RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 FNBP4Q8N3X1 1017 aaPredicted RBP11.89□□□□□ -0.51
VPS26B-204ENST00000527586 ADGBQ8N7X0 1667 aa11.89□□□□□ -0.51
VPS26B-204ENST00000527586 ERVK-7P63135 1459 aa11.89□□□□□ -0.51
VPS26B-204ENST00000527586 KIAA1107Q9UPP5 1409 aa11.88□□□□□ -0.51
VPS26B-204ENST00000527586 BAG6P46379 1132 aa11.87□□□□□ -0.51
VPS26B-204ENST00000527586 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.87□□□□□ -0.51
VPS26B-204ENST00000527586 TMEM2Q9UHN6 1383 aa11.87□□□□□ -0.51
VPS26B-204ENST00000527586 MAST1Q9Y2H9 1570 aa11.87□□□□□ -0.51
VPS26B-204ENST00000527586 BCANQ96GW7 911 aa11.86□□□□□ -0.51
VPS26B-204ENST00000527586 C19orf44Q9H6X5 657 aa11.86□□□□□ -0.51
VPS26B-204ENST00000527586 RTEL1-TNFRSF6BF6WH68 1400 aa11.86□□□□□ -0.51
VPS26B-204ENST00000527586 GJD4Q96KN9 370 aaPredicted RBP11.85□□□□□ -0.51
VPS26B-204ENST00000527586 NCOA3Q9Y6Q9 1424 aa11.85□□□□□ -0.51
VPS26B-204ENST00000527586 TET3O43151 1660 aa11.84□□□□□ -0.51
VPS26B-204ENST00000527586 PLEKHH2Q8IVE3 1493 aa11.83□□□□□ -0.52
VPS26B-204ENST00000527586 DDX17Q92841 729 aaKnown RBP11.83□□□□□ -0.52
VPS26B-204ENST00000527586 PPP1R1BQ9UD71 204 aaPredicted RBP11.83□□□□□ -0.52
VPS26B-204ENST00000527586 STAG3Q9UJ98 1225 aa11.83□□□□□ -0.52
VPS26B-204ENST00000527586 FMN1Q68DA7 1419 aa11.83□□□□□ -0.52
VPS26B-204ENST00000527586 CDC42BPAQ5VT25 1732 aa11.83□□□□□ -0.52
VPS26B-204ENST00000527586 CFDP1Q9UEE9 299 aaPredicted RBP11.82□□□□□ -0.52
VPS26B-204ENST00000527586 EN1Q05925 392 aaPredicted RBP11.81□□□□□ -0.52
VPS26B-204ENST00000527586 ASXL1Q8IXJ9 1541 aa11.81□□□□□ -0.52
VPS26B-204ENST00000527586 GPATCH8Q9UKJ3 1502 aaKnown RBP11.81□□□□□ -0.52
VPS26B-204ENST00000527586 UNC13BO14795 1591 aa11.8□□□□□ -0.52
VPS26B-204ENST00000527586 MROH1Q8NDA8 1641 aa11.8□□□□□ -0.52
VPS26B-204ENST00000527586 GIGYF1O75420 1035 aaPredicted RBP11.8□□□□□ -0.52
VPS26B-204ENST00000527586 CAPN15O75808 1086 aa11.8□□□□□ -0.52
VPS26B-204ENST00000527586 CSRNP3Q8WYN3 585 aa11.8□□□□□ -0.52
VPS26B-204ENST00000527586 ARHGAP35Q9NRY4 1499 aa11.79□□□□□ -0.52
VPS26B-204ENST00000527586 NINLQ9Y2I6 1382 aa11.79□□□□□ -0.52
VPS26B-204ENST00000527586 PTCH1Q13635 1447 aa11.78□□□□□ -0.52
VPS26B-204ENST00000527586 CAMSAP2Q08AD1 1489 aa11.78□□□□□ -0.52
VPS26B-204ENST00000527586 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.77□□□□□ -0.52
VPS26B-204ENST00000527586 PCDH10Q9P2E7 1040 aa11.77□□□□□ -0.53
VPS26B-204ENST00000527586 SEPT12Q8IYM1 358 aa11.76□□□□□ -0.53
VPS26B-204ENST00000527586 ZNF644Q9H582 1327 aaPredicted RBP11.75□□□□□ -0.53
VPS26B-204ENST00000527586 PPP1R15AO75807 674 aaPredicted RBP11.74□□□□□ -0.53
VPS26B-204ENST00000527586 KRT27Q7Z3Y8 459 aa11.74□□□□□ -0.53
VPS26B-204ENST00000527586 RALGAPBQ86X10 1494 aa11.74□□□□□ -0.53
VPS26B-204ENST00000527586 SPON1Q9HCB6 807 aa11.73□□□□□ -0.53
VPS26B-204ENST00000527586 CAMTA1Q9Y6Y1 1673 aa11.72□□□□□ -0.53
VPS26B-204ENST00000527586 MBD5Q9P267 1494 aa11.72□□□□□ -0.53
VPS26B-204ENST00000527586 EFCAB6Q5THR3 1501 aa11.71□□□□□ -0.53
VPS26B-204ENST00000527586 EZH2Q15910 746 aaKnown RBP11.71□□□□□ -0.53
VPS26B-204ENST00000527586 UTRNP46939 3433 aa11.71□□□□□ -0.54
VPS26B-204ENST00000527586 PIK3C2BO00750 1634 aa11.71□□□□□ -0.54
VPS26B-204ENST00000527586 MST1RQ04912 1400 aa11.7□□□□□ -0.54
VPS26B-204ENST00000527586 UNC5CLQ8IV45 518 aa11.7□□□□□ -0.54
VPS26B-204ENST00000527586 GLI3P10071 1580 aa11.7□□□□□ -0.54
VPS26B-204ENST00000527586 LRRIQ1Q96JM4 1722 aa11.69□□□□□ -0.54
VPS26B-204ENST00000527586 CCNB3Q8WWL7 1395 aa11.69□□□□□ -0.54
VPS26B-204ENST00000527586 KCNQ2O43526 872 aa11.69□□□□□ -0.54
VPS26B-204ENST00000527586 IDI1Q13907 227 aa11.69□□□□□ -0.54
VPS26B-204ENST00000527586 CHD2O14647 1828 aaKnown RBP11.69□□□□□ -0.54
VPS26B-204ENST00000527586 SPHKAPQ2M3C7 1700 aa11.69□□□□□ -0.54
VPS26B-204ENST00000527586 CFAP65Q6ZU64 1925 aaKnown RBP11.68□□□□□ -0.54
VPS26B-204ENST00000527586 TBX22Q9Y458 520 aa11.68□□□□□ -0.54
VPS26B-204ENST00000527586 DCCP43146 1447 aa11.68□□□□□ -0.54
VPS26B-204ENST00000527586 BRWD3Q6RI45 1802 aa11.67□□□□□ -0.54
VPS26B-204ENST00000527586 PRELPP51888 382 aa11.67□□□□□ -0.54
VPS26B-204ENST00000527586 CCDC18Q5T9S5 1454 aa11.67□□□□□ -0.54
VPS26B-204ENST00000527586 PLEKHG1Q9ULL1 1385 aa11.67□□□□□ -0.54
VPS26B-204ENST00000527586 SOS2Q07890 1332 aaPredicted RBP11.64□□□□□ -0.55
VPS26B-204ENST00000527586 ONECUT3O60422 494 aaPredicted RBP11.64□□□□□ -0.55
VPS26B-204ENST00000527586 CAMKK2Q96RR4 588 aa11.64□□□□□ -0.55
VPS26B-204ENST00000527586 DISP2A7MBM2 1401 aa11.63□□□□□ -0.55
VPS26B-204ENST00000527586 ARHGAP31Q2M1Z3 1444 aa11.63□□□□□ -0.55
VPS26B-204ENST00000527586 A0A0G2JS52 829 aa11.63□□□□□ -0.55
VPS26B-204ENST00000527586 MYT1Q01538 1121 aa11.63□□□□□ -0.55
VPS26B-204ENST00000527586 AMOTL2Q9Y2J4 779 aa11.63□□□□□ -0.55
VPS26B-204ENST00000527586 MYOM2P54296 1465 aa11.63□□□□□ -0.55
VPS26B-204ENST00000527586 HSPA6P17066 643 aa11.62□□□□□ -0.55
VPS26B-204ENST00000527586 COL13A1Q5TAT6 717 aaPredicted RBP11.62□□□□□ -0.55
VPS26B-204ENST00000527586 CCDC9Q9Y3X0 531 aaKnown RBP11.62□□□□□ -0.55
VPS26B-204ENST00000527586 NBPF8Q3BBV2 869 aa11.61□□□□□ -0.55
VPS26B-204ENST00000527586 NBPF14Q5TI25 921 aa11.61□□□□□ -0.55
VPS26B-204ENST00000527586 CCDC141Q6ZP82 1450 aa11.6□□□□□ -0.55
VPS26B-204ENST00000527586 FAM182BQ5T319 152 aa11.6□□□□□ -0.55
VPS26B-204ENST00000527586 MTUS2Q5JR59 1369 aa11.59□□□□□ -0.55
VPS26B-204ENST00000527586 HDGFP51858 240 aaKnown RBP11.59□□□□□ -0.55
VPS26B-204ENST00000527586 VPS72Q15906 364 aa11.59□□□□□ -0.55
VPS26B-204ENST00000527586 CEP152O94986 1710 aa11.59□□□□□ -0.55
VPS26B-204ENST00000527586 SLIT2O94813 1529 aa11.59□□□□□ -0.55
VPS26B-204ENST00000527586 PIK3R4Q99570 1358 aa11.58□□□□□ -0.56
VPS26B-204ENST00000527586 RSPH4AQ5TD94 716 aa11.58□□□□□ -0.56
VPS26B-204ENST00000527586 TNS4Q8IZW8 715 aa11.58□□□□□ -0.56
VPS26B-204ENST00000527586 CASKIN1Q8WXD9 1431 aa11.58□□□□□ -0.56
VPS26B-204ENST00000527586 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.57□□□□□ -0.56
VPS26B-204ENST00000527586 FAM83GA6ND36 823 aa11.57□□□□□ -0.56
VPS26B-204ENST00000527586 TSPY4P0CV99 314 aa11.57□□□□□ -0.56
VPS26B-204ENST00000527586 TSPY10P0CW01 314 aa11.57□□□□□ -0.56
VPS26B-204ENST00000527586 ORAI2Q96SN7 254 aa11.57□□□□□ -0.56
VPS26B-204ENST00000527586 ZFYVE9O95405 1425 aa11.57□□□□□ -0.56
VPS26B-204ENST00000527586 ADAMTS13Q76LX8 1427 aa11.57□□□□□ -0.56
VPS26B-204ENST00000527586 COL22A1Q8NFW1 1626 aaPredicted RBP11.57□□□□□ -0.56
VPS26B-204ENST00000527586 APBA3O96018 575 aa11.56□□□□□ -0.56
VPS26B-204ENST00000527586 RGPD1P0DJD0 1748 aa11.56□□□□□ -0.56
VPS26B-204ENST00000527586 PTPRUQ92729 1446 aa11.56□□□□□ -0.56
VPS26B-204ENST00000527586 RIMS2Q9UQ26 1411 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms