RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 RTN4Q9NQC3 1192 aaKnown RBP11.05□□□□□ -0.64
CHD7-202ENST00000524602 VWDEQ8N2E2 1590 aa11.04□□□□□ -0.64
CHD7-202ENST00000524602 SCAF11Q99590 1463 aaKnown RBP11.04□□□□□ -0.64
CHD7-202ENST00000524602 NOP58Q9Y2X3 529 aaKnown RBP11.03□□□□□ -0.64
CHD7-202ENST00000524602 CLTCL1P53675 1640 aa11.03□□□□□ -0.64
CHD7-202ENST00000524602 ANP32AP39687 249 aaKnown RBP11.03□□□□□ -0.64
CHD7-202ENST00000524602 TCERG1O14776 1098 aaKnown RBP11.02□□□□□ -0.65
CHD7-202ENST00000524602 EIF3AQ14152 1382 aaKnown RBP11.02□□□□□ -0.65
CHD7-202ENST00000524602 NPC1L1Q9UHC9 1359 aa11.02□□□□□ -0.65
CHD7-202ENST00000524602 CC2D1BQ5T0F9 858 aaKnown RBP11.01□□□□□ -0.65
CHD7-202ENST00000524602 KIDINS220Q9ULH0 1771 aa11.01□□□□□ -0.65
CHD7-202ENST00000524602 CD109Q6YHK3 1445 aa11.01□□□□□ -0.65
CHD7-202ENST00000524602 KANK1Q14678 1352 aa11.01□□□□□ -0.65
CHD7-202ENST00000524602 MYOM1P52179 1685 aa11□□□□□ -0.65
CHD7-202ENST00000524602 ASXL1Q8IXJ9 1541 aa11□□□□□ -0.65
CHD7-202ENST00000524602 IPO9Q96P70 1041 aaKnown RBP11□□□□□ -0.65
CHD7-202ENST00000524602 CFAP74Q9C0B2 1584 aa11□□□□□ -0.65
CHD7-202ENST00000524602 KDM5AP29375 1690 aaKnown RBP11□□□□□ -0.65
CHD7-202ENST00000524602 MS4A1P11836 297 aa11□□□□□ -0.65
CHD7-202ENST00000524602 PIK3C2GO75747 1445 aa10.99□□□□□ -0.65
CHD7-202ENST00000524602 EXOC6Q8TAG9 804 aa10.99□□□□□ -0.65
CHD7-202ENST00000524602 KNSTRNQ9Y448 316 aa10.99□□□□□ -0.65
CHD7-202ENST00000524602 MYOM2P54296 1465 aa10.99□□□□□ -0.65
CHD7-202ENST00000524602 ZNF518AQ6AHZ1 1483 aa10.99□□□□□ -0.65
CHD7-202ENST00000524602 MROH1Q8NDA8 1641 aa10.97□□□□□ -0.65
CHD7-202ENST00000524602 MAP3K4Q9Y6R4 1608 aa10.97□□□□□ -0.65
CHD7-202ENST00000524602 KIF3BO15066 747 aa10.97□□□□□ -0.65
CHD7-202ENST00000524602 IFT172Q9UG01 1749 aa10.97□□□□□ -0.65
CHD7-202ENST00000524602 KIF1BO60333 1816 aa10.97□□□□□ -0.65
CHD7-202ENST00000524602 AMER1Q5JTC6 1135 aaPredicted RBP10.96□□□□□ -0.65
CHD7-202ENST00000524602 POGZQ7Z3K3 1410 aa10.96□□□□□ -0.65
CHD7-202ENST00000524602 PPP2R1AP30153 589 aa10.96□□□□□ -0.66
CHD7-202ENST00000524602 CDCA7LQ96GN5 454 aa10.96□□□□□ -0.66
CHD7-202ENST00000524602 SALL2Q9Y467 1007 aaPredicted RBP10.96□□□□□ -0.66
CHD7-202ENST00000524602 MYO3AQ8NEV4 1616 aa10.96□□□□□ -0.66
CHD7-202ENST00000524602 RIMBP3CA6NJZ7 1639 aa10.95□□□□□ -0.66
CHD7-202ENST00000524602 RIMBP3BA6NNM3 1639 aa10.95□□□□□ -0.66
CHD7-202ENST00000524602 RIMBP3Q9UFD9 1639 aa10.95□□□□□ -0.66
CHD7-202ENST00000524602 DEKP35659 375 aaKnown RBP10.95□□□□□ -0.66
CHD7-202ENST00000524602 WDR43Q15061 677 aaKnown RBP eCLIP10.95□□□□□ -0.66
CHD7-202ENST00000524602 CYB5RLQ6IPT4 315 aa10.95□□□□□ -0.66
CHD7-202ENST00000524602 EFCAB6Q5THR3 1501 aa10.95□□□□□ -0.66
CHD7-202ENST00000524602 LMTK2Q8IWU2 1503 aa10.95□□□□□ -0.66
CHD7-202ENST00000524602 ADAMTS8Q9UP79 889 aa10.94□□□□□ -0.66
CHD7-202ENST00000524602 ABCA6Q8N139 1617 aa10.94□□□□□ -0.66
CHD7-202ENST00000524602 ZBTB47Q9UFB7 747 aaPredicted RBP10.94□□□□□ -0.66
CHD7-202ENST00000524602 HECW2Q9P2P5 1572 aa10.94□□□□□ -0.66
CHD7-202ENST00000524602 NBR1Q14596 966 aa10.94□□□□□ -0.66
CHD7-202ENST00000524602 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.94□□□□□ -0.66
CHD7-202ENST00000524602 ZNF521Q96K83 1311 aa10.93□□□□□ -0.66
CHD7-202ENST00000524602 NRXN1Q9ULB1 1477 aa10.93□□□□□ -0.66
CHD7-202ENST00000524602 NGEFQ8N5V2 710 aa10.93□□□□□ -0.66
CHD7-202ENST00000524602 SBNO2Q9Y2G9 1366 aa10.92□□□□□ -0.66
CHD7-202ENST00000524602 SETBP1Q9Y6X0 1596 aa10.92□□□□□ -0.66
CHD7-202ENST00000524602 MLH3Q9UHC1 1453 aa10.92□□□□□ -0.66
CHD7-202ENST00000524602 BACH2Q9BYV9 841 aa10.92□□□□□ -0.66
CHD7-202ENST00000524602 FRMPD1Q5SYB0 1578 aa10.92□□□□□ -0.66
CHD7-202ENST00000524602 NEO1Q92859 1461 aa10.92□□□□□ -0.66
CHD7-202ENST00000524602 PAK3O75914 559 aaPredicted RBP10.92□□□□□ -0.66
CHD7-202ENST00000524602 PDE4AP27815 886 aa10.91□□□□□ -0.66
CHD7-202ENST00000524602 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.91□□□□□ -0.66
CHD7-202ENST00000524602 PPRC1Q5VV67 1664 aaKnown RBP10.91□□□□□ -0.66
CHD7-202ENST00000524602 PLEKHH1Q9ULM0 1364 aa10.91□□□□□ -0.66
CHD7-202ENST00000524602 ERVK-7P63135 1459 aa10.91□□□□□ -0.66
CHD7-202ENST00000524602 GOLGA2Q08379 1002 aa10.9□□□□□ -0.66
CHD7-202ENST00000524602 DUSP27Q5VZP5 1158 aa10.9□□□□□ -0.66
CHD7-202ENST00000524602 CRBNQ96SW2 442 aa10.9□□□□□ -0.66
CHD7-202ENST00000524602 RAPGEF3O95398 923 aa10.9□□□□□ -0.66
CHD7-202ENST00000524602 ADGRB3O60242 1522 aa10.89□□□□□ -0.67
CHD7-202ENST00000524602 MROH2AA6NES4 1674 aa10.89□□□□□ -0.67
CHD7-202ENST00000524602 RICTORQ6R327 1708 aa10.89□□□□□ -0.67
CHD7-202ENST00000524602 UGGT1Q9NYU2 1555 aa10.89□□□□□ -0.67
CHD7-202ENST00000524602 TRMT2AQ8IZ69 625 aaKnown RBP10.88□□□□□ -0.67
CHD7-202ENST00000524602 PLIN1O60240 522 aa10.88□□□□□ -0.67
CHD7-202ENST00000524602 CENPQQ7L2Z9 268 aaPredicted RBP10.88□□□□□ -0.67
CHD7-202ENST00000524602 KDM2BQ8NHM5 1336 aa10.88□□□□□ -0.67
CHD7-202ENST00000524602 ZC3H13Q5T200 1668 aaKnown RBP10.88□□□□□ -0.67
CHD7-202ENST00000524602 SLFN5Q08AF3 891 aa10.88□□□□□ -0.67
CHD7-202ENST00000524602 GLI2P10070 1586 aa10.87□□□□□ -0.67
CHD7-202ENST00000524602 NKTRP30414 1462 aaKnown RBP10.87□□□□□ -0.67
CHD7-202ENST00000524602 CFAP65Q6ZU64 1925 aaKnown RBP10.87□□□□□ -0.67
CHD7-202ENST00000524602 USP32Q8NFA0 1604 aa10.86□□□□□ -0.67
CHD7-202ENST00000524602 PPLO60437 1756 aa10.86□□□□□ -0.67
CHD7-202ENST00000524602 DIP2CQ9Y2E4 1556 aa10.86□□□□□ -0.67
CHD7-202ENST00000524602 GGT6Q6P531 493 aa10.86□□□□□ -0.67
CHD7-202ENST00000524602 DDRGK1Q96HY6 314 aa10.86□□□□□ -0.67
CHD7-202ENST00000524602 POLR3AO14802 1390 aaPredicted RBP10.85□□□□□ -0.67
CHD7-202ENST00000524602 DIP2BQ9P265 1576 aa10.85□□□□□ -0.67
CHD7-202ENST00000524602 RTL5Q5HYW3 569 aaPredicted RBP10.85□□□□□ -0.67
CHD7-202ENST00000524602 NINLQ9Y2I6 1382 aa10.85□□□□□ -0.67
CHD7-202ENST00000524602 ADGRF5Q8IZF2 1346 aa10.85□□□□□ -0.67
CHD7-202ENST00000524602 CFAP70Q5T0N1 1121 aa10.85□□□□□ -0.67
CHD7-202ENST00000524602 TSPOAP1O95153 1857 aa10.85□□□□□ -0.67
CHD7-202ENST00000524602 E9PSI1 815 aa10.84□□□□□ -0.67
CHD7-202ENST00000524602 QRICH2Q9H0J4 1663 aa10.84□□□□□ -0.67
CHD7-202ENST00000524602 USP35Q9P2H5 1018 aa10.83□□□□□ -0.67
CHD7-202ENST00000524602 NPATQ14207 1427 aa10.83□□□□□ -0.68
CHD7-202ENST00000524602 FAM69CQ0P6D2 419 aa10.83□□□□□ -0.68
CHD7-202ENST00000524602 C20orf194Q5TEA3 1177 aa10.83□□□□□ -0.68
CHD7-202ENST00000524602 ABCC3O15438 1527 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms