RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 FOXD1Q16676 465 aa22.32■■□□□ 1.16
SF3B2-202ENST00000524475 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.32■■□□□ 1.16
SF3B2-202ENST00000524475 CHGAP10645 457 aaKnown RBP22.31■■□□□ 1.16
SF3B2-202ENST00000524475 LTBP4Q8N2S1 1624 aa22.31■■□□□ 1.16
SF3B2-202ENST00000524475 PLEKHG1Q9ULL1 1385 aa22.3■■□□□ 1.16
SF3B2-202ENST00000524475 ANKRD30BQ9BXX2 1392 aa22.28■■□□□ 1.16
SF3B2-202ENST00000524475 NEXMIFQ5QGS0 1516 aa22.28■■□□□ 1.16
SF3B2-202ENST00000524475 SPATA31E1Q6ZUB1 1445 aa22.27■■□□□ 1.16
SF3B2-202ENST00000524475 RPGRIP1LQ68CZ1 1315 aa22.26■■□□□ 1.15
SF3B2-202ENST00000524475 DIP2AQ14689 1571 aa22.25■■□□□ 1.15
SF3B2-202ENST00000524475 CPS1P31327 1500 aa22.24■■□□□ 1.15
SF3B2-202ENST00000524475 IQSEC2Q5JU85 1478 aa22.23■■□□□ 1.15
SF3B2-202ENST00000524475 PPP1R15AO75807 674 aaPredicted RBP22.23■■□□□ 1.15
SF3B2-202ENST00000524475 SETBP1Q9Y6X0 1596 aa22.23■■□□□ 1.15
SF3B2-202ENST00000524475 ZNF335Q9H4Z2 1342 aaPredicted RBP22.23■■□□□ 1.15
SF3B2-202ENST00000524475 PPLO60437 1756 aa22.22■■□□□ 1.15
SF3B2-202ENST00000524475 ZNF326Q5BKZ1 582 aaKnown RBP22.22■■□□□ 1.15
SF3B2-202ENST00000524475 IFT172Q9UG01 1749 aa22.2■■□□□ 1.14
SF3B2-202ENST00000524475 ADAMTS13Q76LX8 1427 aa22.19■■□□□ 1.14
SF3B2-202ENST00000524475 NRXN3Q9Y4C0 1643 aa22.19■■□□□ 1.14
SF3B2-202ENST00000524475 CERKQ8TCT0 537 aa22.18■■□□□ 1.14
SF3B2-202ENST00000524475 TBX22Q9Y458 520 aa22.18■■□□□ 1.14
SF3B2-202ENST00000524475 STRCP1A6NGW2 1772 aa22.17■■□□□ 1.14
SF3B2-202ENST00000524475 NWD1Q149M9 1564 aa22.17■■□□□ 1.14
SF3B2-202ENST00000524475 PIK3R4Q99570 1358 aa22.17■■□□□ 1.14
SF3B2-202ENST00000524475 VGFO15240 615 aaPredicted RBP22.16■■□□□ 1.14
SF3B2-202ENST00000524475 SLC26A8Q96RN1 970 aa22.14■■□□□ 1.13
SF3B2-202ENST00000524475 CHD2O14647 1828 aaKnown RBP22.14■■□□□ 1.13
SF3B2-202ENST00000524475 NUTM2DQ5VT03 806 aaPredicted RBP22.13■■□□□ 1.13
SF3B2-202ENST00000524475 NKTRP30414 1462 aaKnown RBP22.12■■□□□ 1.13
SF3B2-202ENST00000524475 MYOM2P54296 1465 aa22.11■■□□□ 1.13
SF3B2-202ENST00000524475 KCNA6P17658 529 aa22.11■■□□□ 1.13
SF3B2-202ENST00000524475 BCANQ96GW7 911 aa22.11■■□□□ 1.13
SF3B2-202ENST00000524475 DHX57Q6P158 1386 aaKnown RBP22.11■■□□□ 1.13
SF3B2-202ENST00000524475 SETD1AO15047 1707 aaKnown RBP22.1■■□□□ 1.13
SF3B2-202ENST00000524475 RGL3Q3MIN7 710 aa22.09■■□□□ 1.13
SF3B2-202ENST00000524475 LRRC7Q96NW7 1537 aa22.09■■□□□ 1.13
SF3B2-202ENST00000524475 NRXN1Q9ULB1 1477 aa22.09■■□□□ 1.13
SF3B2-202ENST00000524475 STAC3Q96MF2 364 aa22.07■■□□□ 1.12
SF3B2-202ENST00000524475 PIK3C2GO75747 1445 aa22.06■■□□□ 1.12
SF3B2-202ENST00000524475 ALKQ9UM73 1620 aa22.06■■□□□ 1.12
SF3B2-202ENST00000524475 XRN1Q8IZH2 1706 aaKnown RBP22.05■■□□□ 1.12
SF3B2-202ENST00000524475 FBXO41Q8TF61 875 aa22.04■■□□□ 1.12
SF3B2-202ENST00000524475 PRAG1Q86YV5 1406 aa22.04■■□□□ 1.12
SF3B2-202ENST00000524475 ADGRF5Q8IZF2 1346 aa22.04■■□□□ 1.12
SF3B2-202ENST00000524475 XIRP1Q702N8 1843 aaKnown RBP22.02■■□□□ 1.12
SF3B2-202ENST00000524475 PTPRUQ92729 1446 aa22.02■■□□□ 1.12
SF3B2-202ENST00000524475 LAMC1P11047 1609 aa22.02■■□□□ 1.11
SF3B2-202ENST00000524475 METP08581 1390 aa22.01■■□□□ 1.11
SF3B2-202ENST00000524475 NCOA3Q9Y6Q9 1424 aa22.01■■□□□ 1.11
SF3B2-202ENST00000524475 SENP3Q9H4L4 574 aaPredicted RBP21.99■■□□□ 1.11
SF3B2-202ENST00000524475 PCGF6Q9BYE7 350 aa21.98■■□□□ 1.11
SF3B2-202ENST00000524475 TMEM94Q12767 1356 aa21.98■■□□□ 1.11
SF3B2-202ENST00000524475 AMOTL2Q9Y2J4 779 aa21.97■■□□□ 1.11
SF3B2-202ENST00000524475 PTCH1Q13635 1447 aa21.96■■□□□ 1.11
SF3B2-202ENST00000524475 PROSER2Q86WR7 435 aaPredicted RBP21.95■■□□□ 1.1
SF3B2-202ENST00000524475 C14orf93Q9H972 538 aaKnown RBP21.94■■□□□ 1.1
SF3B2-202ENST00000524475 ASXL1Q8IXJ9 1541 aa21.94■■□□□ 1.1
SF3B2-202ENST00000524475 DCAF11Q8TEB1 546 aa21.93■■□□□ 1.1
SF3B2-202ENST00000524475 KNDC1Q76NI1 1749 aa21.92■■□□□ 1.1
SF3B2-202ENST00000524475 TECPR2O15040 1411 aa21.92■■□□□ 1.1
SF3B2-202ENST00000524475 KIAA1210Q9ULL0 1709 aa21.89■■□□□ 1.1
SF3B2-202ENST00000524475 LRPPRCP42704 1394 aaKnown RBP21.89■■□□□ 1.1
SF3B2-202ENST00000524475 TOM1O60784 492 aa21.89■■□□□ 1.09
SF3B2-202ENST00000524475 ILDR1Q86SU0 546 aaPredicted RBP21.89■■□□□ 1.09
SF3B2-202ENST00000524475 SIN3AQ96ST3 1273 aa21.89■■□□□ 1.09
SF3B2-202ENST00000524475 ABCC11Q96J66 1382 aa21.88■■□□□ 1.09
SF3B2-202ENST00000524475 UBAP1LF5GYI3 381 aa21.88■■□□□ 1.09
SF3B2-202ENST00000524475 MSH6P52701 1360 aa21.87■■□□□ 1.09
SF3B2-202ENST00000524475 ADGRB1O14514 1584 aa21.87■■□□□ 1.09
SF3B2-202ENST00000524475 CLSPNQ9HAW4 1339 aa21.87■■□□□ 1.09
SF3B2-202ENST00000524475 DCCP43146 1447 aa21.87■■□□□ 1.09
SF3B2-202ENST00000524475 YTHDC2Q9H6S0 1430 aaKnown RBP21.87■■□□□ 1.09
SF3B2-202ENST00000524475 CFAP70Q5T0N1 1121 aa21.86■■□□□ 1.09
SF3B2-202ENST00000524475 ROBO2Q9HCK4 1378 aa21.86■■□□□ 1.09
SF3B2-202ENST00000524475 KDM2AQ9Y2K7 1162 aa21.85■■□□□ 1.09
SF3B2-202ENST00000524475 L3MBTL2Q969R5 705 aa21.84■■□□□ 1.09
SF3B2-202ENST00000524475 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.83■■□□□ 1.09
SF3B2-202ENST00000524475 ADGRL3Q9HAR2 1447 aa21.83■■□□□ 1.09
SF3B2-202ENST00000524475 SIRT1Q96EB6 747 aa21.83■■□□□ 1.09
SF3B2-202ENST00000524475 C19orf44Q9H6X5 657 aa21.83■■□□□ 1.09
SF3B2-202ENST00000524475 FAM135BQ49AJ0 1406 aa21.82■■□□□ 1.08
SF3B2-202ENST00000524475 DLC1Q96QB1 1528 aa21.82■■□□□ 1.08
SF3B2-202ENST00000524475 NALCNQ8IZF0 1738 aa21.81■■□□□ 1.08
SF3B2-202ENST00000524475 NEUROD1Q13562 356 aa21.81■■□□□ 1.08
SF3B2-202ENST00000524475 TMEM132EQ6IEE7 984 aa21.81■■□□□ 1.08
SF3B2-202ENST00000524475 RBM33Q96EV2 1170 aaKnown RBP21.81■■□□□ 1.08
SF3B2-202ENST00000524475 CADPS2Q86UW7 1296 aa21.79■■□□□ 1.08
SF3B2-202ENST00000524475 C14orf37Q86TY3 774 aa21.77■■□□□ 1.08
SF3B2-202ENST00000524475 TONSLQ96HA7 1378 aa21.76■■□□□ 1.07
SF3B2-202ENST00000524475 STK26Q9P289 416 aa21.75■■□□□ 1.07
SF3B2-202ENST00000524475 CDC42BPGQ6DT37 1551 aa21.74■■□□□ 1.07
SF3B2-202ENST00000524475 TRPM1Q7Z4N2 1603 aa21.74■■□□□ 1.07
SF3B2-202ENST00000524475 ATF3P18847 181 aa21.74■■□□□ 1.07
SF3B2-202ENST00000524475 SLAIN2Q9P270 581 aa21.72■■□□□ 1.07
SF3B2-202ENST00000524475 ARHGEF28Q8N1W1 1705 aaKnown RBP21.72■■□□□ 1.07
SF3B2-202ENST00000524475 PIP4K2BP78356 416 aa21.71■■□□□ 1.07
SF3B2-202ENST00000524475 ROBO1Q9Y6N7 1651 aa21.71■■□□□ 1.07
SF3B2-202ENST00000524475 MST1RQ04912 1400 aa21.71■■□□□ 1.07
SF3B2-202ENST00000524475 TIMELESSQ9UNS1 1208 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms