RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 PHF23Q9BUL5 403 aaPredicted RBP16.53■□□□□ 0.24
CAPN1-208ENST00000527323 PLIN1O60240 522 aa16.52■□□□□ 0.24
CAPN1-208ENST00000527323 CC2D1BQ5T0F9 858 aaKnown RBP16.52■□□□□ 0.24
CAPN1-208ENST00000527323 DNAJC5Q9H3Z4 198 aa16.52■□□□□ 0.24
CAPN1-208ENST00000527323 A2MP01023 1474 aa16.52■□□□□ 0.24
CAPN1-208ENST00000527323 CEBPAP49715 358 aaPredicted RBP16.51■□□□□ 0.23
CAPN1-208ENST00000527323 NEFMP07197 916 aa16.5■□□□□ 0.23
CAPN1-208ENST00000527323 KANK1Q14678 1352 aa16.49■□□□□ 0.23
CAPN1-208ENST00000527323 BACH2Q9BYV9 841 aa16.49■□□□□ 0.23
CAPN1-208ENST00000527323 ERBINQ96RT1 1412 aa16.48■□□□□ 0.23
CAPN1-208ENST00000527323 MS4A1P11836 297 aa16.47■□□□□ 0.23
CAPN1-208ENST00000527323 AMER1Q5JTC6 1135 aaPredicted RBP16.47■□□□□ 0.23
CAPN1-208ENST00000527323 RTEL1-TNFRSF6BF6WH68 1400 aa16.47■□□□□ 0.23
CAPN1-208ENST00000527323 MAP3K4Q9Y6R4 1608 aa16.46■□□□□ 0.23
CAPN1-208ENST00000527323 MAST1Q9Y2H9 1570 aa16.46■□□□□ 0.23
CAPN1-208ENST00000527323 ABCA6Q8N139 1617 aa16.46■□□□□ 0.23
CAPN1-208ENST00000527323 PLXNC1O60486 1568 aa16.46■□□□□ 0.23
CAPN1-208ENST00000527323 INO80Q9ULG1 1556 aaPredicted RBP16.46■□□□□ 0.23
CAPN1-208ENST00000527323 CRBNQ96SW2 442 aa16.45■□□□□ 0.22
CAPN1-208ENST00000527323 ARAP3Q8WWN8 1544 aa16.45■□□□□ 0.22
CAPN1-208ENST00000527323 SKAP1Q86WV1 359 aa16.45■□□□□ 0.22
CAPN1-208ENST00000527323 NEO1Q92859 1461 aa16.44■□□□□ 0.22
CAPN1-208ENST00000527323 KIF13AQ9H1H9 1805 aa16.44■□□□□ 0.22
CAPN1-208ENST00000527323 PANK3Q9H999 370 aa16.44■□□□□ 0.22
CAPN1-208ENST00000527323 PER1O15534 1290 aaPredicted RBP16.43■□□□□ 0.22
CAPN1-208ENST00000527323 PARD3Q8TEW0 1356 aa16.43■□□□□ 0.22
CAPN1-208ENST00000527323 TMEM132EQ6IEE7 984 aa16.43■□□□□ 0.22
CAPN1-208ENST00000527323 FRMPD1Q5SYB0 1578 aa16.43■□□□□ 0.22
CAPN1-208ENST00000527323 SAFB2Q14151 953 aaKnown RBP eCLIP16.42■□□□□ 0.22
CAPN1-208ENST00000527323 PPM1GO15355 546 aaPredicted RBP16.42■□□□□ 0.22
CAPN1-208ENST00000527323 ESF1Q9H501 851 aaKnown RBP16.42■□□□□ 0.22
CAPN1-208ENST00000527323 HECW2Q9P2P5 1572 aa16.42■□□□□ 0.22
CAPN1-208ENST00000527323 CFAP70Q5T0N1 1121 aa16.42■□□□□ 0.22
CAPN1-208ENST00000527323 STAG3Q9UJ98 1225 aa16.42■□□□□ 0.22
CAPN1-208ENST00000527323 PPRC1Q5VV67 1664 aaKnown RBP16.41■□□□□ 0.22
CAPN1-208ENST00000527323 IDI1Q13907 227 aa16.41■□□□□ 0.22
CAPN1-208ENST00000527323 ADGRF5Q8IZF2 1346 aa16.41■□□□□ 0.22
CAPN1-208ENST00000527323 TULP1O00294 542 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-208ENST00000527323 MLH3Q9UHC1 1453 aa16.4■□□□□ 0.22
CAPN1-208ENST00000527323 DDRGK1Q96HY6 314 aa16.39■□□□□ 0.21
CAPN1-208ENST00000527323 USP35Q9P2H5 1018 aa16.39■□□□□ 0.21
CAPN1-208ENST00000527323 ATP10AO60312 1499 aa16.39■□□□□ 0.21
CAPN1-208ENST00000527323 CEP152O94986 1710 aa16.39■□□□□ 0.21
CAPN1-208ENST00000527323 E9PCH4 1651 aa16.39■□□□□ 0.21
CAPN1-208ENST00000527323 NPATQ14207 1427 aa16.38■□□□□ 0.21
CAPN1-208ENST00000527323 TMF1P82094 1093 aa16.38■□□□□ 0.21
CAPN1-208ENST00000527323 RICTORQ6R327 1708 aa16.37■□□□□ 0.21
CAPN1-208ENST00000527323 UNC13BO14795 1591 aa16.37■□□□□ 0.21
CAPN1-208ENST00000527323 DIP2CQ9Y2E4 1556 aa16.37■□□□□ 0.21
CAPN1-208ENST00000527323 IL27Q8NEV9 243 aa16.37■□□□□ 0.21
CAPN1-208ENST00000527323 STK26Q9P289 416 aa16.37■□□□□ 0.21
CAPN1-208ENST00000527323 PRDM15P57071 1507 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-208ENST00000527323 C20orf194Q5TEA3 1177 aa16.36■□□□□ 0.21
CAPN1-208ENST00000527323 ADAMTS8Q9UP79 889 aa16.36■□□□□ 0.21
CAPN1-208ENST00000527323 PRAG1Q86YV5 1406 aa16.35■□□□□ 0.21
CAPN1-208ENST00000527323 IQGAP3Q86VI3 1631 aa16.35■□□□□ 0.21
CAPN1-208ENST00000527323 MROH1Q8NDA8 1641 aa16.35■□□□□ 0.21
CAPN1-208ENST00000527323 WDR43Q15061 677 aaKnown RBP eCLIP16.35■□□□□ 0.21
CAPN1-208ENST00000527323 DISP3Q9P2K9 1392 aa16.34■□□□□ 0.21
CAPN1-208ENST00000527323 KDM5DQ9BY66 1539 aa16.34■□□□□ 0.21
CAPN1-208ENST00000527323 SLC4A3P48751 1232 aa16.34■□□□□ 0.21
CAPN1-208ENST00000527323 TESK2Q96S53 571 aa16.34■□□□□ 0.21
CAPN1-208ENST00000527323 GLI2P10070 1586 aa16.34■□□□□ 0.21
CAPN1-208ENST00000527323 SIGLEC1Q9BZZ2 1709 aa16.33■□□□□ 0.21
CAPN1-208ENST00000527323 TRAK1Q9UPV9 953 aa16.33■□□□□ 0.21
CAPN1-208ENST00000527323 KNSTRNQ9Y448 316 aa16.32■□□□□ 0.2
CAPN1-208ENST00000527323 CFAP74Q9C0B2 1584 aa16.32■□□□□ 0.2
CAPN1-208ENST00000527323 MAGI2Q86UL8 1455 aa16.3■□□□□ 0.2
CAPN1-208ENST00000527323 CLTCL1P53675 1640 aa16.3■□□□□ 0.2
CAPN1-208ENST00000527323 CENPQQ7L2Z9 268 aaPredicted RBP16.29■□□□□ 0.2
CAPN1-208ENST00000527323 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.29■□□□□ 0.2
CAPN1-208ENST00000527323 RGS3P49796 1198 aa16.28■□□□□ 0.2
CAPN1-208ENST00000527323 NOS1P29475 1434 aa16.28■□□□□ 0.2
CAPN1-208ENST00000527323 BLMP54132 1417 aaPredicted RBP16.28■□□□□ 0.2
CAPN1-208ENST00000527323 GOLGA2Q08379 1002 aa16.27■□□□□ 0.2
CAPN1-208ENST00000527323 ANO8Q9HCE9 1232 aaPredicted RBP16.27■□□□□ 0.19
CAPN1-208ENST00000527323 ABCC3O15438 1527 aa16.27■□□□□ 0.19
CAPN1-208ENST00000527323 GPRASP1Q5JY77 1395 aa16.26■□□□□ 0.19
CAPN1-208ENST00000527323 PPP2R1AP30153 589 aa16.26■□□□□ 0.19
CAPN1-208ENST00000527323 NFKBIBQ15653 356 aa16.26■□□□□ 0.19
CAPN1-208ENST00000527323 DUSP27Q5VZP5 1158 aa16.25■□□□□ 0.19
CAPN1-208ENST00000527323 FAM161AQ3B820 660 aa16.25■□□□□ 0.19
CAPN1-208ENST00000527323 GSE1Q14687 1217 aa16.24■□□□□ 0.19
CAPN1-208ENST00000527323 KLHL34Q8N239 644 aa16.24■□□□□ 0.19
CAPN1-208ENST00000527323 INSRP06213 1382 aa16.24■□□□□ 0.19
CAPN1-208ENST00000527323 KDM2BQ8NHM5 1336 aa16.23■□□□□ 0.19
CAPN1-208ENST00000527323 CCDC146Q8IYE0 955 aa16.23■□□□□ 0.19
CAPN1-208ENST00000527323 EFCAB6Q5THR3 1501 aa16.23■□□□□ 0.19
CAPN1-208ENST00000527323 DEPDC5O75140 1603 aa16.23■□□□□ 0.19
CAPN1-208ENST00000527323 TRPM1Q7Z4N2 1603 aa16.23■□□□□ 0.19
CAPN1-208ENST00000527323 TET3O43151 1660 aa16.23■□□□□ 0.19
CAPN1-208ENST00000527323 PLEKHH1Q9ULM0 1364 aa16.23■□□□□ 0.19
CAPN1-208ENST00000527323 SPHKAPQ2M3C7 1700 aa16.22■□□□□ 0.19
CAPN1-208ENST00000527323 PTPRTO14522 1441 aa16.22■□□□□ 0.19
CAPN1-208ENST00000527323 ZMYM3Q14202 1370 aa16.22■□□□□ 0.19
CAPN1-208ENST00000527323 ZMYM4Q5VZL5 1548 aa16.21■□□□□ 0.19
CAPN1-208ENST00000527323 CDCA8Q53HL2 280 aa16.2■□□□□ 0.18
CAPN1-208ENST00000527323 VWDEQ8N2E2 1590 aa16.2■□□□□ 0.18
CAPN1-208ENST00000527323 RNF17Q9BXT8 1623 aaKnown RBP16.19■□□□□ 0.18
CAPN1-208ENST00000527323 RBM33Q96EV2 1170 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms