RNA–Protein interactions for RNA: ENST00000527104.5

NUP98-214, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-214ENST00000527104 UPF1Q92900 1129 aaKnown RBP eCLIP11.79□□□□□ -0.52
NUP98-214ENST00000527104 LRP6O75581 1613 aa11.78□□□□□ -0.52
NUP98-214ENST00000527104 COL16A1Q07092 1604 aaPredicted RBP11.78□□□□□ -0.52
NUP98-214ENST00000527104 FGD6Q6ZV73 1430 aa11.78□□□□□ -0.52
NUP98-214ENST00000527104 LMTK2Q8IWU2 1503 aa11.78□□□□□ -0.52
NUP98-214ENST00000527104 KANK4Q5T7N3 995 aaPredicted RBP11.78□□□□□ -0.52
NUP98-214ENST00000527104 ABCC5O15440 1437 aa11.77□□□□□ -0.52
NUP98-214ENST00000527104 DAPK1P53355 1430 aa11.77□□□□□ -0.52
NUP98-214ENST00000527104 ANKRD30AQ9BXX3 1397 aa11.77□□□□□ -0.53
NUP98-214ENST00000527104 PTPN23Q9H3S7 1636 aa11.76□□□□□ -0.53
NUP98-214ENST00000527104 RXRBP28702 533 aa11.76□□□□□ -0.53
NUP98-214ENST00000527104 HDGFP51858 240 aaKnown RBP11.76□□□□□ -0.53
NUP98-214ENST00000527104 SLC52A1Q9NWF4 448 aa11.76□□□□□ -0.53
NUP98-214ENST00000527104 PLEKHG1Q9ULL1 1385 aa11.76□□□□□ -0.53
NUP98-214ENST00000527104 NOS1P29475 1434 aa11.76□□□□□ -0.53
NUP98-214ENST00000527104 NUTM2BA6NNL0 878 aaPredicted RBP11.75□□□□□ -0.53
NUP98-214ENST00000527104 NUTM2EB1AL46 878 aaPredicted RBP11.75□□□□□ -0.53
NUP98-214ENST00000527104 ATF3P18847 181 aa11.75□□□□□ -0.53
NUP98-214ENST00000527104 NUTM2AQ8IVF1 878 aaPredicted RBP11.75□□□□□ -0.53
NUP98-214ENST00000527104 CHIC2Q9UKJ5 165 aa11.75□□□□□ -0.53
NUP98-214ENST00000527104 CADPS2Q86UW7 1296 aa11.74□□□□□ -0.53
NUP98-214ENST00000527104 RIMS2Q9UQ26 1411 aa11.74□□□□□ -0.53
NUP98-214ENST00000527104 ZFYVE9O95405 1425 aa11.73□□□□□ -0.53
NUP98-214ENST00000527104 CHGAP10645 457 aaKnown RBP11.73□□□□□ -0.53
NUP98-214ENST00000527104 APLP2Q06481 763 aa11.73□□□□□ -0.53
NUP98-214ENST00000527104 SHPRHQ149N8 1683 aa11.73□□□□□ -0.53
NUP98-214ENST00000527104 AHDC1Q5TGY3 1603 aaPredicted RBP11.73□□□□□ -0.53
NUP98-214ENST00000527104 NCOA3Q9Y6Q9 1424 aa11.73□□□□□ -0.53
NUP98-214ENST00000527104 RPRD2Q5VT52 1461 aaKnown RBP11.71□□□□□ -0.53
NUP98-214ENST00000527104 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.71□□□□□ -0.53
NUP98-214ENST00000527104 GCC2Q8IWJ2 1684 aa11.71□□□□□ -0.54
NUP98-214ENST00000527104 CDK12Q9NYV4 1490 aaPredicted RBP11.7□□□□□ -0.54
NUP98-214ENST00000527104 CHD2O14647 1828 aaKnown RBP11.7□□□□□ -0.54
NUP98-214ENST00000527104 AFF2P51816 1311 aa11.7□□□□□ -0.54
NUP98-214ENST00000527104 C19orf44Q9H6X5 657 aa11.7□□□□□ -0.54
NUP98-214ENST00000527104 TBX22Q9Y458 520 aa11.7□□□□□ -0.54
NUP98-214ENST00000527104 DIP2AQ14689 1571 aa11.7□□□□□ -0.54
NUP98-214ENST00000527104 NUTM2DQ5VT03 806 aaPredicted RBP11.69□□□□□ -0.54
NUP98-214ENST00000527104 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.69□□□□□ -0.54
NUP98-214ENST00000527104 BRINP3Q76B58 766 aa11.68□□□□□ -0.54
NUP98-214ENST00000527104 TMEM131LA2VDJ0 1609 aa11.68□□□□□ -0.54
NUP98-214ENST00000527104 PIK3R4Q99570 1358 aa11.67□□□□□ -0.54
NUP98-214ENST00000527104 TRPM2O94759 1503 aa11.67□□□□□ -0.54
NUP98-214ENST00000527104 C8orf37Q96NL8 207 aa11.67□□□□□ -0.54
NUP98-214ENST00000527104 ASXL1Q8IXJ9 1541 aa11.66□□□□□ -0.54
NUP98-214ENST00000527104 RGS12O14924 1447 aa11.66□□□□□ -0.54
NUP98-214ENST00000527104 ADAMTS13Q76LX8 1427 aa11.66□□□□□ -0.54
NUP98-214ENST00000527104 ANKRD50Q9ULJ7 1429 aa11.66□□□□□ -0.54
NUP98-214ENST00000527104 MYO5BQ9ULV0 1848 aa11.65□□□□□ -0.54
NUP98-214ENST00000527104 AMOTL2Q9Y2J4 779 aa11.65□□□□□ -0.54
NUP98-214ENST00000527104 DCCP43146 1447 aa11.65□□□□□ -0.54
NUP98-214ENST00000527104 ADGRL2O95490 1459 aa11.64□□□□□ -0.55
NUP98-214ENST00000527104 RBM6P78332 1123 aaKnown RBP11.64□□□□□ -0.55
NUP98-214ENST00000527104 FAM50AQ14320 339 aaKnown RBP11.64□□□□□ -0.55
NUP98-214ENST00000527104 FOXD1Q16676 465 aa11.64□□□□□ -0.55
NUP98-214ENST00000527104 LRRC59Q96AG4 307 aaKnown RBP11.64□□□□□ -0.55
NUP98-214ENST00000527104 SETD5Q9C0A6 1442 aa11.63□□□□□ -0.55
NUP98-214ENST00000527104 QTRT2Q9H974 415 aaKnown RBP11.63□□□□□ -0.55
NUP98-214ENST00000527104 LOC105371045A0A1W2PR82 267 aa11.62□□□□□ -0.55
NUP98-214ENST00000527104 NGLY1Q96IV0 654 aa11.62□□□□□ -0.55
NUP98-214ENST00000527104 ATAD2Q6PL18 1390 aa11.62□□□□□ -0.55
NUP98-214ENST00000527104 MST1RQ04912 1400 aa11.61□□□□□ -0.55
NUP98-214ENST00000527104 PNPLA6Q8IY17 1366 aa11.61□□□□□ -0.55
NUP98-214ENST00000527104 PTPRUQ92729 1446 aa11.6□□□□□ -0.55
NUP98-214ENST00000527104 UNC13BO14795 1591 aa11.6□□□□□ -0.55
NUP98-214ENST00000527104 ADAMTS2O95450 1211 aa11.6□□□□□ -0.55
NUP98-214ENST00000527104 NHSL1Q5SYE7 1610 aa11.6□□□□□ -0.55
NUP98-214ENST00000527104 ZRANB1Q9UGI0 708 aa11.59□□□□□ -0.55
NUP98-214ENST00000527104 ZNF326Q5BKZ1 582 aaKnown RBP11.58□□□□□ -0.56
NUP98-214ENST00000527104 DDX17Q92841 729 aaKnown RBP11.58□□□□□ -0.56
NUP98-214ENST00000527104 E9PCH4 1651 aa11.58□□□□□ -0.56
NUP98-214ENST00000527104 XRN1Q8IZH2 1706 aaKnown RBP11.57□□□□□ -0.56
NUP98-214ENST00000527104 SRCAPQ6ZRS2 3230 aa11.57□□□□□ -0.56
NUP98-214ENST00000527104 ADGRL3Q9HAR2 1447 aa11.57□□□□□ -0.56
NUP98-214ENST00000527104 USP21Q9UK80 565 aa11.56□□□□□ -0.56
NUP98-214ENST00000527104 SETBP1Q9Y6X0 1596 aa11.55□□□□□ -0.56
NUP98-214ENST00000527104 TRPC5Q9UL62 973 aaPredicted RBP11.55□□□□□ -0.56
NUP98-214ENST00000527104 IQGAP3Q86VI3 1631 aa11.54□□□□□ -0.56
NUP98-214ENST00000527104 NUP155O75694 1391 aa11.54□□□□□ -0.56
NUP98-214ENST00000527104 METP08581 1390 aa11.54□□□□□ -0.56
NUP98-214ENST00000527104 NRXN3Q9Y4C0 1643 aa11.53□□□□□ -0.56
NUP98-214ENST00000527104 NALCNQ8IZF0 1738 aa11.53□□□□□ -0.56
NUP98-214ENST00000527104 C1orf167Q5SNV9 1468 aa11.52□□□□□ -0.56
NUP98-214ENST00000527104 PTCH1Q13635 1447 aa11.52□□□□□ -0.57
NUP98-214ENST00000527104 CCDC125Q86Z20 511 aa11.5□□□□□ -0.57
NUP98-214ENST00000527104 ATRNO75882 1429 aa11.5□□□□□ -0.57
NUP98-214ENST00000527104 ORAI2Q96SN7 254 aa11.49□□□□□ -0.57
NUP98-214ENST00000527104 ROCK1Q13464 1354 aa11.49□□□□□ -0.57
NUP98-214ENST00000527104 ITGAEP38570 1179 aa11.48□□□□□ -0.57
NUP98-214ENST00000527104 SOS2Q07890 1332 aaPredicted RBP11.48□□□□□ -0.57
NUP98-214ENST00000527104 SPHKAPQ2M3C7 1700 aa11.47□□□□□ -0.57
NUP98-214ENST00000527104 FNBP4Q8N3X1 1017 aaPredicted RBP11.47□□□□□ -0.57
NUP98-214ENST00000527104 LAMC1P11047 1609 aa11.46□□□□□ -0.57
NUP98-214ENST00000527104 COL22A1Q8NFW1 1626 aaPredicted RBP11.46□□□□□ -0.58
NUP98-214ENST00000527104 NEXMIFQ5QGS0 1516 aa11.45□□□□□ -0.58
NUP98-214ENST00000527104 NPHP3Q7Z494 1330 aa11.45□□□□□ -0.58
NUP98-214ENST00000527104 SF3B2Q13435 895 aaKnown RBP11.45□□□□□ -0.58
NUP98-214ENST00000527104 MYOM2P54296 1465 aa11.44□□□□□ -0.58
NUP98-214ENST00000527104 ROBO2Q9HCK4 1378 aa11.44□□□□□ -0.58
NUP98-214ENST00000527104 ESCO1Q5FWF5 840 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms