RNA–Protein interactions for RNA: ENST00000527624.1

PCDHA6-202, Transcript of protocadherin alpha 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHA6, Length 2,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6-202ENST00000527624 SCAF11Q99590 1463 aaKnown RBP23.65■■□□□ 1.38
PCDHA6-202ENST00000527624 IQGAP1P46940 1657 aa23.64■■□□□ 1.38
PCDHA6-202ENST00000527624 NOS1P29475 1434 aa23.64■■□□□ 1.37
PCDHA6-202ENST00000527624 SIGLEC1Q9BZZ2 1709 aa23.63■■□□□ 1.37
PCDHA6-202ENST00000527624 IFT172Q9UG01 1749 aa23.61■■□□□ 1.37
PCDHA6-202ENST00000527624 KIAA1210Q9ULL0 1709 aa23.59■■□□□ 1.37
PCDHA6-202ENST00000527624 SYNMO15061 1565 aa23.58■■□□□ 1.37
PCDHA6-202ENST00000527624 NRXN1Q9ULB1 1477 aa23.58■■□□□ 1.37
PCDHA6-202ENST00000527624 ARHGAP31Q2M1Z3 1444 aa23.58■■□□□ 1.37
PCDHA6-202ENST00000527624 ZC3H13Q5T200 1668 aaKnown RBP23.58■■□□□ 1.36
PCDHA6-202ENST00000527624 EIF3AQ14152 1382 aaKnown RBP23.57■■□□□ 1.36
PCDHA6-202ENST00000527624 PANK3Q9H999 370 aa23.56■■□□□ 1.36
PCDHA6-202ENST00000527624 PER1O15534 1290 aaPredicted RBP23.55■■□□□ 1.36
PCDHA6-202ENST00000527624 KIF13AQ9H1H9 1805 aa23.54■■□□□ 1.36
PCDHA6-202ENST00000527624 NUTM2DQ5VT03 806 aaPredicted RBP23.53■■□□□ 1.36
PCDHA6-202ENST00000527624 IDI1Q13907 227 aa23.53■■□□□ 1.36
PCDHA6-202ENST00000527624 PIK3C2BO00750 1634 aa23.53■■□□□ 1.36
PCDHA6-202ENST00000527624 RALBP1Q15311 655 aa23.52■■□□□ 1.36
PCDHA6-202ENST00000527624 PPLO60437 1756 aa23.52■■□□□ 1.36
PCDHA6-202ENST00000527624 PIK3C2GO75747 1445 aa23.51■■□□□ 1.35
PCDHA6-202ENST00000527624 KTN1Q86UP2 1357 aaKnown RBP23.51■■□□□ 1.35
PCDHA6-202ENST00000527624 RPGRIP1LQ68CZ1 1315 aa23.51■■□□□ 1.35
PCDHA6-202ENST00000527624 MYBBP1AQ9BQG0 1328 aaKnown RBP23.51■■□□□ 1.35
PCDHA6-202ENST00000527624 TMC1Q8TDI8 760 aa23.51■■□□□ 1.35
PCDHA6-202ENST00000527624 FKBP8Q14318 412 aa23.49■■□□□ 1.35
PCDHA6-202ENST00000527624 FBXO31Q5XUX0 539 aaPredicted RBP23.49■■□□□ 1.35
PCDHA6-202ENST00000527624 CC2D1BQ5T0F9 858 aaKnown RBP23.49■■□□□ 1.35
PCDHA6-202ENST00000527624 MLECQ14165 292 aa23.48■■□□□ 1.35
PCDHA6-202ENST00000527624 CDCA8Q53HL2 280 aa23.48■■□□□ 1.35
PCDHA6-202ENST00000527624 C14orf93Q9H972 538 aaKnown RBP23.48■■□□□ 1.35
PCDHA6-202ENST00000527624 REREQ9P2R6 1566 aa23.47■■□□□ 1.35
PCDHA6-202ENST00000527624 SLC52A1Q9NWF4 448 aa23.47■■□□□ 1.35
PCDHA6-202ENST00000527624 PARD3Q8TEW0 1356 aa23.47■■□□□ 1.35
PCDHA6-202ENST00000527624 TMEM132EQ6IEE7 984 aa23.46■■□□□ 1.35
PCDHA6-202ENST00000527624 PREX1Q8TCU6 1659 aa23.46■■□□□ 1.35
PCDHA6-202ENST00000527624 AGLP35573 1532 aa23.46■■□□□ 1.35
PCDHA6-202ENST00000527624 PNISRQ8TF01 805 aaKnown RBP23.45■■□□□ 1.34
PCDHA6-202ENST00000527624 TRAK1Q9UPV9 953 aa23.44■■□□□ 1.34
PCDHA6-202ENST00000527624 NEXMIFQ5QGS0 1516 aa23.44■■□□□ 1.34
PCDHA6-202ENST00000527624 BRD4O60885 1362 aaPredicted RBP23.44■■□□□ 1.34
PCDHA6-202ENST00000527624 SENP3Q9H4L4 574 aaPredicted RBP23.44■■□□□ 1.34
PCDHA6-202ENST00000527624 SETBP1Q9Y6X0 1596 aa23.44■■□□□ 1.34
PCDHA6-202ENST00000527624 VGFO15240 615 aaPredicted RBP23.43■■□□□ 1.34
PCDHA6-202ENST00000527624 ZBED9Q6R2W3 1325 aa23.43■■□□□ 1.34
PCDHA6-202ENST00000527624 NEFLP07196 543 aa23.43■■□□□ 1.34
PCDHA6-202ENST00000527624 ARHGEF40Q8TER5 1519 aa23.41■■□□□ 1.34
PCDHA6-202ENST00000527624 ADGRB1O14514 1584 aa23.41■■□□□ 1.34
PCDHA6-202ENST00000527624 ERVK-7P63135 1459 aa23.41■■□□□ 1.34
PCDHA6-202ENST00000527624 NLRP13Q86W25 1043 aa23.4■■□□□ 1.34
PCDHA6-202ENST00000527624 CENPJQ9HC77 1338 aaPredicted RBP23.4■■□□□ 1.34
PCDHA6-202ENST00000527624 BCANQ96GW7 911 aa23.39■■□□□ 1.34
PCDHA6-202ENST00000527624 PPP6R1Q9UPN7 881 aa23.39■■□□□ 1.34
PCDHA6-202ENST00000527624 KNSTRNQ9Y448 316 aa23.39■■□□□ 1.33
PCDHA6-202ENST00000527624 SENP3-EIF4A1A0A087X0R7 540 aa23.38■■□□□ 1.33
PCDHA6-202ENST00000527624 CLTCQ00610 1675 aaKnown RBP23.38■■□□□ 1.33
PCDHA6-202ENST00000527624 TMEM131LA2VDJ0 1609 aa23.37■■□□□ 1.33
PCDHA6-202ENST00000527624 KDM5AP29375 1690 aaKnown RBP23.37■■□□□ 1.33
PCDHA6-202ENST00000527624 SLC24A1O60721 1099 aa23.36■■□□□ 1.33
PCDHA6-202ENST00000527624 MYOM1P52179 1685 aa23.36■■□□□ 1.33
PCDHA6-202ENST00000527624 MYO3AQ8NEV4 1616 aa23.36■■□□□ 1.33
PCDHA6-202ENST00000527624 MYO5BQ9ULV0 1848 aa23.36■■□□□ 1.33
PCDHA6-202ENST00000527624 SBNO2Q9Y2G9 1366 aa23.34■■□□□ 1.33
PCDHA6-202ENST00000527624 STAG3Q9UJ98 1225 aa23.34■■□□□ 1.33
PCDHA6-202ENST00000527624 LRPPRCP42704 1394 aaKnown RBP23.34■■□□□ 1.33
PCDHA6-202ENST00000527624 AMER1Q5JTC6 1135 aaPredicted RBP23.32■■□□□ 1.32
PCDHA6-202ENST00000527624 ZFYVE9O95405 1425 aa23.32■■□□□ 1.32
PCDHA6-202ENST00000527624 TSHZ2Q9NRE2 1034 aa23.31■■□□□ 1.32
PCDHA6-202ENST00000527624 ESF1Q9H501 851 aaKnown RBP23.29■■□□□ 1.32
PCDHA6-202ENST00000527624 QRICH2Q9H0J4 1663 aa23.29■■□□□ 1.32
PCDHA6-202ENST00000527624 STK26Q9P289 416 aa23.28■■□□□ 1.32
PCDHA6-202ENST00000527624 ASXL1Q8IXJ9 1541 aa23.27■■□□□ 1.32
PCDHA6-202ENST00000527624 SPATA31D1Q6ZQQ2 1576 aa23.27■■□□□ 1.32
PCDHA6-202ENST00000527624 SAFB2Q14151 953 aaKnown RBP eCLIP23.25■■□□□ 1.31
PCDHA6-202ENST00000527624 CARD14Q9BXL6 1004 aa23.24■■□□□ 1.31
PCDHA6-202ENST00000527624 ZMYM3Q14202 1370 aa23.24■■□□□ 1.31
PCDHA6-202ENST00000527624 PPP2R1AP30153 589 aa23.23■■□□□ 1.31
PCDHA6-202ENST00000527624 A2ML1A8K2U0 1454 aa23.23■■□□□ 1.31
PCDHA6-202ENST00000527624 ARHGEF28Q8N1W1 1705 aaKnown RBP23.22■■□□□ 1.31
PCDHA6-202ENST00000527624 IRX6P78412 446 aaPredicted RBP23.22■■□□□ 1.31
PCDHA6-202ENST00000527624 SLC12A5Q9H2X9 1139 aa23.2■■□□□ 1.3
PCDHA6-202ENST00000527624 NPC1L1Q9UHC9 1359 aa23.2■■□□□ 1.3
PCDHA6-202ENST00000527624 EVC2Q86UK5 1308 aa23.18■■□□□ 1.3
PCDHA6-202ENST00000527624 SALL2Q9Y467 1007 aaPredicted RBP23.18■■□□□ 1.3
PCDHA6-202ENST00000527624 RIMS2Q9UQ26 1411 aa23.17■■□□□ 1.3
PCDHA6-202ENST00000527624 SMG6Q86US8 1419 aaKnown RBP23.17■■□□□ 1.3
PCDHA6-202ENST00000527624 TULP4Q9NRJ4 1543 aa23.17■■□□□ 1.3
PCDHA6-202ENST00000527624 YTHDC2Q9H6S0 1430 aaKnown RBP23.16■■□□□ 1.3
PCDHA6-202ENST00000527624 ALKQ9UM73 1620 aa23.16■■□□□ 1.3
PCDHA6-202ENST00000527624 TRHP20396 242 aaPredicted RBP23.16■■□□□ 1.3
PCDHA6-202ENST00000527624 CABP2Q9NPB3 220 aa23.15■■□□□ 1.3
PCDHA6-202ENST00000527624 NUDCQ9Y266 331 aa23.15■■□□□ 1.3
PCDHA6-202ENST00000527624 PRAM1Q96QH2 718 aa23.14■■□□□ 1.3
PCDHA6-202ENST00000527624 NSD3Q9BZ95 1437 aa23.14■■□□□ 1.29
PCDHA6-202ENST00000527624 PTPRMP28827 1452 aa23.13■■□□□ 1.29
PCDHA6-202ENST00000527624 POGKQ9P215 609 aa23.12■■□□□ 1.29
PCDHA6-202ENST00000527624 MINK1Q8N4C8 1332 aaPredicted RBP23.12■■□□□ 1.29
PCDHA6-202ENST00000527624 TNRQ92752 1358 aa23.11■■□□□ 1.29
PCDHA6-202ENST00000527624 ADAMTS8Q9UP79 889 aa23.11■■□□□ 1.29
PCDHA6-202ENST00000527624 BLMP54132 1417 aaPredicted RBP23.11■■□□□ 1.29
PCDHA6-202ENST00000527624 SRPK2P78362 688 aaKnown RBP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms