RNA–Protein interactions for RNA: ENST00000528462.5

PACSIN3-205, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 1,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-205ENST00000528462 NEXMIFQ5QGS0 1516 aa31.7■■■□□ 2.67
PACSIN3-205ENST00000528462 ZEB1P37275 1124 aaPredicted RBP31.7■■■□□ 2.67
PACSIN3-205ENST00000528462 DCAF11Q8TEB1 546 aa31.68■■■□□ 2.66
PACSIN3-205ENST00000528462 IFT172Q9UG01 1749 aa31.68■■■□□ 2.66
PACSIN3-205ENST00000528462 MYOM2P54296 1465 aa31.67■■■□□ 2.66
PACSIN3-205ENST00000528462 LMTK3Q96Q04 1460 aa31.67■■■□□ 2.66
PACSIN3-205ENST00000528462 HDGFP51858 240 aaKnown RBP31.67■■■□□ 2.66
PACSIN3-205ENST00000528462 RIMS2Q9UQ26 1411 aa31.67■■■□□ 2.66
PACSIN3-205ENST00000528462 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.66■■■□□ 2.66
PACSIN3-205ENST00000528462 PPLO60437 1756 aa31.66■■■□□ 2.66
PACSIN3-205ENST00000528462 VGFO15240 615 aaPredicted RBP31.64■■■□□ 2.66
PACSIN3-205ENST00000528462 PPP1R15AO75807 674 aaPredicted RBP31.63■■■□□ 2.65
PACSIN3-205ENST00000528462 NRXN1Q9ULB1 1477 aa31.62■■■□□ 2.65
PACSIN3-205ENST00000528462 EID1Q9Y6B2 187 aa31.6■■■□□ 2.65
PACSIN3-205ENST00000528462 KDM2AQ9Y2K7 1162 aa31.59■■■□□ 2.65
PACSIN3-205ENST00000528462 PRAG1Q86YV5 1406 aa31.57■■■□□ 2.64
PACSIN3-205ENST00000528462 ADGRF5Q8IZF2 1346 aa31.56■■■□□ 2.64
PACSIN3-205ENST00000528462 LTKP29376 864 aa31.56■■■□□ 2.64
PACSIN3-205ENST00000528462 TXNDC2Q86VQ3 553 aa31.56■■■□□ 2.64
PACSIN3-205ENST00000528462 SCAF11Q99590 1463 aaKnown RBP31.56■■■□□ 2.64
PACSIN3-205ENST00000528462 ANKLE2Q86XL3 938 aa31.55■■■□□ 2.64
PACSIN3-205ENST00000528462 PIK3C2GO75747 1445 aa31.54■■■□□ 2.64
PACSIN3-205ENST00000528462 NUTM2DQ5VT03 806 aaPredicted RBP31.51■■■□□ 2.64
PACSIN3-205ENST00000528462 PLEKHG1Q9ULL1 1385 aa31.51■■■□□ 2.64
PACSIN3-205ENST00000528462 NBPF8Q3BBV2 869 aa31.49■■■□□ 2.63
PACSIN3-205ENST00000528462 MED14O60244 1454 aa31.48■■■□□ 2.63
PACSIN3-205ENST00000528462 HSPA2P54652 639 aa31.47■■■□□ 2.63
PACSIN3-205ENST00000528462 SETBP1Q9Y6X0 1596 aa31.47■■■□□ 2.63
PACSIN3-205ENST00000528462 C14orf93Q9H972 538 aaKnown RBP31.44■■■□□ 2.62
PACSIN3-205ENST00000528462 POLR1AO95602 1720 aaPredicted RBP31.43■■■□□ 2.62
PACSIN3-205ENST00000528462 KIAA1210Q9ULL0 1709 aa31.41■■■□□ 2.62
PACSIN3-205ENST00000528462 AEBP2Q6ZN18 517 aaPredicted RBP31.41■■■□□ 2.62
PACSIN3-205ENST00000528462 RALGAPBQ86X10 1494 aa31.41■■■□□ 2.62
PACSIN3-205ENST00000528462 NRXN3Q9Y4C0 1643 aa31.4■■■□□ 2.62
PACSIN3-205ENST00000528462 LAMC1P11047 1609 aa31.4■■■□□ 2.62
PACSIN3-205ENST00000528462 NCKAP5LQ9HCH0 1330 aa31.38■■■□□ 2.61
PACSIN3-205ENST00000528462 NPHP4O75161 1426 aaPredicted RBP31.38■■■□□ 2.61
PACSIN3-205ENST00000528462 ADAMTS13Q76LX8 1427 aa31.38■■■□□ 2.61
PACSIN3-205ENST00000528462 TRPM1Q7Z4N2 1603 aa31.38■■■□□ 2.61
PACSIN3-205ENST00000528462 ALKQ9UM73 1620 aa31.37■■■□□ 2.61
PACSIN3-205ENST00000528462 CFAP70Q5T0N1 1121 aa31.37■■■□□ 2.61
PACSIN3-205ENST00000528462 GPRASP1Q5JY77 1395 aa31.35■■■□□ 2.61
PACSIN3-205ENST00000528462 TBX22Q9Y458 520 aa31.35■■■□□ 2.61
PACSIN3-205ENST00000528462 DIP2AQ14689 1571 aa31.34■■■□□ 2.61
PACSIN3-205ENST00000528462 IQGAP1P46940 1657 aa31.34■■■□□ 2.61
PACSIN3-205ENST00000528462 STRCQ7RTU9 1775 aa31.34■■■□□ 2.61
PACSIN3-205ENST00000528462 BCANQ96GW7 911 aa31.32■■■□□ 2.6
PACSIN3-205ENST00000528462 SETD1AO15047 1707 aaKnown RBP31.32■■■□□ 2.6
PACSIN3-205ENST00000528462 NBPF1Q3BBV0 1214 aa31.31■■■□□ 2.6
PACSIN3-205ENST00000528462 ROCK2O75116 1388 aaKnown RBP31.31■■■□□ 2.6
PACSIN3-205ENST00000528462 ADGRB1O14514 1584 aa31.31■■■□□ 2.6
PACSIN3-205ENST00000528462 SLC26A8Q96RN1 970 aa31.28■■■□□ 2.6
PACSIN3-205ENST00000528462 PIK3R4Q99570 1358 aa31.27■■■□□ 2.6
PACSIN3-205ENST00000528462 ASXL1Q8IXJ9 1541 aa31.26■■■□□ 2.6
PACSIN3-205ENST00000528462 METP08581 1390 aa31.26■■■□□ 2.59
PACSIN3-205ENST00000528462 SENP3Q9H4L4 574 aaPredicted RBP31.26■■■□□ 2.59
PACSIN3-205ENST00000528462 DMRT2Q9Y5R5 561 aa31.24■■■□□ 2.59
PACSIN3-205ENST00000528462 CARD11Q9BXL7 1154 aa31.23■■■□□ 2.59
PACSIN3-205ENST00000528462 TMEM132EQ6IEE7 984 aa31.22■■■□□ 2.59
PACSIN3-205ENST00000528462 YTHDC2Q9H6S0 1430 aaKnown RBP31.19■■■□□ 2.58
PACSIN3-205ENST00000528462 LRPPRCP42704 1394 aaKnown RBP31.18■■■□□ 2.58
PACSIN3-205ENST00000528462 ABCC11Q96J66 1382 aa31.17■■■□□ 2.58
PACSIN3-205ENST00000528462 TECPR2O15040 1411 aa31.15■■■□□ 2.58
PACSIN3-205ENST00000528462 PTPRUQ92729 1446 aa31.14■■■□□ 2.58
PACSIN3-205ENST00000528462 USP47Q96K76 1375 aa31.11■■■□□ 2.57
PACSIN3-205ENST00000528462 DLC1Q96QB1 1528 aa31.11■■■□□ 2.57
PACSIN3-205ENST00000528462 SIRT1Q96EB6 747 aa31.1■■■□□ 2.57
PACSIN3-205ENST00000528462 CHD2O14647 1828 aaKnown RBP31.1■■■□□ 2.57
PACSIN3-205ENST00000528462 AMOTL2Q9Y2J4 779 aa31.09■■■□□ 2.57
PACSIN3-205ENST00000528462 KCNA6P17658 529 aa31.09■■■□□ 2.57
PACSIN3-205ENST00000528462 EIF4G2P78344 907 aaKnown RBP eCLIP31.09■■■□□ 2.57
PACSIN3-205ENST00000528462 EIF3AQ14152 1382 aaKnown RBP31.08■■■□□ 2.57
PACSIN3-205ENST00000528462 KNDC1Q76NI1 1749 aa31.08■■■□□ 2.57
PACSIN3-205ENST00000528462 XRN1Q8IZH2 1706 aaKnown RBP31.08■■■□□ 2.57
PACSIN3-205ENST00000528462 TRAK1Q9UPV9 953 aa31.08■■■□□ 2.57
PACSIN3-205ENST00000528462 NWD1Q149M9 1564 aa31.08■■■□□ 2.57
PACSIN3-205ENST00000528462 STK26Q9P289 416 aa31.07■■■□□ 2.56
PACSIN3-205ENST00000528462 PTCH1Q13635 1447 aa31.07■■■□□ 2.56
PACSIN3-205ENST00000528462 CPS1P31327 1500 aa31.06■■■□□ 2.56
PACSIN3-205ENST00000528462 FAM135BQ49AJ0 1406 aa31.06■■■□□ 2.56
PACSIN3-205ENST00000528462 ARHGEF28Q8N1W1 1705 aaKnown RBP31.02■■■□□ 2.56
PACSIN3-205ENST00000528462 ROBO2Q9HCK4 1378 aa31.01■■■□□ 2.55
PACSIN3-205ENST00000528462 NKTRP30414 1462 aaKnown RBP31.01■■■□□ 2.55
PACSIN3-205ENST00000528462 HSPA5P11021 654 aaKnown RBP31■■■□□ 2.55
PACSIN3-205ENST00000528462 ST20-MTHFSA0A0A6YYL1 179 aa30.99■■■□□ 2.55
PACSIN3-205ENST00000528462 CENPJQ9HC77 1338 aaPredicted RBP30.98■■■□□ 2.55
PACSIN3-205ENST00000528462 PRAM1Q96QH2 718 aa30.97■■■□□ 2.55
PACSIN3-205ENST00000528462 SBNO2Q9Y2G9 1366 aa30.97■■■□□ 2.55
PACSIN3-205ENST00000528462 SLC24A1O60721 1099 aa30.94■■■□□ 2.54
PACSIN3-205ENST00000528462 POGKQ9P215 609 aa30.94■■■□□ 2.54
PACSIN3-205ENST00000528462 ZNF335Q9H4Z2 1342 aaPredicted RBP30.93■■■□□ 2.54
PACSIN3-205ENST00000528462 STRCP1A6NGW2 1772 aa30.93■■■□□ 2.54
PACSIN3-205ENST00000528462 WAPLQ7Z5K2 1190 aa30.92■■■□□ 2.54
PACSIN3-205ENST00000528462 TESK2Q96S53 571 aa30.92■■■□□ 2.54
PACSIN3-205ENST00000528462 PLEKHH1Q9ULM0 1364 aa30.91■■■□□ 2.54
PACSIN3-205ENST00000528462 NCOA3Q9Y6Q9 1424 aa30.88■■■□□ 2.53
PACSIN3-205ENST00000528462 QRICH2Q9H0J4 1663 aa30.87■■■□□ 2.53
PACSIN3-205ENST00000528462 PROSER2Q86WR7 435 aaPredicted RBP30.86■■■□□ 2.53
PACSIN3-205ENST00000528462 SAFB2Q14151 953 aaKnown RBP eCLIP30.83■■■□□ 2.53
PACSIN3-205ENST00000528462 HIRIP3Q9BW71 556 aaPredicted RBP30.83■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms