RNA–Protein interactions for RNA: ENST00000527104.5

NUP98-214, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-214ENST00000527104 NISCHQ9Y2I1 1504 aa19.06■□□□□ 0.64
NUP98-214ENST00000527104 ABCC9O60706 1549 aa17.59■□□□□ 0.41
NUP98-214ENST00000527104 CCDC180Q9P1Z9 1646 aa17.25■□□□□ 0.35
NUP98-214ENST00000527104 DNAJC5BQ9UF47 199 aa16.68■□□□□ 0.26
NUP98-214ENST00000527104 RB1CC1Q8TDY2 1594 aa16.6■□□□□ 0.25
NUP98-214ENST00000527104 NACADO15069 1562 aa16.38■□□□□ 0.21
NUP98-214ENST00000527104 DCAF8L2P0C7V8 631 aa16.32■□□□□ 0.2
NUP98-214ENST00000527104 PABPN1Q86U42 306 aaKnown RBP eCLIP16.32■□□□□ 0.2
NUP98-214ENST00000527104 UNC13AQ9UPW8 1703 aa16.13■□□□□ 0.17
NUP98-214ENST00000527104 BICRAQ9NZM4 1560 aa16.05■□□□□ 0.16
NUP98-214ENST00000527104 MYO15BQ96JP2 1530 aa16.02■□□□□ 0.15
NUP98-214ENST00000527104 CECR2Q9BXF3 1484 aa15.88■□□□□ 0.13
NUP98-214ENST00000527104 SHROOM4Q9ULL8 1493 aa15.87■□□□□ 0.13
NUP98-214ENST00000527104 CC2D2AQ9P2K1 1620 aa15.85■□□□□ 0.13
NUP98-214ENST00000527104 SCRIBQ14160 1630 aa15.75■□□□□ 0.11
NUP98-214ENST00000527104 ZCCHC6Q5VYS8 1495 aaKnown RBP15.74■□□□□ 0.11
NUP98-214ENST00000527104 EIF4G1Q04637 1599 aaKnown RBP15.74■□□□□ 0.11
NUP98-214ENST00000527104 DCAF1Q9Y4B6 1507 aa15.7■□□□□ 0.1
NUP98-214ENST00000527104 DNAJC5Q9H3Z4 198 aa15.57■□□□□ 0.08
NUP98-214ENST00000527104 CUX2O14529 1486 aa15.27■□□□□ 0.04
NUP98-214ENST00000527104 ERCC6Q03468 1493 aa15.27■□□□□ 0.03
NUP98-214ENST00000527104 NCAPD3P42695 1498 aa15.1■□□□□ 0.01
NUP98-214ENST00000527104 ATAD2BQ9ULI0 1458 aa15.03■□□□□ -0
NUP98-214ENST00000527104 SMARCA2P51531 1590 aa15□□□□□ -0.01
NUP98-214ENST00000527104 HMGXB3Q12766 1538 aa15□□□□□ -0.01
NUP98-214ENST00000527104 NESP48681 1621 aa14.99□□□□□ -0.01
NUP98-214ENST00000527104 SMARCA4P51532 1647 aa14.95□□□□□ -0.02
NUP98-214ENST00000527104 BAZ1BQ9UIG0 1483 aaKnown RBP14.92□□□□□ -0.02
NUP98-214ENST00000527104 THOC2Q8NI27 1593 aaKnown RBP14.9□□□□□ -0.02
NUP98-214ENST00000527104 TRIM41Q8WV44 630 aa14.87□□□□□ -0.03
NUP98-214ENST00000527104 BAZ1AQ9NRL2 1556 aaPredicted RBP14.85□□□□□ -0.03
NUP98-214ENST00000527104 LAMC3Q9Y6N6 1575 aa14.85□□□□□ -0.03
NUP98-214ENST00000527104 PDS5BQ9NTI5 1447 aa14.8□□□□□ -0.04
NUP98-214ENST00000527104 KIF21AQ7Z4S6 1674 aa14.78□□□□□ -0.04
NUP98-214ENST00000527104 PEG3Q9GZU2 1588 aa14.77□□□□□ -0.05
NUP98-214ENST00000527104 MRC2Q9UBG0 1479 aa14.69□□□□□ -0.06
NUP98-214ENST00000527104 MROH2BQ7Z745 1585 aa14.68□□□□□ -0.06
NUP98-214ENST00000527104 CADPSQ9ULU8 1353 aa14.65□□□□□ -0.06
NUP98-214ENST00000527104 WDR62O43379 1518 aa14.64□□□□□ -0.07
NUP98-214ENST00000527104 AEBP2Q6ZN18 517 aaPredicted RBP14.62□□□□□ -0.07
NUP98-214ENST00000527104 CEP164Q9UPV0 1460 aa14.58□□□□□ -0.08
NUP98-214ENST00000527104 CHIC1Q5VXU3 224 aa14.54□□□□□ -0.08
NUP98-214ENST00000527104 FANCD2Q9BXW9 1451 aa14.52□□□□□ -0.08
NUP98-214ENST00000527104 OSCARQ8IYS5 282 aa14.52□□□□□ -0.09
NUP98-214ENST00000527104 WIZO95785 1651 aa14.49□□□□□ -0.09
NUP98-214ENST00000527104 CFTRP13569 1480 aa14.41□□□□□ -0.1
NUP98-214ENST00000527104 URB2Q14146 1524 aaKnown RBP14.39□□□□□ -0.11
NUP98-214ENST00000527104 RIMBP3CA6NJZ7 1639 aa14.37□□□□□ -0.11
NUP98-214ENST00000527104 RIMBP3BA6NNM3 1639 aa14.37□□□□□ -0.11
NUP98-214ENST00000527104 RIMBP3Q9UFD9 1639 aa14.37□□□□□ -0.11
NUP98-214ENST00000527104 TOP2AP11388 1531 aaKnown RBP14.32□□□□□ -0.12
NUP98-214ENST00000527104 ARHGEF11O15085 1522 aa14.31□□□□□ -0.12
NUP98-214ENST00000527104 IFT140Q96RY7 1462 aa14.28□□□□□ -0.12
NUP98-214ENST00000527104 ZNF608Q9ULD9 1512 aaPredicted RBP14.27□□□□□ -0.12
NUP98-214ENST00000527104 RSF1Q96T23 1441 aaPredicted RBP14.26□□□□□ -0.13
NUP98-214ENST00000527104 PRDM2Q13029 1718 aa14.23□□□□□ -0.13
NUP98-214ENST00000527104 TRHP20396 242 aaPredicted RBP14.22□□□□□ -0.13
NUP98-214ENST00000527104 CYB5RLQ6IPT4 315 aa14.22□□□□□ -0.13
NUP98-214ENST00000527104 EIF4G3O43432 1585 aaKnown RBP14.2□□□□□ -0.14
NUP98-214ENST00000527104 TOPBP1Q92547 1522 aa14.2□□□□□ -0.14
NUP98-214ENST00000527104 FBLN2P98095 1184 aa14.15□□□□□ -0.14
NUP98-214ENST00000527104 ABCC8Q09428 1581 aa14.14□□□□□ -0.15
NUP98-214ENST00000527104 CCDC88BA6NC98 1476 aa14.14□□□□□ -0.15
NUP98-214ENST00000527104 DNMBPQ6XZF7 1577 aa14.13□□□□□ -0.15
NUP98-214ENST00000527104 CHD1O14646 1710 aa14.12□□□□□ -0.15
NUP98-214ENST00000527104 ARAP1Q96P48 1450 aa14.12□□□□□ -0.15
NUP98-214ENST00000527104 AQRO60306 1485 aaKnown RBP eCLIP14.11□□□□□ -0.15
NUP98-214ENST00000527104 TARBP1Q13395 1621 aaKnown RBP14.06□□□□□ -0.16
NUP98-214ENST00000527104 POLA1P09884 1462 aaPredicted RBP14.03□□□□□ -0.16
NUP98-214ENST00000527104 SNAPC4Q5SXM2 1469 aa13.99□□□□□ -0.17
NUP98-214ENST00000527104 RAD54L2Q9Y4B4 1467 aa13.99□□□□□ -0.17
NUP98-214ENST00000527104 TDRD9Q8NDG6 1382 aaKnown RBP13.98□□□□□ -0.17
NUP98-214ENST00000527104 SOGA1O94964 1423 aa13.97□□□□□ -0.17
NUP98-214ENST00000527104 SYNJ1O43426 1573 aa13.96□□□□□ -0.17
NUP98-214ENST00000527104 CHMP7Q8WUX9 453 aaPredicted RBP13.96□□□□□ -0.17
NUP98-214ENST00000527104 CLASP1Q7Z460 1538 aa13.95□□□□□ -0.18
NUP98-214ENST00000527104 WDR97A6NE52 1622 aa13.92□□□□□ -0.18
NUP98-214ENST00000527104 MAGI1Q96QZ7 1491 aaPredicted RBP13.92□□□□□ -0.18
NUP98-214ENST00000527104 FGD5Q6ZNL6 1462 aa13.91□□□□□ -0.18
NUP98-214ENST00000527104 GRIN2BQ13224 1484 aa13.89□□□□□ -0.19
NUP98-214ENST00000527104 SYNJ2O15056 1496 aa13.87□□□□□ -0.19
NUP98-214ENST00000527104 GAPVD1Q14C86 1478 aa13.86□□□□□ -0.19
NUP98-214ENST00000527104 CUX1P39880 1505 aa13.82□□□□□ -0.2
NUP98-214ENST00000527104 PBRM1Q86U86 1689 aa13.8□□□□□ -0.2
NUP98-214ENST00000527104 ABCA5Q8WWZ7 1642 aa13.72□□□□□ -0.21
NUP98-214ENST00000527104 ERCC6L2Q5T890 1561 aa13.71□□□□□ -0.21
NUP98-214ENST00000527104 ABCA10Q8WWZ4 1543 aa13.71□□□□□ -0.21
NUP98-214ENST00000527104 GRIN2AQ12879 1464 aa13.71□□□□□ -0.21
NUP98-214ENST00000527104 CEP170Q5SW79 1584 aa13.68□□□□□ -0.22
NUP98-214ENST00000527104 ADAMTS12P58397 1594 aa13.66□□□□□ -0.22
NUP98-214ENST00000527104 NUP160Q12769 1436 aa13.64□□□□□ -0.23
NUP98-214ENST00000527104 WRNQ14191 1432 aaPredicted RBP eCLIP13.63□□□□□ -0.23
NUP98-214ENST00000527104 FHAD1B1AJZ9 1412 aa13.61□□□□□ -0.23
NUP98-214ENST00000527104 SHROOM2Q13796 1616 aa13.61□□□□□ -0.23
NUP98-214ENST00000527104 PRG4Q92954 1404 aaPredicted RBP13.58□□□□□ -0.24
NUP98-214ENST00000527104 KIF13AQ9H1H9 1805 aa13.57□□□□□ -0.24
NUP98-214ENST00000527104 NPM1P06748 294 aaKnown RBP eCLIP13.56□□□□□ -0.24
NUP98-214ENST00000527104 FAM69CQ0P6D2 419 aa13.55□□□□□ -0.24
NUP98-214ENST00000527104 ERICH3Q5RHP9 1530 aa13.54□□□□□ -0.24
NUP98-214ENST00000527104 ABCC10Q5T3U5 1492 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms