RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 HSPA2P54652 639 aa16.56■□□□□ 0.24
CAPN1-217ENST00000529133 L3MBTL2Q969R5 705 aa16.56■□□□□ 0.24
CAPN1-217ENST00000529133 IFT172Q9UG01 1749 aa16.56■□□□□ 0.24
CAPN1-217ENST00000529133 AEBP2Q6ZN18 517 aaPredicted RBP16.55■□□□□ 0.24
CAPN1-217ENST00000529133 PPLO60437 1756 aa16.55■□□□□ 0.24
CAPN1-217ENST00000529133 MYOM2P54296 1465 aa16.54■□□□□ 0.24
CAPN1-217ENST00000529133 SCAF11Q99590 1463 aaKnown RBP16.54■□□□□ 0.24
CAPN1-217ENST00000529133 LTKP29376 864 aa16.52■□□□□ 0.24
CAPN1-217ENST00000529133 NUTM2DQ5VT03 806 aaPredicted RBP16.52■□□□□ 0.24
CAPN1-217ENST00000529133 TXNDC2Q86VQ3 553 aa16.52■□□□□ 0.24
CAPN1-217ENST00000529133 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.52■□□□□ 0.24
CAPN1-217ENST00000529133 DCAF11Q8TEB1 546 aa16.52■□□□□ 0.24
CAPN1-217ENST00000529133 TIMELESSQ9UNS1 1208 aa16.52■□□□□ 0.24
CAPN1-217ENST00000529133 EID1Q9Y6B2 187 aa16.51■□□□□ 0.23
CAPN1-217ENST00000529133 ADGRF5Q8IZF2 1346 aa16.5■□□□□ 0.23
CAPN1-217ENST00000529133 NRXN1Q9ULB1 1477 aa16.5■□□□□ 0.23
CAPN1-217ENST00000529133 PPP1R15AO75807 674 aaPredicted RBP16.5■□□□□ 0.23
CAPN1-217ENST00000529133 HDGFP51858 240 aaKnown RBP16.5■□□□□ 0.23
CAPN1-217ENST00000529133 ANKLE2Q86XL3 938 aa16.5■□□□□ 0.23
CAPN1-217ENST00000529133 VGFO15240 615 aaPredicted RBP16.49■□□□□ 0.23
CAPN1-217ENST00000529133 STAC3Q96MF2 364 aa16.49■□□□□ 0.23
CAPN1-217ENST00000529133 KDM2AQ9Y2K7 1162 aa16.49■□□□□ 0.23
CAPN1-217ENST00000529133 PLEKHG1Q9ULL1 1385 aa16.49■□□□□ 0.23
CAPN1-217ENST00000529133 NCKAP5LQ9HCH0 1330 aa16.48■□□□□ 0.23
CAPN1-217ENST00000529133 POLR1AO95602 1720 aaPredicted RBP16.48■□□□□ 0.23
CAPN1-217ENST00000529133 PIK3C2GO75747 1445 aa16.47■□□□□ 0.23
CAPN1-217ENST00000529133 PRAG1Q86YV5 1406 aa16.47■□□□□ 0.23
CAPN1-217ENST00000529133 MED14O60244 1454 aa16.47■□□□□ 0.23
CAPN1-217ENST00000529133 SETBP1Q9Y6X0 1596 aa16.47■□□□□ 0.23
CAPN1-217ENST00000529133 NPHP4O75161 1426 aaPredicted RBP16.46■□□□□ 0.23
CAPN1-217ENST00000529133 NRXN3Q9Y4C0 1643 aa16.45■□□□□ 0.22
CAPN1-217ENST00000529133 STRCQ7RTU9 1775 aa16.44■□□□□ 0.22
CAPN1-217ENST00000529133 IQGAP1P46940 1657 aa16.44■□□□□ 0.22
CAPN1-217ENST00000529133 SENP3Q9H4L4 574 aaPredicted RBP16.44■□□□□ 0.22
CAPN1-217ENST00000529133 ADAMTS13Q76LX8 1427 aa16.44■□□□□ 0.22
CAPN1-217ENST00000529133 NBPF8Q3BBV2 869 aa16.43■□□□□ 0.22
CAPN1-217ENST00000529133 ALKQ9UM73 1620 aa16.41■□□□□ 0.22
CAPN1-217ENST00000529133 BCANQ96GW7 911 aa16.41■□□□□ 0.22
CAPN1-217ENST00000529133 DIP2AQ14689 1571 aa16.4■□□□□ 0.22
CAPN1-217ENST00000529133 C14orf93Q9H972 538 aaKnown RBP16.4■□□□□ 0.22
CAPN1-217ENST00000529133 LAMC1P11047 1609 aa16.4■□□□□ 0.22
CAPN1-217ENST00000529133 SETD1AO15047 1707 aaKnown RBP16.39■□□□□ 0.21
CAPN1-217ENST00000529133 TRPM1Q7Z4N2 1603 aa16.39■□□□□ 0.21
CAPN1-217ENST00000529133 CFAP70Q5T0N1 1121 aa16.39■□□□□ 0.21
CAPN1-217ENST00000529133 RALGAPBQ86X10 1494 aa16.39■□□□□ 0.21
CAPN1-217ENST00000529133 ASXL1Q8IXJ9 1541 aa16.39■□□□□ 0.21
CAPN1-217ENST00000529133 ZEB1P37275 1124 aaPredicted RBP16.38■□□□□ 0.21
CAPN1-217ENST00000529133 SLC26A8Q96RN1 970 aa16.38■□□□□ 0.21
CAPN1-217ENST00000529133 KIAA1210Q9ULL0 1709 aa16.38■□□□□ 0.21
CAPN1-217ENST00000529133 TBX22Q9Y458 520 aa16.37■□□□□ 0.21
CAPN1-217ENST00000529133 ADGRB1O14514 1584 aa16.36■□□□□ 0.21
CAPN1-217ENST00000529133 METP08581 1390 aa16.36■□□□□ 0.21
CAPN1-217ENST00000529133 NBPF1Q3BBV0 1214 aa16.34■□□□□ 0.21
CAPN1-217ENST00000529133 TMEM132EQ6IEE7 984 aa16.33■□□□□ 0.2
CAPN1-217ENST00000529133 DMRT2Q9Y5R5 561 aa16.33■□□□□ 0.2
CAPN1-217ENST00000529133 ROCK2O75116 1388 aaKnown RBP16.33■□□□□ 0.2
CAPN1-217ENST00000529133 GPRASP1Q5JY77 1395 aa16.33■□□□□ 0.2
CAPN1-217ENST00000529133 PIK3R4Q99570 1358 aa16.33■□□□□ 0.2
CAPN1-217ENST00000529133 PTPRUQ92729 1446 aa16.32■□□□□ 0.2
CAPN1-217ENST00000529133 NWD1Q149M9 1564 aa16.3■□□□□ 0.2
CAPN1-217ENST00000529133 YTHDC2Q9H6S0 1430 aaKnown RBP16.3■□□□□ 0.2
CAPN1-217ENST00000529133 LRPPRCP42704 1394 aaKnown RBP16.3■□□□□ 0.2
CAPN1-217ENST00000529133 XRN1Q8IZH2 1706 aaKnown RBP16.29■□□□□ 0.2
CAPN1-217ENST00000529133 TECPR2O15040 1411 aa16.28■□□□□ 0.2
CAPN1-217ENST00000529133 CARD11Q9BXL7 1154 aa16.27■□□□□ 0.2
CAPN1-217ENST00000529133 ABCC11Q96J66 1382 aa16.26■□□□□ 0.19
CAPN1-217ENST00000529133 CPS1P31327 1500 aa16.26■□□□□ 0.19
CAPN1-217ENST00000529133 KNDC1Q76NI1 1749 aa16.26■□□□□ 0.19
CAPN1-217ENST00000529133 KCNA6P17658 529 aa16.26■□□□□ 0.19
CAPN1-217ENST00000529133 STK26Q9P289 416 aa16.26■□□□□ 0.19
CAPN1-217ENST00000529133 AMOTL2Q9Y2J4 779 aa16.26■□□□□ 0.19
CAPN1-217ENST00000529133 DLC1Q96QB1 1528 aa16.25■□□□□ 0.19
CAPN1-217ENST00000529133 ZNF335Q9H4Z2 1342 aaPredicted RBP16.25■□□□□ 0.19
CAPN1-217ENST00000529133 CHD2O14647 1828 aaKnown RBP16.25■□□□□ 0.19
CAPN1-217ENST00000529133 PTCH1Q13635 1447 aa16.25■□□□□ 0.19
CAPN1-217ENST00000529133 NKTRP30414 1462 aaKnown RBP16.24■□□□□ 0.19
CAPN1-217ENST00000529133 TRAK1Q9UPV9 953 aa16.24■□□□□ 0.19
CAPN1-217ENST00000529133 ROBO2Q9HCK4 1378 aa16.24■□□□□ 0.19
CAPN1-217ENST00000529133 STRCP1A6NGW2 1772 aa16.23■□□□□ 0.19
CAPN1-217ENST00000529133 ARHGEF28Q8N1W1 1705 aaKnown RBP16.22■□□□□ 0.19
CAPN1-217ENST00000529133 USP47Q96K76 1375 aa16.22■□□□□ 0.19
CAPN1-217ENST00000529133 FAM135BQ49AJ0 1406 aa16.21■□□□□ 0.19
CAPN1-217ENST00000529133 EIF3AQ14152 1382 aaKnown RBP16.21■□□□□ 0.19
CAPN1-217ENST00000529133 SIRT1Q96EB6 747 aa16.2■□□□□ 0.18
CAPN1-217ENST00000529133 PLEKHH1Q9ULM0 1364 aa16.2■□□□□ 0.18
CAPN1-217ENST00000529133 LTBP4Q8N2S1 1624 aa16.19■□□□□ 0.18
CAPN1-217ENST00000529133 PRAM1Q96QH2 718 aa16.18■□□□□ 0.18
CAPN1-217ENST00000529133 WAPLQ7Z5K2 1190 aa16.17■□□□□ 0.18
CAPN1-217ENST00000529133 LRRC7Q96NW7 1537 aa16.17■□□□□ 0.18
CAPN1-217ENST00000529133 CENPJQ9HC77 1338 aaPredicted RBP16.17■□□□□ 0.18
CAPN1-217ENST00000529133 EIF4G2P78344 907 aaKnown RBP eCLIP16.16■□□□□ 0.18
CAPN1-217ENST00000529133 PROSER2Q86WR7 435 aaPredicted RBP16.16■□□□□ 0.18
CAPN1-217ENST00000529133 POGKQ9P215 609 aa16.16■□□□□ 0.18
CAPN1-217ENST00000529133 TMEM94Q12767 1356 aa16.15■□□□□ 0.18
CAPN1-217ENST00000529133 HSPA5P11021 654 aaKnown RBP16.15■□□□□ 0.18
CAPN1-217ENST00000529133 QRICH2Q9H0J4 1663 aa16.14■□□□□ 0.18
CAPN1-217ENST00000529133 ST20-MTHFSA0A0A6YYL1 179 aa16.14■□□□□ 0.17
CAPN1-217ENST00000529133 SAFB2Q14151 953 aaKnown RBP eCLIP16.14■□□□□ 0.17
CAPN1-217ENST00000529133 RBM33Q96EV2 1170 aaKnown RBP16.14■□□□□ 0.17
CAPN1-217ENST00000529133 ADGRL3Q9HAR2 1447 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms