□□□□□ -0.82
CTNND1-220ENST00000529526 VPS37CA5D8V6 355 aaPredicted RBP9.91□□□□□ -0.82
CTNND1-220ENST00000529526 DDX58O95786 925 aaKnown RBP9.91□□□□□ -0.82
CTNND1-220ENST00000529526 NOL10Q9BSC4 688 aaKnown RBP9.91□□□□□ -0.82
CTNND1-220ENST00000529526 IGF1RP08069 1367 aa9.91□□□□□ -0.82
CTNND1-220ENST00000529526 CNTLNQ9NXG0 1405 aa9.91□□□□□ -0.82
CTNND1-220ENST00000529526 CPLX1O14810 134 aa9.91□□□□□ -0.82
CTNND1-220ENST00000529526 NFXL1Q6ZNB6 911 aa9.91□□□□□ -0.82
CTNND1-220ENST00000529526 BICD2Q8TD16 824 aa9.91□□□□□ -0.82
CTNND1-220ENST00000529526 ROCK1Q13464 1354 aa9.91□□□□□ -0.82
CTNND1-220ENST00000529526 DHX16O60231 1041 aaKnown RBP9.91□□□□□ -0.82
CTNND1-220ENST00000529526 PCMTD1Q96MG8 357 aaPredicted RBP9.91□□□□□ -0.82
CTNND1-220ENST00000529526 TRIM34Q9BYJ4 488 aa9.91□□□□□ -0.82
CTNND1-220ENST00000529526 AMOTL1Q8IY63 956 aa9.9□□□□□ -0.82
CTNND1-220ENST00000529526 CUX1P39880 1505 aa9.9□□□□□ -0.82
CTNND1-220ENST00000529526 TPM2P07951 284 aa9.9□□□□□ -0.82
CTNND1-220ENST00000529526 LRRFIP1Q32MZ4 808 aaKnown RBP9.9□□□□□ -0.82
CTNND1-220ENST00000529526 INTS3Q68E01 1043 aaKnown RBP9.9□□□□□ -0.82
CTNND1-220ENST00000529526 GNAI1P63096 354 aa9.9□□□□□ -0.82
CTNND1-220ENST00000529526 KDM4AO75164 1064 aa9.9□□□□□ -0.82
CTNND1-220ENST00000529526 ADAMTS8Q9UP79 889 aa9.9□□□□□ -0.82
CTNND1-220ENST00000529526 HSP90AA2PQ14568 343 aaPredicted RBP9.9□□□□□ -0.83
CTNND1-220ENST00000529526 KIF21BO75037 1637 aa9.9□□□□□ -0.83
CTNND1-220ENST00000529526 FAM69CQ0P6D2 419 aa9.89□□□□□ -0.83
CTNND1-220ENST00000529526 RIC3Q7Z5B4 369 aa9.89□□□□□ -0.83
CTNND1-220ENST00000529526 NEUROD6Q96NK8 337 aa9.89□□□□□ -0.83
CTNND1-220ENST00000529526 CPLX2Q6PUV4 134 aaKnown RBP9.89□□□□□ -0.83
CTNND1-220ENST00000529526 CHMP5Q9NZZ3 219 aa9.89□□□□□ -0.83
CTNND1-220ENST00000529526 TPM1P09493 284 aa9.89□□□□□ -0.83
CTNND1-220ENST00000529526 CHMP4CQ96CF2 233 aa9.89□□□□□ -0.83
CTNND1-220ENST00000529526 C22orf23Q9BZE7 217 aa9.89□□□□□ -0.83
CTNND1-220ENST00000529526 SMC3Q9UQE7 1217 aa9.89□□□□□ -0.83
CTNND1-220ENST00000529526 FYB1O15117 783 aa9.89□□□□□ -0.83
CTNND1-220ENST00000529526 CDCA7LQ96GN5 454 aa9.89□□□□□ -0.83
CTNND1-220ENST00000529526 TRDNQ13061 729 aa9.88□□□□□ -0.83
CTNND1-220ENST00000529526 RNF20Q5VTR2 975 aa9.88□□□□□ -0.83
CTNND1-220ENST00000529526 FANCIQ9NVI1 1328 aa9.88□□□□□ -0.83
CTNND1-220ENST00000529526 MEX3CQ5U5Q3 659 aaKnown RBP9.88□□□□□ -0.83
CTNND1-220ENST00000529526 OSCARQ8IYS5 282 aa9.88□□□□□ -0.83
CTNND1-220ENST00000529526 TCEAL9Q9UHQ7 104 aa9.88□□□□□ -0.83
CTNND1-220ENST00000529526 AQRO60306 1485 aaKnown RBP eCLIP9.88□□□□□ -0.832e-9■■■□□ 18.1
CTNND1-220ENST00000529526 LRRC9Q6ZRR7 1453 aa9.88□□□□□ -0.83
CTNND1-220ENST00000529526 WASHC2AQ641Q2 1341 aa9.88□□□□□ -0.83
CTNND1-220ENST00000529526 BCL11BQ9C0K0 894 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms