RNA–Protein interactions for RNA: ENST00000524057.3

SORBS3-222, Transcript of sorbin and SH3 domain containing 3, human

TSL 3

Gene SORBS3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS3-222	ENST00000524057	RRP7BP	Q9NSQ0	103 aa		17.12	■□□□□ 0.33
SORBS3-222	ENST00000524057	KDM5A	P29375	1690 aa	Known RBP	17.1	■□□□□ 0.33
SORBS3-222	ENST00000524057	AFF2	P51816	1311 aa		17.1	■□□□□ 0.33
SORBS3-222	ENST00000524057	C14orf37	Q86TY3	774 aa		17.09	■□□□□ 0.33
SORBS3-222	ENST00000524057	CADPS2	Q86UW7	1296 aa		17.09	■□□□□ 0.33
SORBS3-222	ENST00000524057	C19orf44	Q9H6X5	657 aa		17.09	■□□□□ 0.33
SORBS3-222	ENST00000524057	NCOA3	Q9Y6Q9	1424 aa		17.08	■□□□□ 0.32
SORBS3-222	ENST00000524057	KIF15	Q9NS87	1388 aa		17.08	■□□□□ 0.32
SORBS3-222	ENST00000524057	QTRT2	Q9H974	415 aa	Known RBP	17.08	■□□□□ 0.32
SORBS3-222	ENST00000524057	SLC52A1	Q9NWF4	448 aa		17.08	■□□□□ 0.32
SORBS3-222	ENST00000524057	KANK1	Q14678	1352 aa		17.07	■□□□□ 0.32
SORBS3-222	ENST00000524057	ATF3	P18847	181 aa		17.07	■□□□□ 0.32
SORBS3-222	ENST00000524057	TBX22	Q9Y458	520 aa		17.07	■□□□□ 0.32
SORBS3-222	ENST00000524057	CHD2	O14647	1828 aa	Known RBP	17.06	■□□□□ 0.32
SORBS3-222	ENST00000524057	RBM6	P78332	1123 aa	Known RBP	17.06	■□□□□ 0.32
SORBS3-222	ENST00000524057	SHPRH	Q149N8	1683 aa		17.06	■□□□□ 0.32
SORBS3-222	ENST00000524057	AHDC1	Q5TGY3	1603 aa	Predicted RBP	17.06	■□□□□ 0.32
SORBS3-222	ENST00000524057	MYOM3	Q5VTT5	1437 aa		17.05	■□□□□ 0.32
SORBS3-222	ENST00000524057	ERBIN	Q96RT1	1412 aa		17.05	■□□□□ 0.32
SORBS3-222	ENST00000524057	NUTM2D	Q5VT03	806 aa	Predicted RBP	17.05	■□□□□ 0.32
SORBS3-222	ENST00000524057	BRINP3	Q76B58	766 aa		17.05	■□□□□ 0.32
SORBS3-222	ENST00000524057	NOS1	P29475	1434 aa		17.04	■□□□□ 0.32
SORBS3-222	ENST00000524057	PLEKHG1	Q9ULL1	1385 aa		17.04	■□□□□ 0.32
SORBS3-222	ENST00000524057	HDGF	P51858	240 aa	Known RBP	17.04	■□□□□ 0.32
SORBS3-222	ENST00000524057	RGS12	O14924	1447 aa		17.04	■□□□□ 0.32
SORBS3-222	ENST00000524057	KANK4	Q5T7N3	995 aa	Predicted RBP	17.03	■□□□□ 0.32
SORBS3-222	ENST00000524057	ADGRB3	O60242	1522 aa		17.02	■□□□□ 0.32
SORBS3-222	ENST00000524057	PPP1R15A	O75807	674 aa	Predicted RBP	17.02	■□□□□ 0.32
SORBS3-222	ENST00000524057	ZFYVE9	O95405	1425 aa		17.02	■□□□□ 0.31
SORBS3-222	ENST00000524057	LMTK2	Q8IWU2	1503 aa		17.01	■□□□□ 0.31
SORBS3-222	ENST00000524057	C8orf37	Q96NL8	207 aa		17.01	■□□□□ 0.31
SORBS3-222	ENST00000524057	ZRANB1	Q9UGI0	708 aa		17.01	■□□□□ 0.31
SORBS3-222	ENST00000524057	DIP2A	Q14689	1571 aa		17.01	■□□□□ 0.31
SORBS3-222	ENST00000524057	ABCC5	O15440	1437 aa		17	■□□□□ 0.31
SORBS3-222	ENST00000524057	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	17	■□□□□ 0.31
SORBS3-222	ENST00000524057	RIMS2	Q9UQ26	1411 aa		16.99	■□□□□ 0.31
SORBS3-222	ENST00000524057	LRRC59	Q96AG4	307 aa	Known RBP	16.99	■□□□□ 0.31
SORBS3-222	ENST00000524057	SETD5	Q9C0A6	1442 aa		16.97	■□□□□ 0.31
SORBS3-222	ENST00000524057	FOXD1	Q16676	465 aa		16.96	■□□□□ 0.31
SORBS3-222	ENST00000524057	NGLY1	Q96IV0	654 aa		16.96	■□□□□ 0.31
SORBS3-222	ENST00000524057	CHIC2	Q9UKJ5	165 aa		16.96	■□□□□ 0.31
SORBS3-222	ENST00000524057	AMOTL2	Q9Y2J4	779 aa		16.96	■□□□□ 0.31
SORBS3-222	ENST00000524057	ADAMTS13	Q76LX8	1427 aa		16.96	■□□□□ 0.3
SORBS3-222	ENST00000524057	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	16.95	■□□□□ 0.3
SORBS3-222	ENST00000524057	ATAD2	Q6PL18	1390 aa		16.94	■□□□□ 0.3
SORBS3-222	ENST00000524057	DDX17	Q92841	729 aa	Known RBP	16.94	■□□□□ 0.3
SORBS3-222	ENST00000524057	PIK3R4	Q99570	1358 aa		16.93	■□□□□ 0.3
SORBS3-222	ENST00000524057	ADAMTS2	O95450	1211 aa		16.92	■□□□□ 0.3
SORBS3-222	ENST00000524057	CHGA	P10645	457 aa	Known RBP	16.92	■□□□□ 0.3
SORBS3-222	ENST00000524057	SETBP1	Q9Y6X0	1596 aa		16.92	■□□□□ 0.3
SORBS3-222	ENST00000524057	ASXL1	Q8IXJ9	1541 aa		16.91	■□□□□ 0.3
SORBS3-222	ENST00000524057	PNPLA6	Q8IY17	1366 aa		16.9	■□□□□ 0.3
SORBS3-222	ENST00000524057	DAPK1	P53355	1430 aa		16.9	■□□□□ 0.3
SORBS3-222	ENST00000524057	VPS8	Q8N3P4	1428 aa		16.9	■□□□□ 0.3
SORBS3-222	ENST00000524057	PTPRU	Q92729	1446 aa		16.9	■□□□□ 0.3
SORBS3-222	ENST00000524057	MYO5B	Q9ULV0	1848 aa		16.9	■□□□□ 0.3
SORBS3-222	ENST00000524057	ANKRD30A	Q9BXX3	1397 aa		16.89	■□□□□ 0.3
SORBS3-222	ENST00000524057	TMEM131L	A2VDJ0	1609 aa		16.89	■□□□□ 0.29
SORBS3-222	ENST00000524057	USP21	Q9UK80	565 aa		16.89	■□□□□ 0.29
SORBS3-222	ENST00000524057	MST1R	Q04912	1400 aa		16.88	■□□□□ 0.29
SORBS3-222	ENST00000524057	CCDC125	Q86Z20	511 aa		16.88	■□□□□ 0.29
SORBS3-222	ENST00000524057	CROCC2	H7BZ55	1655 aa		16.88	■□□□□ 0.29
SORBS3-222	ENST00000524057	DCC	P43146	1447 aa		16.87	■□□□□ 0.29
SORBS3-222	ENST00000524057	RPRD2	Q5VT52	1461 aa	Known RBP	16.87	■□□□□ 0.29
SORBS3-222	ENST00000524057	TRPC5	Q9UL62	973 aa	Predicted RBP	16.87	■□□□□ 0.29
SORBS3-222	ENST00000524057	NHSL1	Q5SYE7	1610 aa		16.85	■□□□□ 0.29
SORBS3-222	ENST00000524057	GCC2	Q8IWJ2	1684 aa		16.85	■□□□□ 0.29
SORBS3-222	ENST00000524057	FNBP4	Q8N3X1	1017 aa	Predicted RBP	16.85	■□□□□ 0.29
SORBS3-222	ENST00000524057	PTPN23	Q9H3S7	1636 aa		16.84	■□□□□ 0.29
SORBS3-222	ENST00000524057	TRPM2	O94759	1503 aa		16.82	■□□□□ 0.28
SORBS3-222	ENST00000524057	EP400	Q96L91	3159 aa		16.82	■□□□□ 0.28
SORBS3-222	ENST00000524057	ATRN	O75882	1429 aa		16.79	■□□□□ 0.28
SORBS3-222	ENST00000524057	SOS2	Q07890	1332 aa	Predicted RBP	16.78	■□□□□ 0.28
SORBS3-222	ENST00000524057	ANKRD50	Q9ULJ7	1429 aa		16.77	■□□□□ 0.27
SORBS3-222	ENST00000524057	MET	P08581	1390 aa		16.77	■□□□□ 0.27
SORBS3-222	ENST00000524057	ORAI2	Q96SN7	254 aa		16.76	■□□□□ 0.27
SORBS3-222	ENST00000524057	PTCH1	Q13635	1447 aa		16.76	■□□□□ 0.27
SORBS3-222	ENST00000524057	GJD4	Q96KN9	370 aa	Predicted RBP	16.75	■□□□□ 0.27
SORBS3-222	ENST00000524057	UNC13B	O14795	1591 aa		16.75	■□□□□ 0.27
SORBS3-222	ENST00000524057	C1orf167	Q5SNV9	1468 aa		16.74	■□□□□ 0.27
SORBS3-222	ENST00000524057	XRN1	Q8IZH2	1706 aa	Known RBP	16.74	■□□□□ 0.27
SORBS3-222	ENST00000524057	ADGRL3	Q9HAR2	1447 aa		16.74	■□□□□ 0.27
SORBS3-222	ENST00000524057	DEFB132	Q7Z7B7	95 aa		16.74	■□□□□ 0.27
SORBS3-222	ENST00000524057	ADGRL2	O95490	1459 aa		16.73	■□□□□ 0.27
SORBS3-222	ENST00000524057	BCL9L	Q86UU0	1499 aa		16.73	■□□□□ 0.27
SORBS3-222	ENST00000524057	BLM	P54132	1417 aa	Predicted RBP	16.7	■□□□□ 0.26
SORBS3-222	ENST00000524057	NRXN3	Q9Y4C0	1643 aa		16.7	■□□□□ 0.26
SORBS3-222	ENST00000524057	LAMC1	P11047	1609 aa		16.69	■□□□□ 0.26
SORBS3-222	ENST00000524057		E9PCH4	1651 aa		16.69	■□□□□ 0.26
SORBS3-222	ENST00000524057	APLP2	Q06481	763 aa		16.68	■□□□□ 0.26
SORBS3-222	ENST00000524057	FAM50A	Q14320	339 aa	Known RBP	16.67	■□□□□ 0.26
SORBS3-222	ENST00000524057	ZNF326	Q5BKZ1	582 aa	Known RBP	16.67	■□□□□ 0.26
SORBS3-222	ENST00000524057	NALCN	Q8IZF0	1738 aa		16.66	■□□□□ 0.26
SORBS3-222	ENST00000524057	SF3B2	Q13435	895 aa	Known RBP	16.65	■□□□□ 0.26
SORBS3-222	ENST00000524057	MYOM2	P54296	1465 aa		16.65	■□□□□ 0.26
SORBS3-222	ENST00000524057	PSD	A5PKW4	1024 aa	Predicted RBP	16.64	■□□□□ 0.25
SORBS3-222	ENST00000524057	UNC5CL	Q8IV45	518 aa		16.64	■□□□□ 0.25
SORBS3-222	ENST00000524057	COL22A1	Q8NFW1	1626 aa	Predicted RBP	16.63	■□□□□ 0.25
SORBS3-222	ENST00000524057	HRC	P23327	699 aa		16.63	■□□□□ 0.25
SORBS3-222	ENST00000524057	LRP5	O75197	1615 aa		16.63	■□□□□ 0.25

Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms