RNA–Protein interactions for RNA: ENST00000523939.1

ALKAL1-202, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ALKAL1, Length 536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-202ENST00000523939 DMRT2Q9Y5R5 561 aa28.39■■■□□ 2.14
ALKAL1-202ENST00000523939 CHGAP10645 457 aaKnown RBP28.38■■■□□ 2.13
ALKAL1-202ENST00000523939 NEXMIFQ5QGS0 1516 aa28.36■■■□□ 2.13
ALKAL1-202ENST00000523939 EID1Q9Y6B2 187 aa28.35■■■□□ 2.13
ALKAL1-202ENST00000523939 NPHP4O75161 1426 aaPredicted RBP28.35■■■□□ 2.13
ALKAL1-202ENST00000523939 RPGRIP1LQ68CZ1 1315 aa28.33■■■□□ 2.13
ALKAL1-202ENST00000523939 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.32■■■□□ 2.12
ALKAL1-202ENST00000523939 IQGAP1P46940 1657 aa28.32■■■□□ 2.12
ALKAL1-202ENST00000523939 HDGFP51858 240 aaKnown RBP28.31■■■□□ 2.12
ALKAL1-202ENST00000523939 PLEKHG1Q9ULL1 1385 aa28.3■■■□□ 2.12
ALKAL1-202ENST00000523939 PPLO60437 1756 aa28.27■■■□□ 2.12
ALKAL1-202ENST00000523939 IFT172Q9UG01 1749 aa28.27■■■□□ 2.12
ALKAL1-202ENST00000523939 ZNF326Q5BKZ1 582 aaKnown RBP28.27■■■□□ 2.12
ALKAL1-202ENST00000523939 RGL3Q3MIN7 710 aa28.23■■■□□ 2.11
ALKAL1-202ENST00000523939 NUTM2DQ5VT03 806 aaPredicted RBP28.23■■■□□ 2.11
ALKAL1-202ENST00000523939 ADAMTS13Q76LX8 1427 aa28.22■■■□□ 2.11
ALKAL1-202ENST00000523939 NRXN3Q9Y4C0 1643 aa28.21■■■□□ 2.11
ALKAL1-202ENST00000523939 SETBP1Q9Y6X0 1596 aa28.21■■■□□ 2.11
ALKAL1-202ENST00000523939 VGFO15240 615 aaPredicted RBP28.2■■■□□ 2.1
ALKAL1-202ENST00000523939 SIN3AQ96ST3 1273 aa28.19■■■□□ 2.1
ALKAL1-202ENST00000523939 PPP1R15AO75807 674 aaPredicted RBP28.18■■■□□ 2.1
ALKAL1-202ENST00000523939 NRXN1Q9ULB1 1477 aa28.18■■■□□ 2.1
ALKAL1-202ENST00000523939 TBX22Q9Y458 520 aa28.17■■■□□ 2.1
ALKAL1-202ENST00000523939 LTBP4Q8N2S1 1624 aa28.17■■■□□ 2.1
ALKAL1-202ENST00000523939 MYOM2P54296 1465 aa28.16■■■□□ 2.1
ALKAL1-202ENST00000523939 DIP2AQ14689 1571 aa28.15■■■□□ 2.1
ALKAL1-202ENST00000523939 ADGRF5Q8IZF2 1346 aa28.15■■■□□ 2.1
ALKAL1-202ENST00000523939 SLC26A8Q96RN1 970 aa28.14■■■□□ 2.1
ALKAL1-202ENST00000523939 ZNF335Q9H4Z2 1342 aaPredicted RBP28.13■■■□□ 2.09
ALKAL1-202ENST00000523939 STAC3Q96MF2 364 aa28.12■■■□□ 2.09
ALKAL1-202ENST00000523939 PIK3C2GO75747 1445 aa28.1■■■□□ 2.09
ALKAL1-202ENST00000523939 SETD1AO15047 1707 aaKnown RBP28.1■■■□□ 2.09
ALKAL1-202ENST00000523939 CLSPNQ9HAW4 1339 aa28.1■■■□□ 2.09
ALKAL1-202ENST00000523939 STRCP1A6NGW2 1772 aa28.09■■■□□ 2.09
ALKAL1-202ENST00000523939 PIK3R4Q99570 1358 aa28.08■■■□□ 2.09
ALKAL1-202ENST00000523939 ALKQ9UM73 1620 aa28.07■■■□□ 2.08
ALKAL1-202ENST00000523939 DCAF11Q8TEB1 546 aa28.06■■■□□ 2.08
ALKAL1-202ENST00000523939 CHD2O14647 1828 aaKnown RBP28.05■■■□□ 2.08
ALKAL1-202ENST00000523939 NWD1Q149M9 1564 aa28.05■■■□□ 2.08
ALKAL1-202ENST00000523939 METP08581 1390 aa28.04■■■□□ 2.08
ALKAL1-202ENST00000523939 KCNA6P17658 529 aa28.04■■■□□ 2.08
ALKAL1-202ENST00000523939 L3MBTL2Q969R5 705 aa28.04■■■□□ 2.08
ALKAL1-202ENST00000523939 BCANQ96GW7 911 aa28.04■■■□□ 2.08
ALKAL1-202ENST00000523939 SENP3Q9H4L4 574 aaPredicted RBP28.04■■■□□ 2.08
ALKAL1-202ENST00000523939 NEUROD1Q13562 356 aa28.03■■■□□ 2.08
ALKAL1-202ENST00000523939 PTPRUQ92729 1446 aa28.02■■■□□ 2.08
ALKAL1-202ENST00000523939 CPS1P31327 1500 aa28.02■■■□□ 2.08
ALKAL1-202ENST00000523939 C14orf93Q9H972 538 aaKnown RBP28.01■■■□□ 2.07
ALKAL1-202ENST00000523939 KDM2AQ9Y2K7 1162 aa27.98■■■□□ 2.07
ALKAL1-202ENST00000523939 PRAG1Q86YV5 1406 aa27.97■■■□□ 2.07
ALKAL1-202ENST00000523939 ASXL1Q8IXJ9 1541 aa27.97■■■□□ 2.07
ALKAL1-202ENST00000523939 XRN1Q8IZH2 1706 aaKnown RBP27.96■■■□□ 2.07
ALKAL1-202ENST00000523939 LRRC7Q96NW7 1537 aa27.96■■■□□ 2.07
ALKAL1-202ENST00000523939 LAMC1P11047 1609 aa27.95■■■□□ 2.06
ALKAL1-202ENST00000523939 NKTRP30414 1462 aaKnown RBP27.95■■■□□ 2.06
ALKAL1-202ENST00000523939 CFAP70Q5T0N1 1121 aa27.94■■■□□ 2.06
ALKAL1-202ENST00000523939 CERKQ8TCT0 537 aa27.93■■■□□ 2.06
ALKAL1-202ENST00000523939 IQSEC2Q5JU85 1478 aa27.92■■■□□ 2.06
ALKAL1-202ENST00000523939 AMOTL2Q9Y2J4 779 aa27.92■■■□□ 2.06
ALKAL1-202ENST00000523939 ADGRB1O14514 1584 aa27.91■■■□□ 2.06
ALKAL1-202ENST00000523939 CCER1Q8TC90 406 aaPredicted RBP27.91■■■□□ 2.06
ALKAL1-202ENST00000523939 XIRP1Q702N8 1843 aaKnown RBP27.88■■■□□ 2.05
ALKAL1-202ENST00000523939 KIAA1210Q9ULL0 1709 aa27.88■■■□□ 2.05
ALKAL1-202ENST00000523939 TONSLQ96HA7 1378 aa27.87■■■□□ 2.05
ALKAL1-202ENST00000523939 TECPR2O15040 1411 aa27.87■■■□□ 2.05
ALKAL1-202ENST00000523939 TIMELESSQ9UNS1 1208 aa27.87■■■□□ 2.05
ALKAL1-202ENST00000523939 LRPPRCP42704 1394 aaKnown RBP27.86■■■□□ 2.05
ALKAL1-202ENST00000523939 TMEM132EQ6IEE7 984 aa27.86■■■□□ 2.05
ALKAL1-202ENST00000523939 ABCC11Q96J66 1382 aa27.86■■■□□ 2.05
ALKAL1-202ENST00000523939 PTCH1Q13635 1447 aa27.84■■■□□ 2.05
ALKAL1-202ENST00000523939 YTHDC2Q9H6S0 1430 aaKnown RBP27.84■■■□□ 2.05
ALKAL1-202ENST00000523939 NCOA3Q9Y6Q9 1424 aa27.84■■■□□ 2.05
ALKAL1-202ENST00000523939 TMEM94Q12767 1356 aa27.83■■■□□ 2.05
ALKAL1-202ENST00000523939 NBPF8Q3BBV2 869 aa27.82■■■□□ 2.04
ALKAL1-202ENST00000523939 PROSER2Q86WR7 435 aaPredicted RBP27.82■■■□□ 2.04
ALKAL1-202ENST00000523939 ROBO2Q9HCK4 1378 aa27.82■■■□□ 2.04
ALKAL1-202ENST00000523939 KNDC1Q76NI1 1749 aa27.81■■■□□ 2.04
ALKAL1-202ENST00000523939 SIRT1Q96EB6 747 aa27.8■■■□□ 2.04
ALKAL1-202ENST00000523939 TRPM1Q7Z4N2 1603 aa27.79■■■□□ 2.04
ALKAL1-202ENST00000523939 NBPF1Q3BBV0 1214 aa27.78■■■□□ 2.04
ALKAL1-202ENST00000523939 RBM33Q96EV2 1170 aaKnown RBP27.76■■■□□ 2.03
ALKAL1-202ENST00000523939 DLC1Q96QB1 1528 aa27.76■■■□□ 2.03
ALKAL1-202ENST00000523939 FAM135BQ49AJ0 1406 aa27.75■■■□□ 2.03
ALKAL1-202ENST00000523939 GPRASP1Q5JY77 1395 aa27.73■■■□□ 2.03
ALKAL1-202ENST00000523939 STK26Q9P289 416 aa27.72■■■□□ 2.03
ALKAL1-202ENST00000523939 RALGAPBQ86X10 1494 aa27.69■■■□□ 2.02
ALKAL1-202ENST00000523939 WAPLQ7Z5K2 1190 aa27.68■■■□□ 2.02
ALKAL1-202ENST00000523939 PLEKHH1Q9ULM0 1364 aa27.68■■■□□ 2.02
ALKAL1-202ENST00000523939 C19orf44Q9H6X5 657 aa27.67■■■□□ 2.02
ALKAL1-202ENST00000523939 ADGRL3Q9HAR2 1447 aa27.67■■■□□ 2.02
ALKAL1-202ENST00000523939 NALCNQ8IZF0 1738 aa27.66■■■□□ 2.02
ALKAL1-202ENST00000523939 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.66■■■□□ 2.02
ALKAL1-202ENST00000523939 ARHGEF28Q8N1W1 1705 aaKnown RBP27.64■■■□□ 2.02
ALKAL1-202ENST00000523939 TRAK1Q9UPV9 953 aa27.64■■■□□ 2.02
ALKAL1-202ENST00000523939 DCCP43146 1447 aa27.64■■■□□ 2.02
ALKAL1-202ENST00000523939 MSH6P52701 1360 aa27.63■■■□□ 2.01
ALKAL1-202ENST00000523939 PRAM1Q96QH2 718 aa27.62■■■□□ 2.01
ALKAL1-202ENST00000523939 ROCK2O75116 1388 aaKnown RBP27.61■■■□□ 2.01
ALKAL1-202ENST00000523939 FBXO41Q8TF61 875 aa27.61■■■□□ 2.01
ALKAL1-202ENST00000523939 TOM1O60784 492 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms