RNA–Protein interactions for RNA: ENST00000525975.5

HIPK3-204, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-204ENST00000525975 COG6Q9Y2V7 657 aa5.94□□□□□ -1.46
HIPK3-204ENST00000525975 CCDC173Q0VFZ6 552 aa5.94□□□□□ -1.46
HIPK3-204ENST00000525975 ZSCAN30Q86W11 494 aa5.94□□□□□ -1.46
HIPK3-204ENST00000525975 ZNF777Q9ULD5 760 aaPredicted RBP5.94□□□□□ -1.46
HIPK3-204ENST00000525975 R3HCC1Q9Y3T6 440 aaKnown RBP5.94□□□□□ -1.46
HIPK3-204ENST00000525975 GOLGA6L22H0YM25 854 aa5.94□□□□□ -1.46
HIPK3-204ENST00000525975 PMFBP1Q8TBY8 1022 aa5.94□□□□□ -1.46
HIPK3-204ENST00000525975 GAPVD1Q14C86 1478 aa5.93□□□□□ -1.46
HIPK3-204ENST00000525975 MBD5Q9P267 1494 aa5.93□□□□□ -1.46
HIPK3-204ENST00000525975 HSP90AB1P08238 724 aaKnown RBP5.93□□□□□ -1.46
HIPK3-204ENST00000525975 NASPP49321 788 aaPredicted RBP5.93□□□□□ -1.46
HIPK3-204ENST00000525975 CCDC146Q8IYE0 955 aa5.93□□□□□ -1.46
HIPK3-204ENST00000525975 BBXQ8WY36 941 aaPredicted RBP5.93□□□□□ -1.46
HIPK3-204ENST00000525975 INSRP06213 1382 aa5.93□□□□□ -1.46
HIPK3-204ENST00000525975 TDRD9Q8NDG6 1382 aaKnown RBP5.93□□□□□ -1.46
HIPK3-204ENST00000525975 TNNT2P45379 298 aaPredicted RBP5.93□□□□□ -1.46
HIPK3-204ENST00000525975 SKOR2Q2VWA4 1001 aaPredicted RBP5.93□□□□□ -1.46
HIPK3-204ENST00000525975 C22orf23Q9BZE7 217 aa5.93□□□□□ -1.46
HIPK3-204ENST00000525975 KNSTRNQ9Y448 316 aa5.93□□□□□ -1.46
HIPK3-204ENST00000525975 ZNF644Q9H582 1327 aaPredicted RBP5.93□□□□□ -1.46
HIPK3-204ENST00000525975 PLEKHH1Q9ULM0 1364 aa5.93□□□□□ -1.46
HIPK3-204ENST00000525975 PTMSP20962 102 aa5.93□□□□□ -1.46
HIPK3-204ENST00000525975 PANK1Q8TE04 598 aa5.93□□□□□ -1.46
HIPK3-204ENST00000525975 NPM1P06748 294 aaKnown RBP eCLIP5.92□□□□□ -1.46
HIPK3-204ENST00000525975 SLFN5Q08AF3 891 aa5.92□□□□□ -1.46
HIPK3-204ENST00000525975 AAMPQ13685 434 aa5.92□□□□□ -1.46
HIPK3-204ENST00000525975 ABCC5O15440 1437 aa5.92□□□□□ -1.46
HIPK3-204ENST00000525975 OFD1O75665 1012 aa5.92□□□□□ -1.46
HIPK3-204ENST00000525975 MYCNP04198 464 aaPredicted RBP5.92□□□□□ -1.46
HIPK3-204ENST00000525975 TMF1P82094 1093 aa5.92□□□□□ -1.46
HIPK3-204ENST00000525975 MTERF4Q7Z6M4 381 aaKnown RBP5.92□□□□□ -1.46
HIPK3-204ENST00000525975 ARHGEF11O15085 1522 aa5.92□□□□□ -1.46
HIPK3-204ENST00000525975 MAGI3Q5TCQ9 1506 aa5.92□□□□□ -1.46
HIPK3-204ENST00000525975 MAPK8IP2Q13387 824 aaPredicted RBP5.92□□□□□ -1.46
HIPK3-204ENST00000525975 PDE3AQ14432 1141 aa5.92□□□□□ -1.46
HIPK3-204ENST00000525975 PDZRN3Q9UPQ7 1066 aa5.92□□□□□ -1.46
HIPK3-204ENST00000525975 PZPP20742 1482 aa5.91□□□□□ -1.46
HIPK3-204ENST00000525975 ADAMTS12P58397 1594 aa5.91□□□□□ -1.46
HIPK3-204ENST00000525975 UQCRHLA0A096LP55 91 aa5.91□□□□□ -1.46
HIPK3-204ENST00000525975 E9PSI1 815 aa5.91□□□□□ -1.46
HIPK3-204ENST00000525975 PER1O15534 1290 aaPredicted RBP5.91□□□□□ -1.46
HIPK3-204ENST00000525975 UQCRHP07919 91 aa5.91□□□□□ -1.46
HIPK3-204ENST00000525975 RGL3Q3MIN7 710 aa5.91□□□□□ -1.46
HIPK3-204ENST00000525975 RWDD1Q9H446 243 aaPredicted RBP5.91□□□□□ -1.46
HIPK3-204ENST00000525975 PRDM10Q9NQV6 1147 aa5.91□□□□□ -1.46
HIPK3-204ENST00000525975 PRDM4Q9UKN5 801 aa5.91□□□□□ -1.46
HIPK3-204ENST00000525975 ZHX1Q9UKY1 873 aaPredicted RBP5.91□□□□□ -1.46
HIPK3-204ENST00000525975 UHRF1BP1Q6BDS2 1440 aa5.91□□□□□ -1.46
HIPK3-204ENST00000525975 NUP155O75694 1391 aa5.91□□□□□ -1.46
HIPK3-204ENST00000525975 APAF1O14727 1248 aa5.91□□□□□ -1.46
HIPK3-204ENST00000525975 NCLP19338 710 aaKnown RBP5.91□□□□□ -1.46
HIPK3-204ENST00000525975 CFDP1Q9UEE9 299 aaPredicted RBP5.91□□□□□ -1.46
HIPK3-204ENST00000525975 NKTRP30414 1462 aaKnown RBP5.91□□□□□ -1.46
HIPK3-204ENST00000525975 LRRIQ1Q96JM4 1722 aa5.9□□□□□ -1.46
HIPK3-204ENST00000525975 ZNF608Q9ULD9 1512 aaPredicted RBP5.9□□□□□ -1.46
HIPK3-204ENST00000525975 GAS2L3Q86XJ1 694 aa5.9□□□□□ -1.46
HIPK3-204ENST00000525975 SMAP1Q8IYB5 467 aaPredicted RBP5.9□□□□□ -1.46
HIPK3-204ENST00000525975 EIF4G3O43432 1585 aaKnown RBP5.9□□□□□ -1.47
HIPK3-204ENST00000525975 PPP2R1AP30153 589 aa5.9□□□□□ -1.47
HIPK3-204ENST00000525975 TNPO1Q92973 898 aaKnown RBP5.9□□□□□ -1.47
HIPK3-204ENST00000525975 CDK13Q14004 1512 aaKnown RBP5.9□□□□□ -1.47
HIPK3-204ENST00000525975 NINLQ9Y2I6 1382 aa5.9□□□□□ -1.47
HIPK3-204ENST00000525975 VIRMAQ69YN4 1812 aaKnown RBP5.89□□□□□ -1.47
HIPK3-204ENST00000525975 TERF1P54274 439 aa5.89□□□□□ -1.47
HIPK3-204ENST00000525975 RIPK4P57078 832 aa5.89□□□□□ -1.47
HIPK3-204ENST00000525975 DDX49Q9Y6V7 483 aaKnown RBP5.89□□□□□ -1.47
HIPK3-204ENST00000525975 EPRSP07814 1512 aaKnown RBP5.89□□□□□ -1.47
HIPK3-204ENST00000525975 SAMD9Q5K651 1589 aa5.89□□□□□ -1.47
HIPK3-204ENST00000525975 FGD1P98174 961 aa5.89□□□□□ -1.47
HIPK3-204ENST00000525975 ANKRD30AQ9BXX3 1397 aa5.89□□□□□ -1.47
HIPK3-204ENST00000525975 IFT140Q96RY7 1462 aa5.89□□□□□ -1.47
HIPK3-204ENST00000525975 NLRP1Q9C000 1473 aa5.89□□□□□ -1.47
HIPK3-204ENST00000525975 XPCQ01831 940 aaPredicted RBP5.88□□□□□ -1.47
HIPK3-204ENST00000525975 CSPP1Q1MSJ5 1256 aa5.88□□□□□ -1.47
HIPK3-204ENST00000525975 DNTTIP2Q5QJE6 756 aaKnown RBP5.88□□□□□ -1.47
HIPK3-204ENST00000525975 IFNLR1Q8IU57 520 aaPredicted RBP5.88□□□□□ -1.47
HIPK3-204ENST00000525975 ERCC6Q03468 1493 aa5.88□□□□□ -1.47
HIPK3-204ENST00000525975 ARHGEF12Q9NZN5 1544 aa5.88□□□□□ -1.47
HIPK3-204ENST00000525975 NBPF1Q3BBV0 1214 aa5.88□□□□□ -1.47
HIPK3-204ENST00000525975 CIZ1Q9ULV3 898 aaPredicted RBP5.88□□□□□ -1.47
HIPK3-204ENST00000525975 DNMT1P26358 1616 aaKnown RBP5.88□□□□□ -1.47
HIPK3-204ENST00000525975 ZNF521Q96K83 1311 aa5.88□□□□□ -1.47
HIPK3-204ENST00000525975 PDE4CQ08493 712 aa5.88□□□□□ -1.47
HIPK3-204ENST00000525975 NEUROD2Q15784 382 aa5.88□□□□□ -1.47
HIPK3-204ENST00000525975 FTSJ3Q8IY81 847 aaKnown RBP5.88□□□□□ -1.47
HIPK3-204ENST00000525975 SPINK5Q9NQ38 1064 aaPredicted RBP5.88□□□□□ -1.47
HIPK3-204ENST00000525975 E9PCH4 1651 aa5.88□□□□□ -1.47
HIPK3-204ENST00000525975 DISP3Q9P2K9 1392 aa5.87□□□□□ -1.47
HIPK3-204ENST00000525975 DYNC1I1O14576 645 aa5.87□□□□□ -1.47
HIPK3-204ENST00000525975 PTMAP06454 111 aaKnown RBP5.87□□□□□ -1.47
HIPK3-204ENST00000525975 PPP1R9BQ96SB3 815 aa5.87□□□□□ -1.47
HIPK3-204ENST00000525975 BCL2L13Q9BXK5 485 aa5.87□□□□□ -1.47
HIPK3-204ENST00000525975 ANKRD50Q9ULJ7 1429 aa5.87□□□□□ -1.47
HIPK3-204ENST00000525975 ZBTB7CA1YPR0 619 aa5.87□□□□□ -1.47
HIPK3-204ENST00000525975 PCDHB15Q9Y5E8 787 aa5.87□□□□□ -1.47
HIPK3-204ENST00000525975 KIAA0586Q9BVV6 1533 aa5.87□□□□□ -1.47
HIPK3-204ENST00000525975 ERBINQ96RT1 1412 aa5.86□□□□□ -1.47
HIPK3-204ENST00000525975 ZMYM3Q14202 1370 aa5.86□□□□□ -1.47
HIPK3-204ENST00000525975 COL17A1Q9UMD9 1497 aaPredicted RBP5.86□□□□□ -1.47
HIPK3-204ENST00000525975 RAB3GAP1Q15042 981 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms